LOC120564167


Basic Information

Item Value
gene id LOC120564167
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 36465695 ~ 36489643 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039808935.1
TAGAGAGACTCACGCCACCATTAGCCACCTGTCAGTACAGGTGGAGAGAGTGACTGCTGGCCATCTGAGCCTGGAGGTTTTACTGGAGGACTCCTCTTTAACTCTTTGGGCagtttacttttctttctttcttttttacctCAAGACCtttttttagggttttattTGGACAGAACTGAACTTTAGTCTTGCTGTTGCCACCAGCATATGGAGGCCTAGTCAATGGTTACTGAATCCCAACACTCCAGTATTTTTTGAGGAGTGAAAGCTGTTGGAGGAGGATTGTTTTCATCAGTCTCAGTTCATCCTGAGACTGAATCCTTGAGGAGTTTTCTGTTGGTGTGGCTGTTACTGAGACACCCATCTTCGGATAAGCTGCGTGATCATGGCAGACTTCCCGTCCAAGGTTACCACAGAAACCAGCTCCCCCAACTCCCAGAGTTCTCAGCAGGGGGGCAACAGCCTCCGAGGGCTGGCCGCTAACGTCACCGTTATGATGGACGGGTCCTTTATCCGAAGCATTCCGGCCATCCTCATGATTGTTGAAATAaaatcgagactcatcagaccaggcaacatttttacagtcttcaactgtccaattttgCTTCTGGGGCTGCTCCAGTGGGCGTTGATAGCCGGTGCCCCCTACACTTTGCTGCCAGTGTATGGCTGGGTGATGTTTGTGGCCGTCACTCTGTGGATCCTCACCACAATCCTCTTCTTCATGATCCTGTTCGGCGCCCAGCAAAAACTCACGTTCATCCCCTGGCCCCTGGCGGTGATGGTGTATTTTGCCGGAGCCACGGTCCTCTATCTGACCGCCTTCGTGGCCAACGCAGCATCTGTGGACCCCTTCTACACTCCTTTCTATCTGCGTTTCTACCAACAAATGGCAGCAGCCGCTTTCTTCGGTGCTGTGGTGACCCTGGCGTACGGGGCCAGTGCCTTCTTCTCCTATTTGACGTGGAAGGGAGATGGGGGAAACGCTGCCACCAACACGGTGCCGACCTAGGACTCAATCCTGATCCTAGAAatagatgtgttgtgttgttttttttctcccctcaaGATACTGTATTTGTAGATAGTATTACCAATGAGATAAAGCCTAATCCAGACGAAAATATCCtatattatacagtacaggccaaaagtttggacacaccttctcattcaatgcgtttcctttttattttcatgactatttacattgtagattctcactgaa
>XM_039808936.1
AGACTCACGCCACCATTAGCCACCTGTCAGTACAGGTGGAGAGAGTGACTGCTGGCCATCTGAGCCTGGAGGTTTTACTGGAGGACTCCTCTTTAACTCTTTGGGCagtttacttttctttctttcttttttacctCAAGACCtttttttagggttttattTGGACAGAACTGAACTTTAGTCTTGCTGTTGCCACCAGCATATGGAGGCCTAGTCAATGGTTACTGAATCCCAACACTCCAGTATTTTTTGAGGAGTGAAAGCTGTTGGAGGAGGATTGTTTTCATCAGTCTCAGTTCATCCTGAGACTGAATCCTTGAGGAGTTTTCTGTTGGTGTGGCTGTTACTGAGACACCCATCTTCGGATAAGCTGCGTGATCATGGCAGACTTCCCGTCCAAGGTTACCACAGAAACCAGCTCCCCCAACTCCCAGAGTTCTCAGCAGGGGGGCAACAGCCTCCGAGGGCTGGCCGCTAACGTCACCGTTATGATGGACGGGTCCTTTATCCGAAGCATTCCGGCCATCCTCATGATTGTTGAAATACTTCTGGGGCTGCTCCAGTGGGCGTTGATAGCCGGTGCCCCCTACACTTTGCTGCCAGTGTATGGCTGGGTGATGTTTGTGGCCGTCACTCTGTGGATCCTCACCACAATCCTCTTCTTCATGATCCTGTTCGGCGCCCAGCAAAAACTCACGTTCATCCCCTGGCCCCTGGCGGTGATGGTGTATTTTGCCGGAGCCACGGTCCTCTATCTGACCGCCTTCGTGGCCAACGCAGCATCTGTGGACCCCTTCTACACTCCTTTCTATCTGCGTTTCTACCAACAAATGGCAGCAGCCGCTTTCTTCGGTGCTGTGGTGACCCTGGCGTACGGGGCCAGTGCCTTCTTCTCCTATTTGACGTGGAAGGGAGATGGGGGAAACGCTGCCACCAACACGGTGCCGACCTAGGACTCAATCCTGATCCTAGAAatagatgtgttgtgttgttttttttctcccctcaaGATACTGTATTTGTAGATAGTATTACCAATGAGATAAAGCCTAATCCAGACGAAAATATCCtatattatacagtacaggccaaaagtttggacacaccttctcattcaatgcgtttcctttttattttcatgactatttacattgtagattctcactgaa

