ldhd (ldhd)


Basic Information

Item Value
gene id ldhd
gene name ldhd
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 40613516 ~ 40633735 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039808907.1
TAGATTACTAGCTAGTAGTTAGTGACCTTGTTCGGTGCCAGGTAAACCGGTAAAACATGTTGCTTGGCTTGACACCGAGTCGACGGTTGCTGTCTCACCGACATTGCCTCCTGCAGTGTCGCAGCATTAAATCAGAAAACACCGCCAGAAGTGCTGCCCTGGACAGCGTGCTCTCTGCGTTCAGGTCTAtatgtggagaggacggcgtcTCATTGGGTGAAGCTGTCAGACAGCAACATGGTAAAGATGAGTCTGTACACAgATGTTGTCCCCCAGATGTGGTGGTGTTTCCTCGTTGTGTGGAGGAGGTCAGCGCCCTGGCCAAGGTCTGCAACAACCACCGCCTTCCCATCATCCCCTTTGGCACTGGAACCGGCCTGGAGGGAGGGGTCAGCGCAGTCACgGGTGGTGTGTGCTTCAGTCTGAGGAACATGGACCAGGTTTTGGACATCCACCAGGAGGACTTTGACGTGACGGTGGAGCCTGGTGTGACTCGGAAGGCCCTGAACGCCTACCTGCGAGACACCGGCCTATGGTTTCCTGTTGATCCCGGGGCCGATGCATCTCTGTGTGGCATGGCTGCCACGAGTGCGTCTGGTACCAATGCAGTGCGTTATGGAACTATGAGGGAAAACGTTCTAAACCTGGAGGTTGTTCTGGCTGATGGGAACATCATACACACGGCCGGAAAGGGCCGACGTCCCAGGAAGACATCTGCAGGATACAACCTGACCAACCTGTTTGTGGGGTCAGAGGGCACTCTGGGGATCATCACCAAGACTACGTTGCGCCTGTACGGCATCCCAGAGGCCATGGTGTCGGCCGTCTGCTCTTTCCCCTCTGTGCAGGCTGCCGTAGACAGCACAGTGCAGATCCTACAAGCAGGAGTACCCATCGCTCGCATCGAGTTTCTGGATGATGTGATGATTGACGCGTGCAACAGGTTCAGCTCTCTGTCCTACCCCGTGACCCCGACTCTGTTCCTGGAGTTCCACGGCTCCGAGCGAAGCCTCGAGGAACAGGTCCACACAGCTGAGGACATCACTCAGAGTAACGGTGGTTCCGATTTTCAGTGGGCTCGAGATGCAGAAACTCGGAACCGGTTGTGGAAAGCTCGCCATGACGCCTGGTACGCTGCTCTGGCTCTCAGACCTGGCTGCAAGGCTTACTCTACagatgtgtgtgtccctctgtctcGACTGCCTCAGATCATAGTGGAGACAAAGGAGGACCTGATTGAGAACAGACTCACAGGTCCCATAGCGGGTCATGTGGGTGATGGTAACTTCCACTGTCTGATGGTGGTGGACCCCAACGACCCAGAGGAGCAGCGCGGGGTCCACCTCTTCACAGAGAGACTGGCCAGGCGAGCACTGGCCATGGACGGAACATGTACGGGGGAGCACGGAGTGGGCTTAGGGAAGAGAGCACTGCTGTGTGAAGAGATGGGACCCATGGCTGTCCAGGTCATGCAGCGTCTCAAGGACACGCTCGACCCAAAGAACCTGATGAACCCTGGGAAAGTTCTGCAGCCCAGGGAACTATAAACTGCATTGGAGTCAGAGGGAAAGTCACTAAACACAGAGAATGTCATGATCGGCTTGATCAGAGACTGATGTCACAATGAGATGGCACTTTTAGAGCATATTGCACTTGAAGTATTTCCTGTTAAAACAGGACTTCTGGAAGAGGCATAACAGGAAGGGATTACTCTAGTAAAAAAACAATAGGATATCAGTTAAGGCTGTGTTAAAATAATCTATTCTCCAATTAAAAGCGATGTTTTTTTGAGTAATCTGATATCGATGTATAAAATCCAGAAATCAACCTTTCAATTTATATGCCTTTTCACCTTAAATGTATAAGTAAAAGGTACTTCAATCAAACGTTTTGGTGGTCAATTcctaatgtaaacattaacctggtgcataattaaatatatttgagtgtt
