LOC120564045


Basic Information

Item Value
gene id LOC120564045
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 39515135 ~ 39528042 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039808681.1
AAGAGGAAACACACTTCACTGCTGAGACCACGCTGAAGCTGACTTCTCACCAAATATCAAGCAGACGCAGAGGATGCAGCAAATGGAGGTATCTGATTATGTTAATGAGCGACCGAGACCAAAGCAGAAAGGCAGTGGGGATGCAAATCAAACAGtttcagaaactgtcacaGCAGGGAGTGGAGTAAcaacagacccctcatcctcctctttggatttgagacaagAGAGAAGACTCTGCCAGGTGCTTCTCCTCAGCTTTGGGCTTCTGTGCGTCATACAAGCCATTCTCAATGTTTCTCTACGCCTGACATTATACTCTACCCACTTGGACTGCAACGCAACAAATTTTAGTTACCAAGACAAGGTGAAGAAAGTGCAGAAGGATTGTGAAGGAGAGCCACCTGGTCAGTGCAACGGATTAAAAGAACGATTCAACGCTTTGACGCGAGACAAAAACGATCTGGAAAACAGAAACTCTGAGCTCAACAACATGATCAAGgacctggaggaggagagggacaggcTGAGGACTAATCCGGAGAAAGATGTTGAGGCTCGTTTCAAAAACCTGACTGAGGAGAGAGATGACCTGAAGAGGAAGCTGAATAACTTAGGTCAAGGAGGATGGGAGTATTTCAGCGGTAAATTCTACTACAGTTCTTCTATGGAGAAAACCTGGCAAGAGAGTAGAGATGACTGTCTTCAAAAGGGTGCAGACCTGATGATTATCAACAGCAAAGaagaacaggatTTCACAAGAAAATATCAGAAGAGACTGTGGATTGGCCTGACTGACTCAGAGACAGAGGGGATGTGGAAATGGGTGGATGGGACTCCACTGACCAAAAGctACTGGGATTCCGGGGAGCCTAACGGTGAAGAAAGTGAAAACTGTGGgcaaatatttaattataatttgGAAAACAGCTGGAATGATGAAAGCTGTTCCAGCTCAGTGTACTGGATCTGTGTAATGAAAGTCCGTCCATAACTCTGcaaccaaacccaccagacagaaaacttaataaataaattgctgTTTTTCTATAGTTCAGTGCAAATTTATATTTTCACAAAAGCAACCTGAATATGCTCATGTGGACACATCATTTCCAAGTGAAAATCATTTCCAGCTCAGTGTGAGATAATCTGAAGCCTGGTTATATTCCGCTGCAGTAAAGTGACCTGTTAACATCTAGAAACAAATGTCCAACGAGGGTCACTTCtttggctgaaaaaaaaatgaaaagaactgcaatatgtaatacatgCTTTGATTTATTACTTGCTGAATGAATGTATAAATGTTTATGGGTGGGAGGGGGGATGTGTTCTTCCAGCCACATCACAGCAGGGTGGCAGGGGGGGGGTCTAGTCCTGTCTCATTGGTTTAGTTATGACCTGTTTTCTTTGTCACtatgttgtattattattagggctgtcaaaattaacgcgttaattttccgttaattttttaatatttaactcgttaacaAAAATGAacgaaattaacgca
>XM_039808682.1
AAGAGGAAACACACTTCACTGCTGAGACCACGCTGAAGCTGACTTCTCACCAAATATCAAGCAGACGCAGAGGATGCAGCAAATGGAGGTATCTGATTATGTTAATGAGCGACCGAGACCAAAGCAGAAAGGCAGTGGGGATGCAAATCAAACAGAGAGAAGACTCTGCCAGGTGCTTCTCCTCAGCTTTGGGCTTCTGTGCGTCATACAAGCCATTCTCAATGTTTCTCTACGCCTGACATTATACTCTACCCACTTGGACTGCAACGCAACAAATTTTAGTTACCAAGACAAGGTGAAGAAAGTGCAGAAGGATTGTGAAGGAGAGCCACCTGGTCAGTGCAACGGATTAAAAGAACGATTCAACGCTTTGACGCGAGACAAAAACGATCTGGAAAACAGAAACTCTGAGCTCAACAACATGATCAAGgacctggaggaggagagggacaggcTGAGGACTAATCCGGAGAAAGATGTTGAGGCTCGTTTCAAAAACCTGACTGAGGAGAGAGATGACCTGAAGAGGAAGCTGAATAACTTAGGTCAAGGAGGATGGGAGTATTTCAGCGGTAAATTCTACTACAGTTCTTCTATGGAGAAAACCTGGCAAGAGAGTAGAGATGACTGTCTTCAAAAGGGTGCAGACCTGATGATTATCAACAGCAAAGaagaacaggatTTCACAAGAAAATATCAGAAGAGACTGTGGATTGGCCTGACTGACTCAGAGACAGAGGGGATGTGGAAATGGGTGGATGGGACTCCACTGACCAAAAGctACTGGGATTCCGGGGAGCCTAACGGTGAAGAAAGTGAAAACTGTGGgcaaatatttaattataatttgGAAAACAGCTGGAATGATGAAAGCTGTTCCAGCTCAGTGTACTGGATCTGTGTAATGAAAGTCCGTCCATAACTCTGcaaccaaacccaccagacagaaaacttaataaataaattgctgTTTTTCTATAGTTCAGTGCAAATTTATATTTTCACAAAAGCAACCTGAATATGCTCATGTGGACACATCATTTCCAAGTGAAAATCATTTCCAGCTCAGTGTGAGATAATCTGAAGCCTGGTTATATTCCGCTGCAGTAAAGTGACCTGTTAACATCTAGAAACAAATGTCCAACGAGGGTCACTTCtttggctgaaaaaaaaatgaaaagaactgcaatatgtaatacatgCTTTGATTTATTACTTGCTGAATGAATGTATAAATGTTTATGGGTGGGAGGGGGGATGTGTTCTTCCAGCCACATCACAGCAGGGTGGCAGGGGGGGGGTCTAGTCCTGTCTCATTGGTTTAGTTATGACCTGTTTTCTTTGTCACtatgttgtattattattagggctgtcaaaattaacgcgttaattttccgttaattttttaatatttaactcgttaacaAAAATGAacgaaattaacgc

