steep1 (clg7hxorf56,csgr13hxorf56,LOC104938431,LOC101478835,LOC103368976)


Basic Information

Item Value
gene id steep1
gene name clg7hxorf56,csgr13hxorf56,LOC104938431,LOC101478835,LOC103368976
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 36534215 ~ 36535887 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039809946.1
ccatAGGGGTGTATTCTGAGGattcaaattgtaattataaatCTAATTTTATAAAGGCGAACTTGCTGGTGAAAATCTGATAACTTTGTTGGCAGTACTAGATGGGTTTATTTTGACCTGGGCCTGCGCGTAACATTGTAATCACGCGGAACAAAAAGGAAGACGCTTTTGGTTTCGGGTAGGAAGCGTAAAAGTGACGGACACAGGAAGTGTTTCGTCGTCTTTCTGTGTTGGTTTCGGACGGACGACTTTTTTTAACCAAGGGTTTCGTCGTCATGGCGTTTAAATAGACGCCAGCGTTACTAGTATTATAATACCTTTAAGtggctaacgttaaacatgCCGAAGGTCGTGTCTAGAAGCGTTGTGTGCTCGGACACCAGAGACCGAGAGGAGTACGACGACGGAGAAAAGCCTCTTCACGTCTACTACTGCCTGTGCGGTCAGATGGTTCTGGTGTTGGACTGCCAGCTGGAGAAGCTACCCATGAGGCCCCGGGACCGGGCCAGGGTCATCGATGCGGCCAAACACGCCCACAAGTTCTGCAACGTGGAGCAGGACGAAAACGCGTACCTGAAGAGGGCCGAGGGCATCGAGAGGCAGTACCGCAAGAAATGCGGCAAGTGCGGCCTGCTGCTCTTCTACCAGCACCAGTCGAAGAACAGCCCGGCCACCTTCATCGTGGACGGAGCCGTGGTCAAGTTCGGCCAGGGCTTCGGCAACACCAGCGTCTACAGCCAGAAGCAGCCGGAGGCTCCGAAGAAGGTCCGCGTGATGATGACCAAGCGGACCAAAGACATGGGCAAGTTCAGCTCCGTCACAGTGTCCACCAtcgacgaggaggaggaggagatcgAGGCCAGGGAGGTGGCGGACTCGTACGCCCAGAACGCCAAAGTCATCGAGAAGCAGCTGGAGAGGAAGGGCATGAgcaagaggaggctgcaggagCTGGCTGAGCTGGAGGCCAAGAAGGCGAAGATGAAGGGCACGCTTATCGATAATCAGTTCAAGTAGAGGAGACTCAATGAGGGACACACTGTGATACAAAAGTTCCCTCTGGAGCAGTGGTGTACTCTAATGTatcctagtgggtatactgtactatatattggccagaatctgcctttgggggagggaGGTCTTCTATCATAGTGGGGGgatctgggtgtcctcccccagggaagttttgagaaTCAACAACttaatttcctgtattcggatacacttttatgcaccatttcaccctttatttagcctatgtgaagaacaaaaacacagatggcAGTTCAAAATATATCTAAAATATGATGGAAATTATGTTGTTGTGGGtcatggaaatcctggagctttcttagtgggtatactgcgtatacctgcgtatcacatagactacaccactgctctgGAGATCCTCTTCCACAGTAGACCCAATTACTATGTTTCCTGTACTGGCCAGTAGTTTGTCAGCCAGTACTGGACAGTACTAGGGGACAATATTTGGACATATCCGTAATACAGGACTGATGATTTGTCTAGATGTTGCATATTAAGATGGTGATCTGGTGGTGAGGttggaaaacttttttttttttacgtctgtttaaaatgttattttgtacaaaacttaaaaattAAAAGACCAAATGAACatgtttggtattttttaaGCA

Function

NR:

description
PREDICTED: UPF0428 protein CXorf56 homolog

GO: NA

KEGG:

id description
K24996 STEEP1; STING ER exit protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039809946.1 True 1673 mRNA 0.48 1 36534215 36535887

Neighbor

gene id symbol gene type direction distance location
LOC120564167 NA coding upstream 44572 36465695 ~ 36489643 (+)
trnal-cag_1 NA coding upstream 70647 36463486 ~ 36463568 (+)
tgm2l LOC103363999,LOC104953692,LOC102308322 coding upstream 76104 36445093 ~ 36458111 (+)
exosc6 exosc6 coding upstream 102826 36429502 ~ 36431389 (+)
st3gal2 st3gal2,LOC102780992 coding upstream 143952 36368761 ~ 36390263 (+)
nup93 nup93,LOC103368977 coding downstream 7881 36543768 ~ 36577859 (+)
zpd NA coding downstream 47007 36582894 ~ 36589156 (+)
mmp15a LOC103368972,LOC102304799,LOC104953712 coding downstream 61038 36596925 ~ 36621244 (+)
LOC120564181 LOC100709340,LOC102206288,LOC101464383,LOC102303471,LOC103368978 coding downstream 90011 36625898 ~ 36662806 (+)
lrrc29 lrrc29,LOC104953705,LOC102207977,LOC102302674 coding downstream 131223 36667110 ~ 36683486 (+)
G90241 aars,LOC102788534 non-coding upstream 134145 36397291 ~ 36400070 (+)
G90236 NA non-coding upstream 165785 36312714 ~ 36368430 (+)
G90238 NA non-coding upstream 175997 36352310 ~ 36358218 (+)
G90218 NA non-coding upstream 278649 36255175 ~ 36255566 (+)
G90217 NA non-coding upstream 279392 36254401 ~ 36254823 (+)
LOC120563368 NA non-coding downstream 58269 36594156 ~ 36595693 (+)
G90311 NA non-coding downstream 186038 36721925 ~ 36722827 (+)
G90523 NA non-coding downstream 1161877 37697764 ~ 37697977 (+)
G90575 NA non-coding downstream 1460673 37996560 ~ 37996773 (+)
LOC120564394 NA non-coding downstream 1517018 38052905 ~ 38054178 (+)
mt2 NA other upstream 2219 36530973 ~ 36531996 (+)
anapc13 anapc13 other upstream 16294 36516011 ~ 36517921 (+)
G90142 NA other upstream 748799 35784694 ~ 35785416 (+)
LOC120563677 gnao1,LOC103367675,LOC108249535,LOC107660763,LOC100693875 other upstream 1543803 34847563 ~ 34990412 (+)
G89836 NA other upstream 2098898 34434089 ~ 34435317 (+)
wfdc1 wfdc1,LOC102778323 other downstream 1486490 38022377 ~ 38034694 (+)
G90583 NA other downstream 1518622 38054509 ~ 38055564 (+)
G90686 NA other downstream 2122479 38658366 ~ 38680087 (+)
G90693 NA other downstream 2341163 38877050 ~ 38879902 (+)
LOC120563436 NA other downstream 3335803 39871690 ~ 39874177 (+)

Expression


Co-expression Network