LOC120564047



Basic Information


Item Value
gene id LOC120564047
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 39498240 ~ 39506583 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>XM_039808685.1
GAAGACAGTGACCAAAAGAGGAAACACAGTTCACTGCTCAGACCATGCTGAACCTGACTTCTCACCAAATATCAAGCAGACGCAGAGGATGCAGCAAATGGAGGTATCTGATTATGTTAATGAGCCACCGAAACCAAAGCAGAAAGGCAGTGGGGATGCTAATCAACCAGAGAGAAGACTCTGCCAGATGGTTATCTTCAGCTTTGGGCTGCTGTGCGTCATACAAGCCATTCTCAATGTTTCTCTACGCCTGACATTTTCAGATGTTGAGGCTGGTTTCAAAAACCTGACTGAGGAGAGAGATGACCTGAAGAGGAAGCTGAATAACTTAGCTCAAGGAGGATGGGAGTATTTCAGAGGTAGTTTCTACTACAGTTCTTCTATGGAGAAAACCTGGCAAGAGAGTAGAGATGACTGTCTTCAAAAGGGTGCAGACCTGATGATTATCAACAGCAAAGAAGAACAGgatTTCACAAGAAAATATCAGAAGAGACTGTGGATTGGCCTGACTGACTCAGAGACAGAGGGGATGTGGAAATGGGTGGATGGGACTCCACTGACCAAAAGctACTGGAATTCAGAGGAGCCTAACGGTGGGGAAAGGGAGAACTGTGGGCAAATATTTCATTATGATTTAGAAAACAGCTGGAATGATGAAAACTGTTCCAGCTCAGTGTACTGGATCTGTGTAATGAAAGTCCGTAGATAACTCTGCAACCAATCCGACCAGACAGAAAACTTAatagaataaataaattgcTGTTTTTCTATAGTTCAGTGCAGATTTACATTTTCACAAAAGCAACCTGAATATGCTCATGTGGACACATCATTTCCAAGTGAAAATCATTTCCAGCTCAGTGTGAGATAATCTGAAGCCTGGTTATTTGCGCTGCAGTAAAGTGACCTGTTAACATCTAGAAACAAATGTCCAACGAGGGTCACTGCTTTGgctgaaaaagaagaagaaaaaaactgcaatatgtaatacatgCTTTGATTCATTGCTTGCTGAATGAATGcataaatgtttatgtgtgCGTCTGACCACATCACAGGG

Function


GO: NA

KEGG:

id description
K06561 CD207; CD207 antigen

RNA


RNA id representative length rna type GC content exon number start site end site
XM_039808685.1 True 1060 mRNA 0.42 6 39498240 39506583

Neighbor


gene id symbol gene type direction distance location
LOC120564044 NA coding upstream 4302 39474362 ~ 39493938 (+)
LOC120564312 NA coding upstream 86377 39404550 ~ 39411863 (+)
pard6a pard6a,LOC103379842 coding upstream 210013 39260389 ~ 39288227 (+)
LOC120564171 LOC102799927 coding upstream 479455 38897554 ~ 39018785 (+)
LOC120564709 klhl25,LOC102204243,LOC100689762 coding upstream 729666 38744888 ~ 38768574 (+)
LOC120564045 NA coding downstream 8552 39515135 ~ 39528042 (+)
LOC120564046 NA coding downstream 21669 39528252 ~ 39535940 (+)
cfdp1 cfdp1,LOC105419833 coding downstream 65831 39572414 ~ 39597068 (+)
bcar1 LOC104967430 coding downstream 97658 39604241 ~ 39687049 (+)
trnap-ugg_2 NA coding downstream 247011 39753594 ~ 39753665 (+)
G90960 NA non-coding upstream 5084 39445873 ~ 39493156 (+)
G90948 NA non-coding upstream 72054 39425296 ~ 39426186 (+)
G90931 NA non-coding upstream 120146 39377894 ~ 39378094 (+)
G90929 NA non-coding upstream 131299 39366631 ~ 39366941 (+)
G90927 NA non-coding upstream 131665 39366296 ~ 39366575 (+)
G90957 NA non-coding downstream 445 39507028 ~ 39511918 (+)
G91002 NA non-coding downstream 183896 39690479 ~ 39693930 (+)
G91028 NA non-coding downstream 196739 39703322 ~ 39703733 (+)
G91034 NA non-coding downstream 248035 39754618 ~ 39757562 (+)
G91059 NA non-coding downstream 336822 39843405 ~ 39863155 (+)
G90693 NA other upstream 618338 38877050 ~ 38879902 (+)
G90686 NA other upstream 818153 38658366 ~ 38680087 (+)
G90583 NA other upstream 1442676 38054509 ~ 38055564 (+)
wfdc1 wfdc1,LOC102778323 other upstream 1463546 38022377 ~ 38034694 (+)
mt2 NA other upstream 2966244 36530973 ~ 36531996 (+)
LOC120563436 NA other downstream 365107 39871690 ~ 39874177 (+)
LOC120564712 LOC108250350,LOC108250755 other downstream 966265 40472848 ~ 40502827 (+)
gins3 gins3 other downstream 1196598 40703181 ~ 40710433 (+)
smpd3 smpd3,LOC102789354 other downstream 1361138 40867721 ~ 40950165 (+)
LOC120563418 LOC101477895,LOC102304763,LOC106675229,LOC102199463 other downstream 1446923 40953506 ~ 40955947 (+)

Expression



Co-expression Network