>XM_039808908.1
TAGATTACTAGCTAGTAGTTAGTGACCTTGTTCGGTGCCAGGTAAACCGGTAAAACATGTTGCTTGGCTTGACACCGAGTCGACGGTTGCTGTCTCACCGACATTGCCTCCTGCAGTGTCGCAGCATTAAATCAGAAAACACCGCCAGAAGTGCTGCCCTGGACAGCGTGCTCTCTGCGTTCAGGTCTAtatgtggagaggacggcgtcTCATTGGGTGAAGCTGTCAGACAGCAACATGGTAAAGATGAGTCTGTACACAgATGTTGTCCCCCAGATGTGGTGGTGTTTCCTCGTTGTGTGGAGGAGGTCAGCGCCCTGGCCAAGGTCTGCAACAACCACCGCCTTCCCATCATCCCCTTTGGCACTGGAACCGGCCTGGAGGGAGGGGTCAGCGCAGTCACgGGTGGTGTGTGCTTCAGTCTGAGGAACATGGACCAGGTTTTGGACATCCACCAGGAGGACTTTGACGTGACGGTGGAGCCTGGTGTGACTCGGAAGGCCCTGAACGCCTACCTGCGAGACACCGGCCTATGGTTTCCTGTTGATCCCGGGGCCGATGCATCTCTGTGTGGCATGGCTGCCACGAGTGCGTCTGGTACCAATGCAGTGCGTTATGGAACTATGAGGGAAAACGTTCTAAACCTGGAGGTTGTTCTGGCTGATGGGAACATCATACACACGGCCGGAAAGGGCCGACGTCCCAGGAAGACATCTGCAGGATACAACCTGACCAACCTGTTTGTGGGGTCAGAGGGCACTCTGGGGATCATCACCAAGACTACGTTGCGCCTGTACGGCATCCCAGAGGCCATGGTGTCGGCCGTCTGCTCTTTCCCCTCTGTGCAGGCTGCCGTAGACAGCACAGTGCAGATCCTACAAGCAGGAGTACCCATCGCTCGCATCGAGTTTCTGGATGATGTGATGATTGACGCGTGCAACAGGTTCAGCTCTCTGTCCTACCCCGTGACCCCGACTCTGTTCCTGGAGTTCCACGGCTCCGAGCGAAGCCTCGAGGAACAGGTCCACACAGCTGAGGACATCACTCAGAGTAACGGTGGTTCCGATTTTCAGTGGGCTCGAGATGCAGAAACTCGGAACCGGTTGTGGAAAGCTCGCCATGACGCCTGGTACGCTGCTCTGGCTCTCAGACCTGGCTGCAAGGCTTACTCTACagatgtgtgtgtccctctgtctcGACTGCCTCAGATCATAGTGGAGACAAAGGAGGACCTGATTGAGAACAGACTCACAGAGAAAGTTTTGGCGCCCCCAAAAGAGGTTTTAACCAGCACCAAAGGAAAACCACGTGCGTCAAAGCGTCTGATTTTCAGCAGCCAGTCTCCCTCTCATCCACAGCTGCTACATTTTACACAAAGGGCTGGCGCTGATAAGCCAGCTAAGCTGCATTGTTTTGACTGGACCTAAACGCTCCGCTGTATGGCTAGCGCTAATGGGATCTCAGTTACCGCCCAGAGTGGAACTGTGCCGGACTCTCCCAGTGAGCATGGTGCTCTGGGGACCGGCAACGCAGCGAGGAACagctgataaccgataaagttaatgaattaaaaagtgttctactttggctcggctacagct

Function

symbol description
ldhd Predicted to enable D-lactate dehydrogenase (cytochrome) activity; D-lactate dehydrogenase activity; and flavin adenine dinucleotide binding activity. Involved in lactate catabolic process. Predicted to be active in mitochondrion. Orthologous to human LDHD (lactate dehydrogenase D).

