LOC120564391


Basic Information

Item Value
gene id LOC120564391
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 39973618 ~ 39974980 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039809299.1
CGTTATCTGTTCattctctaaaaaaaaacaggaaggaGAGAGATGGGTATCCACTCCTCCATCCCTAAAGGTCCTCCACTGAGGATTGTGATGATTGGGAAAACTGGAGTTGGAAAAAGTGCCGTCGGTAACACCATTTTGGGTAGAAAGGATTTTCATTTGTGTGCGAGTGCACACTCTGTGACGCAGAGCTGCCAGAAAGAACGGGTCAACAACAGGAGCAGAAAGGTCGATGTGGTCGATACACCGGGGGTTCTGGATACGTCTAAAAGTGCAGAGAGCATAAAGAAAGAGATTGCAAAGTGCATCCAGGTGTCCTCTCCCGGCCCTCACGCCTTTCTGCTGGTCATCCAGATCGGCAGGTtcacaaaagaagaagaaaactgcGTGCAAGCCCTGGAGAAGATCTTCGGACCTGAGGCGTCTAAGTACATGATCATTCTGTTCACGCGTGGCGATGAGCTGCAGGGCACCATTCAGGATTACGTTCAATACGGTCACCCCAAACTTCGGGAGTTGATTAACAGGTGCGGTAACCGGTACCATGTCTTCAACAACAAGAAAAGGAGGAACAGAACCCAAGTAGCTCAGCTGATTAATATGATCGATATGATGGTGGTGGCAAATGGAGGACAGCATTTTAGTGAAGAAATGTATGAGGTAGCAGAGAAGACTCTGCAGCAGCAGAAAAAGTACAGAGAAACAACAGCGGAGGTTTACAACTTCCCCTTCATGGCTGAGCTACATCAGAGGGTCATTCGCTTCCAGGCCGTACTGGCTGATGGCGAACAAGACGGACACCAACAACCTGAAGCACTCCGGCACTGCCTTTAGTTTTTCACCAAATCACATTGTGTGCCTGAGGTCTATTAAACGTgttgaatgcatttcctgcttgtattttaaaacctgcattgtttacattccacgttaactagctagctgGCATTTCTGCTCTCTTTTGTAAATTACTGTCACCTATTGTCGATTAGCAGAATAAAATGATCAGCAAGAGTGTGCTCACCCACTGACATTATATTGTGGGTgcacaatacacaaaaaactTGTAAAAACATAGCACCAGTAGTCAAACACTCCACATGGTACATTATAATACATTTGTGGGAAATGGTGTCACTTTAAATTTAGGTATGGtgtgacatatatacattatttcgtgtttcttttttttctttttttctgtggtaAAAGGTCTCATCGTGGTAATaaagtgaacaataaaataTACTCAATGCTCCA

Function

GO:

id name namespace
GO:0005525 GTP binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039809299.1 True 1260 mRNA 0.44 2 39973618 39974980

Neighbor

gene id symbol gene type direction distance location
ric8a ric8a coding upstream 10210 39944716 ~ 39963408 (+)
trnap-ugg_2 NA coding upstream 219953 39753594 ~ 39753665 (+)
bcar1 LOC104967430 coding upstream 286569 39604241 ~ 39687049 (+)
cfdp1 cfdp1,LOC105419833 coding upstream 376550 39572414 ~ 39597068 (+)
LOC120564046 NA coding upstream 437678 39528252 ~ 39535940 (+)
dnajc24 dnajc24 coding downstream 295543 40270523 ~ 40277195 (+)
LOC120564733 NA coding downstream 401320 40376300 ~ 40400951 (+)
LOC120564785 NA coding downstream 427128 40402108 ~ 40414480 (+)
si:dkey-12e7.1 LOC104959053,LOC107389248,LOC106903666,LOC100708592,LOC101482187 coding downstream 574268 40549248 ~ 40557864 (+)
anpepa NA coding downstream 584311 40559291 ~ 40586148 (+)
G91049 NA non-coding upstream 2706 39910587 ~ 39970912 (+)
G91075 NA non-coding upstream 50454 39921120 ~ 39923164 (+)
G91074 ppp6r3 non-coding upstream 52538 39920505 ~ 39921080 (+)
G91071 NA non-coding upstream 69095 39904291 ~ 39904523 (+)
G91070 NA non-coding upstream 70154 39903124 ~ 39903464 (+)
G91130 NA non-coding downstream 11317 39986297 ~ 39986496 (+)
G91139 NA non-coding downstream 76955 40051935 ~ 40116282 (+)
G91144 NA non-coding downstream 90558 40065538 ~ 40073141 (+)
G91166 NA non-coding downstream 197537 40172517 ~ 40172881 (+)
G91171 NA non-coding downstream 201017 40175997 ~ 40176219 (+)
LOC120563436 NA other upstream 99441 39871690 ~ 39874177 (+)
G90693 NA other upstream 1093716 38877050 ~ 38879902 (+)
G90686 NA other upstream 1293531 38658366 ~ 38680087 (+)
G90583 NA other upstream 1918054 38054509 ~ 38055564 (+)
wfdc1 wfdc1,LOC102778323 other upstream 1938924 38022377 ~ 38034694 (+)
LOC120564712 LOC108250350,LOC108250755 other downstream 497868 40472848 ~ 40502827 (+)
gins3 gins3 other downstream 728201 40703181 ~ 40710433 (+)
smpd3 smpd3,LOC102789354 other downstream 892741 40867721 ~ 40950165 (+)
LOC120563418 LOC101477895,LOC102304763,LOC106675229,LOC102199463 other downstream 978526 40953506 ~ 40955947 (+)
exoc3l1 LOC106535935,LOC103369297,LOC103466291,LOC104962074,LOC101469518 other downstream 1079410 41054390 ~ 41078222 (+)

Expression


Co-expression Network