Function

GO: NA

KEGG:

id description
K06561 CD207; CD207 antigen

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039808681.1 True 1519 mRNA 0.42 8 39515135 39528042
XM_039808682.1 False 1446 mRNA 0.42 7 39515135 39528041

Neighbor

gene id symbol gene type direction distance location
LOC120564047 NA coding upstream 8552 39498240 ~ 39506583 (+)
LOC120564044 NA coding upstream 21197 39474362 ~ 39493938 (+)
LOC120564312 NA coding upstream 103272 39404550 ~ 39411863 (+)
pard6a pard6a,LOC103379842 coding upstream 226908 39260389 ~ 39288227 (+)
LOC120564171 LOC102799927 coding upstream 496350 38897554 ~ 39018785 (+)
LOC120564046 NA coding downstream 210 39528252 ~ 39535940 (+)
cfdp1 cfdp1,LOC105419833 coding downstream 44372 39572414 ~ 39597068 (+)
bcar1 LOC104967430 coding downstream 76199 39604241 ~ 39687049 (+)
trnap-ugg_2 NA coding downstream 225552 39753594 ~ 39753665 (+)
ric8a ric8a coding downstream 416674 39944716 ~ 39963408 (+)
G90957 NA non-coding upstream 3217 39507028 ~ 39511918 (+)
G90960 NA non-coding upstream 21979 39445873 ~ 39493156 (+)
G90948 NA non-coding upstream 88949 39425296 ~ 39426186 (+)
G90931 NA non-coding upstream 137041 39377894 ~ 39378094 (+)
G90929 NA non-coding upstream 148194 39366631 ~ 39366941 (+)
G91002 NA non-coding downstream 162437 39690479 ~ 39693930 (+)
G91028 NA non-coding downstream 175280 39703322 ~ 39703733 (+)
G91034 NA non-coding downstream 226576 39754618 ~ 39757562 (+)
G91059 NA non-coding downstream 315363 39843405 ~ 39863155 (+)
G91050 NA non-coding downstream 346189 39874231 ~ 39875734 (+)
G90693 NA other upstream 635233 38877050 ~ 38879902 (+)
G90686 NA other upstream 835048 38658366 ~ 38680087 (+)
G90583 NA other upstream 1459571 38054509 ~ 38055564 (+)
wfdc1 wfdc1,LOC102778323 other upstream 1480441 38022377 ~ 38034694 (+)
mt2 NA other upstream 2983139 36530973 ~ 36531996 (+)
LOC120563436 NA other downstream 343648 39871690 ~ 39874177 (+)
LOC120564712 LOC108250350,LOC108250755 other downstream 944806 40472848 ~ 40502827 (+)
gins3 gins3 other downstream 1175139 40703181 ~ 40710433 (+)
smpd3 smpd3,LOC102789354 other downstream 1339679 40867721 ~ 40950165 (+)
LOC120563418 LOC101477895,LOC102304763,LOC106675229,LOC102199463 other downstream 1425464 40953506 ~ 40955947 (+)

Expression


Co-expression Network