n4bp1 (n4bp1,LOC101465464)


Basic Information

Item Value
gene id n4bp1
gene name n4bp1,LOC101465464
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 36018268 ~ 36048411 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039808979.1
TTCCGGATACGTCACTCGGGGCTTCCGAGTTATTGCTAGCTCTACCTCTGTGTTCATGTCGTTTGACACTGTAAACGTCGCCTCGTTGCTCTGGAGTAAACACCAAAAGAGACCATGAAAACGCCAAAGGAGCCTAAAAGCGCCGAAAGGTTTGAATATTGAGACGTTGCTGTCTGGAGCGACGGTAGGACCGAGAAGCGGAATGTCAACAACGCGGCCCCTCCTCGGAATGAGACGAGTCACCGAGCTAGCGTGCCCGGAGCAGCCGACCAATAGGCTCCCTGCGTCAGCCGGGAAGCAGCAGCCAGAGACCCCTACCGTGGACGAGTTTACAGTGCTAGAGGATAAAGAAGATGACCTGAAGTGTGCCAAGCCTCGAGTGGAGCAGGTTTTTAAAGTCACGTTCACCATTATCGGTCTGTTGGACCACACGGGACAGCCGCACGGTAGCAAAACATCACGGCAGATATGGCTGCAGCTCAGGGGAAACCGAGACGACGTGTCAAAGGCAAAGGAATATGTCCGAGGACTCTGTGACCCAGAGCTGCAGAAAGAAGAGAGGTACCCAGTGGACATGCACTGTATCTTTGCTGGTGCCCGGGGCCTCTTCCTGGACAGGCTCATACGGGACACAAGTGCTGAAGTTGTGGTGCCTGAGCCGGGCCGCCTGCGGTTGTTGGGCCGGGCCGAACCCGTAGTGATGGCCCAGAGCAGAGTTCAGCAATTTGTAGCACTATTCCAGGAAAAGCGAAGTCTACCGAGCGACAGAGAGCCGGCAGTGAAACGAGCGTTCAAGTCCTTTGTGGAGGAAAGGGATGATAAGTACACTATGGAGCTTCTTTTGCTGCCCAGTGCCCTGAAGGAAGAGTTACTGGGACTGGCTCATAGCCCCACTACCACAAACACATCCTACCTGGTTCAGCTCAACCAGACGCTGCATCTCGGCATGGCAGAGGTGGACCAGGACCGCTCACAGAGCAGCACCCCTGTGACTGAACTCTCCAACCGCATCCTGGGCACCAGCTTCGAGGAGAAAGGGGCAGCGGCGGCAGCAGCGATTGGCGGCGGTGGTAAAGCAGGCGGAGCGATCGGCTTCGGACCGGAGGCCGTCCTGCTCAACGGCACGCGGCCCTCGCACAAGCGGCGCTCGTCCGAGAGCGAGACTCGCGACACAAAGAGACAGTACTCTCTGGAGCGGAGGGACGAGTCGccggagagagcgagagagagggagcgacagagggacagagaagGCCGGGGGGGCAGTAGCAGCTGTAGATCCAAAACCCCCTCCGCCTCGtcatccctctcctcctcctcctcaggcaAAGCGAACACAGTAGGCGGTGCGATCATGTTTGACTCCAGTGAACTCTCAGATGACGGGGAGGCGGTAAGCCCCGAAACCAACCTCCGCTGCTTGGTCAATTTCTTCAGAACCATGGGTTACCAGCAGGAAGTGGTGGAGCGTGTCGTCAAGGAGACGGGACAGACGGAAGACACCTTCCTCGTTCTGGAGAAAATCGTTGAGGAAACCAAGCGTTGTGAAGAGGGGTCAACAGGAGGGGGGAAAGAGAGACAATTGAACTCTGTGCGCTCCCCAGACGCTCCctcgtcctcgtcctcctcctcgtctGTGGTCTCTCGATTCCGAGAGAAGGAGCGCGAGCTGAGCCGAGCGCTGGTAGACCCGGCCAGGTCCAAAGAGAACATTAAGCCCAATCAGCATGGAGGCAGTAGCAACGGCCTGGGGCACCGGAGGCAGTGCAGCGGCAGCGAGACCAGCACGCAGCAGGCCATCACTATCAAGAGGAGCGCCAGTGCTCATGGGGGAGCAGGAAGCTACGAGGTTATTACCATTGACGATGACGATGACGTCATCCCCATGACGAAAACGGCGGACAGTAGGACGTCCCGGATGATGACGGTGCCACACCTGGACACCCAGTCAGGATCCAGAACGGACTACCTGGCGCGGGGAGGGGGACAGCGGGACTACTTGTCGCGGGGTGGGACTCAGACTCTGGGAGGATCAGTGAAGGTAGAGACTGTGACAGCGCTGCGCAGCACGCCTCAATGGCTGACCGCCACCACCACGTCCTTAGCTTCGACCCCCAGTtCAGCTCAGCCTATCGCCCGGCCCTCAGCCTCTCCCTATCAGACCATCGGCCACACGGGGTTTCATGGCGTCGGAGCCAGGGCTCCCCCTGCAAACGACCCCCCAGTGCCCCCGGTGACTGGCTTTGCTCGTTTCCATCAGTCGCTGAGGACTCCCTACACTCTGAAGCTGCCAAACGAGCCGGGACGTCAGGAGCTCAGACACATCATCATAGATGGCAGCAACGTGGCGATGGCTCACGGTCTTCATCGGTTCTTCTCCTGTCGAGGAATAGCGCTGGCTGTGGAGACCTTTTGGAGGCGGGGCCACAGGGAGATCACCGTATTTGTCCCCCAGTGGCGTCAGAAGAGAGACCGACTCACAACAGaacaacattttttaaaccagCTAGAAGACCTGAGACTGCTCTCCTTCACTCCCTCCAGAGAAGTGTGTGGCCAGAGGATATCCTCACACGacgacaggttcCTGCTCCACCTAGCAGAAAAAACAGACGGGATCATCGTAACCAATGACAACCTGAGGGACTTTGTCAATACCTCGGACACCTGGCGCAAGATCATTCAAGAGAGGTTGCTTCAGTTTACATTTGTGGAGGACCACTTCATGATCCCTGATGACCCTCTGGGGAAAAACGGACCTCATCTAGACCTCTTCCTGCGTAAAgacaacagGATGGCTCCAGCCACTCCCCTCCCTCTGAGACCCCCAGACTTCCGGCTGtcctcccagcagcagcagccggttTACGTCCAGGCCCTCCATTCGGCTCCCCGGACCCCCGCGCCCCCGCCCCCTACCTCCCTGATGCCCCACTCCGCTGCGCACTGGCCCCACTCGGGTCCACCCGAGTGGCACCCGCCCCGCCGTTCCCCATCCCCCTCGCCCTCGCCCCCTCCCCAGCGGTCGCTGGGGGAAACGTCGGAGCTGAAGAGGAAGCTGTACGACATCTTCCCCGACCAGAAGCAACGGATCGACCGCATCCTCAGCGACAACCCATACATGAGAGACCTGAACGCCCTGTCTGGCCTGCTGCTGGGATAGAGGACTGGCTCAGCCCGGAGactcagcagacacacacacacacacacacacacacacacacactacatatgCAAGAATATTCATGTCACG

