LOC120564044


Basic Information

Item Value
gene id LOC120564044
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 39474362 ~ 39493938 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039808677.1
ATAAAGTTtcagtattatatatatatataaatattctgGTCACTTACTTAATCTGTTAACTGTGTAGTAATGGGTTTTTAAGCTCACGCTCGACAAAGACAGGGACCCAAAGAGGAAACACACTTCACTGCTCAGACCACACTGAAGCTGACTTCTCACCAAATATCAAGCAGACGCAGAGGATGCAGCAAATGGAGGTATCTGATTATGTTAATGAGTCACCGAGACCAAAGCAGAAAGGCAGTGGGGATGCAAATCAAACAGAGAGAAGACTCTGCCAGATGGTTGTCTTCAGCTTTGGGCTGCTGTGCGTCATACAAGCCATTCTCAATGTTTCTCTACGCCTGACATTTTCAGATGTTGAGGCTGGTTTCAAAAACCTGACTGAGGAGAGAGATGACCTGAAGAGGAAGCTGAATAAATCTGTTTCAGAGAGAGACACCTTGAAGAGAACCAACTTGAATGTTGAGGCTCGTTTCAAAACCCTGACTGAGGAGAGTGATGACCTGAACAGGAAGCTGAATAACGTAGCTCAAGGAGGATGGGAGTATTTCAGCGGTAGTTTCTACTACATTTCTTCTGTCAAGAAAACCTGGAATGAGAGTAGAGATGACTGTCTTCAAAAGGGTGCAGACCTGGTGATTATCAACAGCAAAGaagaacagaattTCACAATAAAGTTTGAGAAGAGACTGTGGATTGGCCTGACTGACTCAGAGACAGAGGGGACGTGGAAATGGGTGGATGGGACTCCACTGACCAAAAGctactGGGTTTCTGGGGAGCCTAACGATGAGTACGGTGAAGACTGTGGGGAAATAAGtcattttcattcagaaaacAGCTGGAATGATGTAAGCTGTTCCTTTCCACTCAACTGGATCTGTGAAATGAAAGTCCGTCCATAACTCTGaaaccaaacccaccagacagAAAACTAAGGATGATAAATATATTGCTGATACAATTTAAATCTTCTCAAAAGCAACCTGAATATGCTCATGTGAACACATCATTTCCAAGTGAAAATCATTTCCAGCTCAGTGTGAGATAATCTGAAGCCTGGTTATTTGCGCTGCAGTAAAGTGACCTGTTAACATCTAGAAACAAATGTCCAACAAGGGTCACTGTTTTGgctgaaaaaagaagaaaaaactacaATATGTAATACATACTTTGATTTATTGCTTGCTGAATGAATGTATAAATGT
>XM_039808678.1
TATAAAGTTtcagtattatatatatatataaatattctgGTCACTTACTTAATCTGTTAACTGTGTAGTAATGGGTTTTTAAGCTCACGCTCGACAAAGACAGGGACCCAAAGAGGAAACACACTTCACTGCTCAGACCACACTGAAGCTGACTTCTCACCAAATATCAAGCAGACGCAGAGGATGCAGCAAATGGAGGTATCTGATTATGTTAATGAGTCACCGAGACCAAAGCAGAAAGGCAGTGGGGATGCAAATCAAACAGAGAGAAGACTCTGCCAGATGGTTGTCTTCAGCTTTGGGCTGCTGTGCGTCATACAAGCCATTCTCAATGTTTCTCTACGCCTGACATTTTCAGATGTTGAGGCTGGTTTCAAAAACCTGACTGAGGAGAGAGATGACCTGAAGAGGAAGCTGAATAAATCTGTTTCAGAGAGAGACACCTTGAAGAGAACCAACTTGAATGTTGAGGCTCGTTTCAAAACCCTGACTGAGGAGAGTGATGACCTGAACAGGAAGCTGAATAACGTAGGAGGATGGGAGTATTTCAGCGGTAGTTTCTACTACATTTCTTCTGTCAAGAAAACCTGGAATGAGAGTAGAGATGACTGTCTTCAAAAGGGTGCAGACCTGGTGATTATCAACAGCAAAGaagaacagaattTCACAATAAAGTTTGAGAAGAGACTGTGGATTGGCCTGACTGACTCAGAGACAGAGGGGACGTGGAAATGGGTGGATGGGACTCCACTGACCAAAAGctactGGGTTTCTGGGGAGCCTAACGATGAGTACGGTGAAGACTGTGGGGAAATAAGtcattttcattcagaaaacAGCTGGAATGATGTAAGCTGTTCCTTTCCACTCAACTGGATCTGTGAAATGAAAGTCCGTCCATAACTCTGaaaccaaacccaccagacagAAAACTAAGGATGATAAATATATTGCTGATACAATTTAAATCTTCTCAAAAGCAACCTGAATATGCTCATGTGAACACATCATTTCCAAGTGAAAATCATTTCCAGCTCAGTGTGAGATAATCTGAAGCCTGGTTATTTGCGCTGCAGTAAAGTGACCTGTTAACATCTAGAAACAAATGTCCAACAAGGGTCACTGTTTTGgctgaaaaaagaagaaaaaactacaATATGTAATACATACTTTGATTTATTGCTTGCTGAATGAATGTATAAATGT
>XM_039808680.1
TATAAAGTTtcagtattatatatatatataaatattctgGTCACTTACTTAATCTGTTAACTGTGTAGTAATGGGTTTTTAAGCTCACGCTCGACAAAGACAGGGACCCAAAGAGGAAACACACTTCACTGCTCAGACCACACTGAAGCTGACTTCTCACCAAATATCAAGCAGACGCAGAGGATGCAGCAAATGGAGGTATCTGATTATGTTAATGAGTCACCGAGACCAAAGCAGAAAGGCAGTGGGGATGCAAATCAAACAGAGAGAAGACTCTGCCAGATGGTTGTCTTCAGCTTTGGGCTGCTGTGCGTCATACAAGCCATTCTCAATGTTTCTCTACGCCTGACATTTTCAGATGTTGAGGCTGGTTTCAAAAACCTGACTGAGGAGAGAGATGACCTGAAGAGGAAGCTGAATAAATCTGTTTCAGAGAGAGACACCTTGAAGAGAACCAACTTGAATGTTGAGGCTCGTTTCAAAACCCTGACTGAGGAGAGTGATGACCTGAACAGGAAGCTGAATAACGTAGCTCAAGGAGGATGGGAGTATTTCAGCGGTAGTTTCTACTACATTTCTTCTGTCAAGAAAACCTGGAATGAGAGTAGAGATGACTGTCTTCAAAAGGGTGCAGACCTGGTGATTATCAACAGCAAAGaagaacagTTTGAGAAGAGACTGTGGATTGGCCTGACTGACTCAGAGACAGAGGGGACGTGGAAATGGGTGGATGGGACTCCACTGACCAAAAGctactGGGTTTCTGGGGAGCCTAACGATGAGTACGGTGAAGACTGTGGGGAAATAAGtcattttcattcagaaaacAGCTGGAATGATGTAAGCTGTTCCTTTCCACTCAACTGGATCTGTGAAATGAAAGTCCGTCCATAACTCTGaaaccaaacccaccagacagAAAACTAAGGATGATAAATATATTGCTGATACAATTTAAATCTTCTCAAAAGCAACCTGAATATGCTCATGTGAACACATCATTTCCAAGTGAAAATCATTTCCAGCTCAGTGTGAGATAATCTGAAGCCTGGTTATTTGCGCTGCAGTAAAGTGACCTGTTAACATCTAGAAACAAATGTCCAACAAGGGTCACTGTTTTGgctgaaaaaagaagaaaaaactacaATATGTAATACATACTTTGATTTATTGCTTGCTGAATGAATGTATAAATGT

