ric8a (ric8a)


Basic Information

Item Value
gene id ric8a
gene name ric8a
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 39944716 ~ 39963408 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039809297.1
TAATCTGTCCTCGCCGGCTCGCAGGGATTCGAACATCATGCTGTCATCCGAGGGTGGTGACAAACTATAGCGTCAATATACAATCtgagcgacacacacacacacacacacacacacacacacagtctgtgtctctctggcGGTGCATTCAGGAGGAAGCTGCAATGGCGATGAAAATGGATTTAAAAGGCATCATAGAGCAAATGGAGACGGGAGAGCAAGATGCTGCtctgacggctctgcagagctaCAACACGGAgATGAACCACTGCTTTACGTTCAGCAAGGAAGACGAGCAGTACAGAGAGGAAGAGAAGTTACGGAAGCTGCTGGGGGAGCTGGTGCTCGGCTTCCTGAACAGGGAGTTGCAGCCGTCCTGTCAGCTGGCCTGTCTAGAAACGGTCCGAATCCTGACCAGAGACAAAGATTGTCTGGATCCCTTCCTCAGCCGCTCGGCCATGTCCACTCTCGCCCGCTACGCCGGCATCGCCGTGTTCAGTACTGCCACACCTGCACACAGCCAGCCGGGGGAGGGCCAAGTGGAGggtgagggaggagagggggatgaGGCAGCAGAAGCATCCAGCGAGGAGATGGAGGAAGCCTCCCCTTCTTCAGAAAACGCTGACCAGGAAGTGATTGCTGAGGCTCTCAAGTCCATCTGTAACATCCTGCTACACAACCAGACGGGACAGGTGATAGCAGCAGATCTACAGCTGATAAAGGGCGTGGCAGAGAGGCTGAAGCAGTGTCATGATCCCATCTGGAACCATGAGGTGCGATTCTTCGACCTGCGCCTCACCTTCCTGCTGACCGCCCTGAGAGTGGACGTCAGGGCACAGCTGGCTCAGGAGCTTCACGGCATCAGTCTGCTAGGCAACCAGTTGGATGCCACACTGGATCTGAGTTGGCCAGATACGTTGGAGACAGCCAGGGCGGGGTTAGAGGACGTCCCGCCAGAACAACTGCCCCCACTGAGCCGACAGCAGATAGAACTCGCCATGGAAATACTGAAAATACTGTTCAATATCACATTTGACACAACCAAGCGCAAGGTCGACGAGgaagaGGCAGCTGGGTACAGACATTTGGGAGCCATACTGAGACACTGTCTATTGAGTCATGCAGACGGAGAGGAGCGCACTGAGGAGTTCCACAGCCATGCTGTTCACTTGCTAGGCAACCTCCCTCTGCCCTGTCTGGATGTACTGTTGATGCCCAAAGTGCAACAAGGCTCCATAGAGTACATGGGGGTCAACATGGATGCTGTAAACATGCTGCTGGAATACATGGAGAAAAGACTGGACGGGGGACATAAGCTTAAGGAGACCCTTCTCCCATCACTCAACTTGCTGACTGAGAGTGCCCGAATCCACCGAGAGACCAGGAAGCTcctcaggtcaaaggtgctgCCCCCACTGCGTGACGTGAAGAACAAGCCCGAGGTGGGCAATTCCCTGAGGAACAAACTAGTCCGTATAATGACACACATTGACACCGACGTCAAGGACTGTGCTGCTGAATTCCTGTTTGTTCTCTGCAAAGAAAGTGTTTCAAGGTTCATTAAGTACACTGGCTACGGTAATGCTGCAGGTCTGCTGGCTGCCAGAGGACTGCTTCGGGGGGGTAGAGACTCGGGGATCTACTCTGAAGATGAAGATTCTGAGACAGAGGAGTACAGAGAGGCCAAAGCCCATATAAACCCAATAACAGGAGCTGTACAAGAGGAGCAGCCCGATCCCATGGAGGGAATGACAGAGGAGCAGAAAGAAATTGAAGCCATGAAGCTGGTCCAAATGTTTGACCGACTGTCAAgGACCAATTTGATCCAGCCCATGCAGCTCGGTATGGATGGGAAGATGAGAGAGATTGCGCCAGAGGATCTGCATAAACTGACCCACAATCCTTTGTTCCCGCCAGAGCCCCGCCAGGAGCCAGTTAATTCAGACAGTGAAGATGAGGCTTAGTAAACACAGAAGCATAAAGGCAGAAACGTGGAACATCTGTGTCATTATTTTAGATATTCACGTGACACTGGGTTTACCTTTTCTGATGGGCGGTGAGTGACAGAAAAAGTTGGATTTGTTTAgtcaaagtaaaaacaaagcaTGGAGTACATTGGAGGCAGCTTAAAGGgccactttgctttttttatatgTGCTATCGTGTCAACCACAAATCACCAGTGTTTTACTGCTCACCATTTTCCATTTGAAAATTGGTTTCCTTCCACGCAGACtttgtttcagttcatttcagtacactgtaaaaaacaacttGCTTCGGGGCGCTGTGGAGCACTTACAACACCAGAGAGGGTAAAGGTAACACTaaaacagatatatatatatatatatatatatatatatatatatatatatatatatatatatatatacatatatctatatctatatatatatatatatataacaatcaCGTGTTGTTATCTGTAGATGGCAAAATATGAACAAAGCATCGATATGGTCCTTTAAATCGTGCTCCTCTCTAGATGAAGACACACTTGTAGTATTCACTCACTGTTATGAAACAATGGGATCGTGATTGTTTTGTGGTCCGTATCCTATCATGTACTGGCTTCACCTCTGTCagttgattctgaaagcagttACAGGGGctcggagaaaaaagtgagcagGGTTCAGTTCTCAATGCTATAAGGTTTCTTAAGACACACGAGGATATACAGTAAACATTTTCTAACAATCGCTCATTCGTTTACTCCGATGACTTTAGAGTAGAAAGATAAGAAAGAGGCACCAGAGGGAAGGAGGAGTAGCATCACGACAGATAAATCTTCAGGATTTTTGATTATTGACTTTATGATACAAATTAAAACAGGCGTTGTTCAGAGTTTTCACAGAAggaatgtaacacacacacacacacacacacacacacacacacacacacacacac
>XM_039809298.1
TAATCTGTCCTCGCCGGCTCGCAGGGATTCGAACATCATGCTGTCATCCGAGGGTGGTGACAAACTATAGCGTCAATATACAATCtgagcgacacacacacacacacacacacacacacacacagtctgtgtctctctggcGGTGCATTCAGGAGGAAGCTGCAATGGCGATGAAAATGGATTTAAAAGGCATCATAGAGCAAATGGAGACGGGAGAGCAAGATGCTGCtctgacggctctgcagagctaCAACACGGAgATGAACCACTGCTTTACGTTCAGCAAGGAAGACGAGCAGTACAGAGAGCTGCTGGGGGAGCTGGTGCTCGGCTTCCTGAACAGGGAGTTGCAGCCGTCCTGTCAGCTGGCCTGTCTAGAAACGGTCCGAATCCTGACCAGAGACAAAGATTGTCTGGATCCCTTCCTCAGCCGCTCGGCCATGTCCACTCTCGCCCGCTACGCCGGCATCGCCGTGTTCAGTACTGCCACACCTGCACACAGCCAGCCGGGGGAGGGCCAAGTGGAGggtgagggaggagagggggatgaGGCAGCAGAAGCATCCAGCGAGGAGATGGAGGAAGCCTCCCCTTCTTCAGAAAACGCTGACCAGGAAGTGATTGCTGAGGCTCTCAAGTCCATCTGTAACATCCTGCTACACAACCAGACGGGACAGGTGATAGCAGCAGATCTACAGCTGATAAAGGGCGTGGCAGAGAGGCTGAAGCAGTGTCATGATCCCATCTGGAACCATGAGGTGCGATTCTTCGACCTGCGCCTCACCTTCCTGCTGACCGCCCTGAGAGTGGACGTCAGGGCACAGCTGGCTCAGGAGCTTCACGGCATCAGTCTGCTAGGCAACCAGTTGGATGCCACACTGGATCTGAGTTGGCCAGATACGTTGGAGACAGCCAGGGCGGGGTTAGAGGACGTCCCGCCAGAACAACTGCCCCCACTGAGCCGACAGCAGATAGAACTCGCCATGGAAATACTGAAAATACTGTTCAATATCACATTTGACACAACCAAGCGCAAGGTCGACGAGgaagaGGCAGCTGGGTACAGACATTTGGGAGCCATACTGAGACACTGTCTATTGAGTCATGCAGACGGAGAGGAGCGCACTGAGGAGTTCCACAGCCATGCTGTTCACTTGCTAGGCAACCTCCCTCTGCCCTGTCTGGATGTACTGTTGATGCCCAAAGTGCAACAAGGCTCCATAGAGTACATGGGGGTCAACATGGATGCTGTAAACATGCTGCTGGAATACATGGAGAAAAGACTGGACGGGGGACATAAGCTTAAGGAGACCCTTCTCCCATCACTCAACTTGCTGACTGAGAGTGCCCGAATCCACCGAGAGACCAGGAAGCTcctcaggtcaaaggtgctgCCCCCACTGCGTGACGTGAAGAACAAGCCCGAGGTGGGCAATTCCCTGAGGAACAAACTAGTCCGTATAATGACACACATTGACACCGACGTCAAGGACTGTGCTGCTGAATTCCTGTTTGTTCTCTGCAAAGAAAGTGTTTCAAGGTTCATTAAGTACACTGGCTACGGTAATGCTGCAGGTCTGCTGGCTGCCAGAGGACTGCTTCGGGGGGGTAGAGACTCGGGGATCTACTCTGAAGATGAAGATTCTGAGACAGAGGAGTACAGAGAGGCCAAAGCCCATATAAACCCAATAACAGGAGCTGTACAAGAGGAGCAGCCCGATCCCATGGAGGGAATGACAGAGGAGCAGAAAGAAATTGAAGCCATGAAGCTGGTCCAAATGTTTGACCGACTGTCAAgGACCAATTTGATCCAGCCCATGCAGCTCGGTATGGATGGGAAGATGAGAGAGATTGCGCCAGAGGATCTGCATAAACTGACCCACAATCCTTTGTTCCCGCCAGAGCCCCGCCAGGAGCCAGTTAATTCAGACAGTGAAGATGAGGCTTAGTAAACACAGAAGCATAAAGGCAGAAACGTGGAACATCTGTGTCATTATTTTAGATATTCACGTGACACTGGGTTTACCTTTTCTGATGGGCGGTGAGTGACAGAAAAAGTTGGATTTGTTTAgtcaaagtaaaaacaaagcaTGGAGTACATTGGAGGCAGCTTAAAGGgccactttgctttttttatatgTGCTATCGTGTCAACCACAAATCACCAGTGTTTTACTGCTCACCATTTTCCATTTGAAAATTGGTTTCCTTCCACGCAGACtttgtttcagttcatttcagtacactgtaaaaaacaacttGCTTCGGGGCGCTGTGGAGCACTTACAACACCAGAGAGGGTAAAGGTAACACTaaaacagatatatatatatatatatatatatatatatatatatatatatatatatatatatatatacatatatctatatctatatatatatatatatataacaatcaCGTGTTGTTATCTGTAGATGGCAAAATATGAACAAAGCATCGATATGGTCCTTTAAATCGTGCTCCTCTCTAGATGAAGACACACTTGTAGTATTCACTCACTGTTATGAAACAATGGGATCGTGATTGTTTTGTGGTCCGTATCCTATCATGTACTGGCTTCACCTCTGTCagttgattctgaaagcagttACAGGGGctcggagaaaaaagtgagcagGGTTCAGTTCTCAATGCTATAAGGTTTCTTAAGACACACGAGGATATACAGTAAACATTTTCTAACAATCGCTCATTCGTTTACTCCGATGACTTTAGAGTAGAAAGATAAGAAAGAGGCACCAGAGGGAAGGAGGAGTAGCATCACGACAGATAAATCTTCAGGATTTTTGATTATTGACTTTATGATACAAATTAAAACAGGCGTTGTTCAGAGTTTTCACAGAAggaatgtaacacacacacacacacacacacacacacacacacacacacacacac