Function

GO:

id name namespace
GO:0016020 membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039808935.1 True 1231 mRNA 0.48 5 36465695 36489643
XM_039808936.1 False 1169 mRNA 0.49 4 36465700 36489643

Neighbor

gene id symbol gene type direction distance location
trnal-cag_1 NA coding upstream 2127 36463486 ~ 36463568 (+)
tgm2l LOC103363999,LOC104953692,LOC102308322 coding upstream 7584 36445093 ~ 36458111 (+)
exosc6 exosc6 coding upstream 34306 36429502 ~ 36431389 (+)
st3gal2 st3gal2,LOC102780992 coding upstream 75432 36368761 ~ 36390263 (+)
siah1 siah1,LOC102794717 coding upstream 359245 36065628 ~ 36106450 (+)
steep1 clg7hxorf56,csgr13hxorf56,LOC104938431,LOC101478835,LOC103368976 coding downstream 44572 36534215 ~ 36535887 (+)
nup93 nup93,LOC103368977 coding downstream 54125 36543768 ~ 36577859 (+)
zpd NA coding downstream 93251 36582894 ~ 36589156 (+)
mmp15a LOC103368972,LOC102304799,LOC104953712 coding downstream 107282 36596925 ~ 36621244 (+)
LOC120564181 LOC100709340,LOC102206288,LOC101464383,LOC102303471,LOC103368978 coding downstream 136255 36625898 ~ 36662806 (+)
G90241 aars,LOC102788534 non-coding upstream 65625 36397291 ~ 36400070 (+)
G90236 NA non-coding upstream 97265 36312714 ~ 36368430 (+)
G90238 NA non-coding upstream 107477 36352310 ~ 36358218 (+)
G90218 NA non-coding upstream 210129 36255175 ~ 36255566 (+)
G90217 NA non-coding upstream 210872 36254401 ~ 36254823 (+)
LOC120563368 NA non-coding downstream 104513 36594156 ~ 36595693 (+)
G90311 NA non-coding downstream 232282 36721925 ~ 36722827 (+)
G90523 NA non-coding downstream 1208121 37697764 ~ 37697977 (+)
G90575 NA non-coding downstream 1506917 37996560 ~ 37996773 (+)
LOC120564394 NA non-coding downstream 1563262 38052905 ~ 38054178 (+)
G90142 NA other upstream 680279 35784694 ~ 35785416 (+)
LOC120563677 gnao1,LOC103367675,LOC108249535,LOC107660763,LOC100693875 other upstream 1475283 34847563 ~ 34990412 (+)
G89836 NA other upstream 2030378 34434089 ~ 34435317 (+)
G89813 NA other upstream 2044514 34381836 ~ 34421181 (+)
G89811 LOC100698998 other upstream 2103318 34360484 ~ 34362377 (+)
anapc13 anapc13 other downstream 26368 36516011 ~ 36517921 (+)
mt2 NA other downstream 41330 36530973 ~ 36531996 (+)
wfdc1 wfdc1,LOC102778323 other downstream 1532734 38022377 ~ 38034694 (+)
G90583 NA other downstream 1564866 38054509 ~ 38055564 (+)
G90686 NA other downstream 2168723 38658366 ~ 38680087 (+)

Expression


Co-expression Network