LOC120564315


Basic Information

Item Value
gene id LOC120564315
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 41459633 ~ 41460481 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039809165.1
TGATTATTTTTGGATGGAAAAGCTGACATAATTTCGGTTCCACAATGGACAGGGTTTATATAACTTTATCGGATGCAATGCTAAGAGTCGATCACTGCaaagggagaagaagaagaacatcatcatcatcatcatcatcaaaatcTTTTCACTGACAGCATGATGAAGACTCTCTGCTTCACTCtggggctgctgctgctcaccGCCTGCTGCTGCAACGCCATGCTTGAAGCTCTGAAGTTCAACACAGCACCTGGAAACTGCTGCTTCAACTTTCACACACGCGATATACCAGTAAAGCGTGTGTCCAACATAACCAAGACCCACAGCTCCTGTCAGAATCCGGCATTCATaaTCCAGACTATCAGAGGAAGACAGATCTGCTACAGCGGGACATCCCAGTGGGCTCGGGATGTCTACAATCAGCGCCACAACACTGAGGGCAGCGGTCAGCAGCACTAA

Function

GO:

id name namespace
GO:0050896 response to stimulus biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039809165.1 True 462 mRNA 0.47 3 41459633 41460481

Neighbor

gene id symbol gene type direction distance location
LOC120564366 fanca coding upstream 17951 41413915 ~ 41441682 (+)
slc10a3 LOC104954733,LOC100690979,LOC101468339,LOC102207614 coding upstream 50868 41406126 ~ 41408765 (+)
chmp1a chmp1a,LOC102798084 coding upstream 61824 41389815 ~ 41397809 (+)
vps4a vps4a,LOC106939979 coding upstream 117740 41329242 ~ 41341893 (+)
sntb2 sntb2 coding upstream 130656 41298625 ~ 41328977 (+)
spata2l NA coding downstream 50492 41510973 ~ 41516870 (+)
LOC120564437 NA coding downstream 60265 41520746 ~ 41531671 (+)
tat tat coding downstream 79696 41540177 ~ 41552179 (+)
zgc:56622 LOC102206997,LOC103365987,LOC101480675,LOC100696953,LOC102298364 coding downstream 92111 41552592 ~ 41564781 (+)
cotl1 cotl1 coding downstream 117697 41578178 ~ 41588578 (+)
G91465 NA non-coding upstream 120273 41338970 ~ 41339360 (+)
G91451 NA non-coding upstream 247834 41210504 ~ 41211799 (+)
G91383 NA non-coding upstream 598745 40843078 ~ 40860888 (+)
G91363 NA non-coding upstream 732215 40727146 ~ 40727418 (+)
G91358 NA non-coding upstream 746679 40712744 ~ 40712954 (+)
G91614 NA non-coding downstream 104602 41565083 ~ 41566409 (+)
G91625 NA non-coding downstream 128161 41588642 ~ 41676049 (+)
G91641 NA non-coding downstream 281704 41742185 ~ 41745030 (+)
G91648 NA non-coding downstream 291967 41752448 ~ 41752809 (+)
G91731 NA non-coding downstream 333070 41793551 ~ 41801340 (+)
exoc3l1 LOC106535935,LOC103369297,LOC103466291,LOC104962074,LOC101469518 other upstream 381411 41054390 ~ 41078222 (+)
LOC120563418 LOC101477895,LOC102304763,LOC106675229,LOC102199463 other upstream 503686 40953506 ~ 40955947 (+)
smpd3 smpd3,LOC102789354 other upstream 509468 40867721 ~ 40950165 (+)
gins3 gins3 other upstream 749200 40703181 ~ 40710433 (+)
LOC120564712 LOC108250350,LOC108250755 other upstream 956806 40472848 ~ 40502827 (+)
LOC120564397 NA other downstream 5183 41465664 ~ 41467325 (+)
vps9d1 vps9d1 other downstream 8762 41469243 ~ 41496536 (+)
plcg2 plcg2 other downstream 164632 41625113 ~ 41667528 (+)
G91634 NA other downstream 232043 41692524 ~ 41732835 (+)
zfpm1 zfpm1 other downstream 414737 41875218 ~ 42014502 (+)

Expression


Co-expression Network