Function

GO: NA

KEGG:

id description
K06561 CD207; CD207 antigen

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039808677.1 True 1211 mRNA 0.41 8 39474363 39493938
XM_039808678.1 False 1206 mRNA 0.41 8 39474362 39493938
XM_039808680.1 False 1197 mRNA 0.41 8 39474362 39493938

Neighbor

gene id symbol gene type direction distance location
LOC120564312 NA coding upstream 62499 39404550 ~ 39411863 (+)
pard6a pard6a,LOC103379842 coding upstream 186135 39260389 ~ 39288227 (+)
LOC120564171 LOC102799927 coding upstream 455577 38897554 ~ 39018785 (+)
LOC120564709 klhl25,LOC102204243,LOC100689762 coding upstream 705788 38744888 ~ 38768574 (+)
zgc:110789 LOC104944311,LOC103365863,LOC100700474 coding upstream 734065 38725507 ~ 38740297 (+)
LOC120564047 NA coding downstream 4302 39498240 ~ 39506583 (+)
LOC120564045 NA coding downstream 21197 39515135 ~ 39528042 (+)
LOC120564046 NA coding downstream 34314 39528252 ~ 39535940 (+)
cfdp1 cfdp1,LOC105419833 coding downstream 78476 39572414 ~ 39597068 (+)
bcar1 LOC104967430 coding downstream 110303 39604241 ~ 39687049 (+)
G90948 NA non-coding upstream 48176 39425296 ~ 39426186 (+)
G90931 NA non-coding upstream 96268 39377894 ~ 39378094 (+)
G90929 NA non-coding upstream 107421 39366631 ~ 39366941 (+)
G90927 NA non-coding upstream 107787 39366296 ~ 39366575 (+)
G90875 NA non-coding upstream 279828 39193745 ~ 39194534 (+)
G90957 NA non-coding downstream 13090 39507028 ~ 39511918 (+)
G91002 NA non-coding downstream 196541 39690479 ~ 39693930 (+)
G91028 NA non-coding downstream 209384 39703322 ~ 39703733 (+)
G91034 NA non-coding downstream 260680 39754618 ~ 39757562 (+)
G91059 NA non-coding downstream 349467 39843405 ~ 39863155 (+)
G90693 NA other upstream 594460 38877050 ~ 38879902 (+)
G90686 NA other upstream 794275 38658366 ~ 38680087 (+)
G90583 NA other upstream 1418798 38054509 ~ 38055564 (+)
wfdc1 wfdc1,LOC102778323 other upstream 1439668 38022377 ~ 38034694 (+)
mt2 NA other upstream 2942366 36530973 ~ 36531996 (+)
LOC120563436 NA other downstream 377752 39871690 ~ 39874177 (+)
LOC120564712 LOC108250350,LOC108250755 other downstream 978910 40472848 ~ 40502827 (+)
gins3 gins3 other downstream 1209243 40703181 ~ 40710433 (+)
smpd3 smpd3,LOC102789354 other downstream 1373783 40867721 ~ 40950165 (+)
LOC120563418 LOC101477895,LOC102304763,LOC106675229,LOC102199463 other downstream 1459568 40953506 ~ 40955947 (+)

Expression


Co-expression Network