Function

symbol description
n4bp1 Predicted to enable mRNA binding activity; ribonuclease activity; and ubiquitin binding activity. Predicted to be involved in negative regulation of macromolecule metabolic process; negative regulation of viral genome replication; and regulation of innate immune response. Predicted to act upstream of or within innate immune response. Predicted to be located in cytosol and nucleolus. Predicted to be active in PML body. Orthologous to human N4BP1 (NEDD4 binding protein 1).

NR:

description
NEDD4-binding protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039808979.1 True 3253 mRNA 0.59 12 36018268 36048411

Neighbor

gene id symbol gene type direction distance location
cbln1 cbln1,LOC104949597 coding upstream 324563 35659713 ~ 35693705 (+)
si:ch211-212o1.2 LOC103358434,LOC100695703,LOC102310624 coding upstream 431727 35512384 ~ 35586541 (+)
znf423 znf423 coding upstream 510984 35338892 ~ 35507284 (+)
si:ch211-216l23.2 LOC104955245,LOC103371405,LOC106964371 coding upstream 724132 35277266 ~ 35294136 (+)
setd6 LOC102793369 coding upstream 780231 35227019 ~ 35238037 (+)
siah1 siah1,LOC102794717 coding downstream 17217 36065628 ~ 36106450 (+)
st3gal2 st3gal2,LOC102780992 coding downstream 320350 36368761 ~ 36390263 (+)
exosc6 exosc6 coding downstream 381091 36429502 ~ 36431389 (+)
tgm2l LOC103363999,LOC104953692,LOC102308322 coding downstream 396682 36445093 ~ 36458111 (+)
trnal-cag_1 NA coding downstream 415075 36463486 ~ 36463568 (+)
G90151 NA non-coding upstream 104988 35913071 ~ 35913280 (+)
G90138 NA non-coding upstream 246867 35770996 ~ 35771401 (+)
G90131 NA non-coding upstream 320567 35697497 ~ 35697701 (+)
G90126 NA non-coding upstream 321504 35696005 ~ 35696764 (+)
G90125 NA non-coding upstream 322783 35694907 ~ 35695485 (+)
G90161 NA non-coding downstream 58632 36107043 ~ 36107491 (+)
G90162 NA non-coding downstream 59334 36107745 ~ 36108262 (+)
LOC120564233 NA non-coding downstream 137552 36185963 ~ 36188270 (+)
LOC120563515 NA non-coding downstream 191737 36240148 ~ 36240998 (+)
G90217 NA non-coding downstream 205990 36254401 ~ 36254823 (+)
G90142 NA other upstream 232852 35784694 ~ 35785416 (+)
LOC120563677 gnao1,LOC103367675,LOC108249535,LOC107660763,LOC100693875 other upstream 1027856 34847563 ~ 34990412 (+)
G89836 NA other upstream 1582951 34434089 ~ 34435317 (+)
G89813 NA other upstream 1597087 34381836 ~ 34421181 (+)
G89811 LOC100698998 other upstream 1655891 34360484 ~ 34362377 (+)
anapc13 anapc13 other downstream 467600 36516011 ~ 36517921 (+)
mt2 NA other downstream 482562 36530973 ~ 36531996 (+)
wfdc1 wfdc1,LOC102778323 other downstream 1973966 38022377 ~ 38034694 (+)
G90583 NA other downstream 2006098 38054509 ~ 38055564 (+)
G90686 NA other downstream 2609955 38658366 ~ 38680087 (+)

Expression


Co-expression Network