Function

symbol description
ric8a Predicted to enable G-protein alpha-subunit binding activity and guanyl-nucleotide exchange factor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be active in cytoplasm and plasma membrane. Orthologous to human RIC8A (RIC8 guanine nucleotide exchange factor A).

NR:

description
synembryn-A isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039809297.1 True 2940 mRNA 0.48 15 39944716 39963408
XM_039809298.1 False 2922 mRNA 0.48 14 39944716 39963408

Neighbor

gene id symbol gene type direction distance location
trnap-ugg_2 NA coding upstream 191051 39753594 ~ 39753665 (+)
bcar1 LOC104967430 coding upstream 257667 39604241 ~ 39687049 (+)
cfdp1 cfdp1,LOC105419833 coding upstream 347648 39572414 ~ 39597068 (+)
LOC120564046 NA coding upstream 408776 39528252 ~ 39535940 (+)
LOC120564045 NA coding upstream 416674 39515135 ~ 39528042 (+)
LOC120564391 NA coding downstream 10210 39973618 ~ 39974980 (+)
dnajc24 dnajc24 coding downstream 307115 40270523 ~ 40277195 (+)
LOC120564733 NA coding downstream 412892 40376300 ~ 40400951 (+)
LOC120564785 NA coding downstream 438700 40402108 ~ 40414480 (+)
si:dkey-12e7.1 LOC104959053,LOC107389248,LOC106903666,LOC100708592,LOC101482187 coding downstream 585840 40549248 ~ 40557864 (+)
G91075 NA non-coding upstream 21552 39921120 ~ 39923164 (+)
G91074 ppp6r3 non-coding upstream 23636 39920505 ~ 39921080 (+)
G91071 NA non-coding upstream 40193 39904291 ~ 39904523 (+)
G91070 NA non-coding upstream 41252 39903124 ~ 39903464 (+)
G91051 NA non-coding upstream 43794 39900030 ~ 39900922 (+)
G91130 NA non-coding downstream 22889 39986297 ~ 39986496 (+)
G91139 NA non-coding downstream 88527 40051935 ~ 40116282 (+)
G91144 NA non-coding downstream 102130 40065538 ~ 40073141 (+)
G91166 NA non-coding downstream 209109 40172517 ~ 40172881 (+)
G91171 NA non-coding downstream 212589 40175997 ~ 40176219 (+)
LOC120563436 NA other upstream 70539 39871690 ~ 39874177 (+)
G90693 NA other upstream 1064814 38877050 ~ 38879902 (+)
G90686 NA other upstream 1264629 38658366 ~ 38680087 (+)
G90583 NA other upstream 1889152 38054509 ~ 38055564 (+)
wfdc1 wfdc1,LOC102778323 other upstream 1910022 38022377 ~ 38034694 (+)
LOC120564712 LOC108250350,LOC108250755 other downstream 509440 40472848 ~ 40502827 (+)
gins3 gins3 other downstream 739773 40703181 ~ 40710433 (+)
smpd3 smpd3,LOC102789354 other downstream 904313 40867721 ~ 40950165 (+)
LOC120563418 LOC101477895,LOC102304763,LOC106675229,LOC102199463 other downstream 990098 40953506 ~ 40955947 (+)
exoc3l1 LOC106535935,LOC103369297,LOC103466291,LOC104962074,LOC101469518 other downstream 1090982 41054390 ~ 41078222 (+)

Expression


Co-expression Network