NR:

description
probable D-lactate dehydrogenase, mitochondrial isoform X1

GO: NA

KEGG:

id description
K00102 LDHD, dld; D-lactate dehydrogenase (cytochrome)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039808907.1 True 1951 mRNA 0.52 11 40613516 40633735
XM_039808908.1 False 1601 mRNA 0.55 10 40613516 40629622

Neighbor

gene id symbol gene type direction distance location
anpepa NA coding upstream 27368 40559291 ~ 40586148 (+)
si:dkey-12e7.1 LOC104959053,LOC107389248,LOC106903666,LOC100708592,LOC101482187 coding upstream 55652 40549248 ~ 40557864 (+)
LOC120564785 NA coding upstream 199036 40402108 ~ 40414480 (+)
LOC120564733 NA coding upstream 212565 40376300 ~ 40400951 (+)
dnajc24 dnajc24 coding upstream 336321 40270523 ~ 40277195 (+)
znrf1 znrf1 coding downstream 2390 40636125 ~ 40700282 (+)
ndrg4 ndrg4,LOC102790713 coding downstream 97024 40730759 ~ 40802151 (+)
si:ch211-194m7.4 LOC106675224 coding downstream 185824 40819559 ~ 40829886 (+)
LOC120564750 LOC103379930,LOC101477230,LOC103369301 coding downstream 327118 40960853 ~ 41017023 (+)
si:dkey-30c15.10 LOC103379919 coding downstream 393546 41027281 ~ 41050823 (+)
G91292 LOC107389246,LOC100694841 non-coding upstream 80299 40526743 ~ 40533217 (+)
G91288 NA non-coding upstream 93729 40518365 ~ 40519787 (+)
G91286 NA non-coding upstream 104168 40508732 ~ 40509348 (+)
G91285 NA non-coding upstream 104808 40508138 ~ 40508708 (+)
G91284 NA non-coding upstream 106222 40507057 ~ 40507294 (+)
G91358 NA non-coding downstream 79009 40712744 ~ 40712954 (+)
G91363 NA non-coding downstream 93411 40727146 ~ 40727418 (+)
G91383 NA non-coding downstream 209343 40843078 ~ 40860888 (+)
G91451 NA non-coding downstream 576769 41210504 ~ 41211799 (+)
G91465 NA non-coding downstream 705235 41338970 ~ 41339360 (+)
LOC120564712 LOC108250350,LOC108250755 other upstream 110689 40472848 ~ 40502827 (+)
LOC120563436 NA other upstream 739339 39871690 ~ 39874177 (+)
G90693 NA other upstream 1733614 38877050 ~ 38879902 (+)
G90686 NA other upstream 1933429 38658366 ~ 38680087 (+)
G90583 NA other upstream 2557952 38054509 ~ 38055564 (+)
gins3 gins3 other downstream 69446 40703181 ~ 40710433 (+)
smpd3 smpd3,LOC102789354 other downstream 233986 40867721 ~ 40950165 (+)
LOC120563418 LOC101477895,LOC102304763,LOC106675229,LOC102199463 other downstream 319771 40953506 ~ 40955947 (+)
exoc3l1 LOC106535935,LOC103369297,LOC103466291,LOC104962074,LOC101469518 other downstream 420655 41054390 ~ 41078222 (+)
LOC120564397 NA other downstream 831929 41465664 ~ 41467325 (+)

Expression


Co-expression Network