spire2 (spire2)


Basic Information

Item Value
gene id spire2
gene name spire2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 41247591 ~ 41293346 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039810009.1
TACTACGGCTACCTTGACACTGTTGTGGTAACGAGGTGCAGCTGCAGTAGTTGAGGAGCAGTAGACGACAAGAAGACGACAGGAGAGACTGTGCCGATTAGTAGTTACTCAGCGGATAGCATCAATGGCCCCGGTGCCTAAGAAGTGAAGAATGGACTCCACGCTATCGCTGCCATGGCCAGATCCACCAACAGAAGCGCCGAGGACGGGGAGTCAAGGGTAACCGCCCCCGCGGATCGCGTAGAGTCGCCCCGGGAACTGTCTCTGGAAGAGGTGCTGAAGTCGTACGAGCAGCCCATCAACGAGGAGCAGGCATGGGCGGTGTGCTACCAGTGCTGCAGCGGGTTGAGGGTGCCCCGCCCGCCGGCCGGGAGAGTCATTCGGGTGAAAGACCCGTCCTCCATACTCCTGCGCAGGGACGGAACCGTGGCACTGCAGCAGGAGCCCCGACACAACGATGACACTGAtggacctcctcctcctccacctgctGCAGAGCGTCagCTGGTCCAGTCGCTGGGTGTGGCCATCTACAGAGCTCTGGACTGGGGGCTGGACGACAGCGAGGAGCGGGAGCTCGGCCCGCAGCTGGAGAGCCTGATTGAGCGCATGGCCGGGGGGGACCAGGGGGGGGAGGAAGTCTGCACCGGCAGGAACGGCGCCACAGACGAGGGCTACAGCGGccaagaagaggaggaggaggaagaggagaagcagGAGGGAGTGATCAGGCCGGTGTGTACGTTCCGCCAGGTGGTGGCGCTGTGTGCGTCTCGGCTGGCCAACCCAAGCTTGGCTCCAGAGCACTACCAGGCTGTCTGCAGGGCTCTGTTTGTAGAGACTCTGGAGCTGCAGACCTTCCTCAGCAAGATCAGAGATGCTAAGGAGATGCTGAAGAAGATCACAAAAGAGGAAGCACCGGAAAACAGGCCTACATCTGAGCTGGAcgcactgaaacacacagactGGGCCCGTCTGTGGGTGCAGCTGATGAAGGAGCTCCGGCAGGGCGTGAAGCTGAAGAAGGTGCGGGAGCAGCCGTTCAACCTGCTGCCCACCGAGTTCAGCCTCACACCCTTTGAGATGCTGATGCAGGACATACGAACTCGCAAGTTCCAGCTACGCAAAGTCATGGTGGACAGTGACATTCCCACGAATGTAAAGAGAAATGCCCATGAACTGATACTGGATTTCATCAGATCAAGACCTCCACTTAAACCAGTTTCAGAGCGCAGCCTCCCCCCTCCTCCGCCGCAGCAGCAGTGCCTCCATGACCGGGTCCTGGCCGAGATCAAGCAGGAGAGAAAGCTCCGGCCCGTGGTCCTGCCCAGTTCCAGACCATTTGGATCTCTGCCCTGCCTGGCTCAGACTTGTCCTTGTAAAGGTAAATCTACTTCATGCATCGACCTGTCCGTGTCCGAGCCCGGGCCTCGGCCGCCGTCCCGCCCTCGCATCCTGCTCAAGGCTCCGACTCTGGCCGAGATGGAGGAGATGAACATATCCGAGGAGGAGGAGTCCCCAGACAGCGGGGAGCTGAGGAGGGCGGAGAGCTCCCCCACCCCTCTGAAAAGAGATCGCTCCTTCTCGGAGCACGACCTGGCCTTGCTCCGTGCCGAGATGCTACCTTCGCTCTCTGAGTCAGCCCACCTGGGCGGGGGGGTCAGGCTGAGGGGGGAGAGGCCTCGGTCCAGGACGCTGAGCGGCGCCGGGCCGCCTCCTAACCACAGAGcctctCTCCCAGTTCACGGCTGGGTGCCGCCCTCCCCGGCCCGCCTGTCTCTGAGTTCAGTGGACGAGACCACGGAGGGATCAGAGACGGCGTCTGGCTCCAGAGCTGGAGACGAGCACCAGTGGATGGAGGAGTTCAGCCACCCTGTGGAGAGTCTCGCATTGACAGTGGATGAGGTCATCAACGTGCGCAGAGTGCTAGTCAAAGCAGAGATGGAGAAGTTTCTTCAGAGTAAAGAGCTCTACAGTAACCTGAAGAGAGGCAAGgtttgctgctgctgcaaagtaAAATTCCCTCTCTTCTCATGGCCATCTACCTGCTTACTGTGTAAAAGATCTGTCTGCAGCTCCTGCAGTGCAAAGATGAAGATTCCCTCGAAGAAGATGGCCCATATTCCTGTGTACACTGTAGGCTTCCACAGCGCCCCAAAGAGCCATGGACACAAAAGCCAAGTCTATAAGTCCCTGCGCAGCTTATCCCGCCGCTCCGTGGAGGAGGAGTTCCCCCACCTGTATGCCCACGGCTGCACGCTGCGTGACATCTGCGCCGAATGCACCAAATTCGTCGCCGACGTCATTTCTTCCAGCCGCCGGAGTCTGGACATCCTCAACAACACTCCCAAGAGGGAGGccaaagctgctgctgctgtccctcaGAGACCACTGCTGCAACGCCAGTCACACCTCGACACTTGCCCTGATTCACATTCTCCCCACCCTCACCCTCAGTGTCACCCTCCACCTCACCCACAGCCACAGTGTCACCCCCAGCTCCCTCCCCAGTCCcatcagcagcaacagcagcggCTTCATGCGTCTTTCCCGTCTCATTCGCCTCAGTTCCACAACAAGACTATCTACAATGCGAACCAATGAgtagagtgacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacactcataatgAGTTGTGCTCCTGCACTacactgtgtacacacacagagaaagtaGGGTTCTTTAAGGGTTCACGTGGTGTATGCACATCAGCAATAGCCATAAAATTGGTTCAAATAAATATTAATCCATAATCCAGGGAGGGTCCTTCGAAGTTCTTTAAATATTGTTGGTGCTGGTCTGGAGCTTTAATTGTTATGCTGATATATAAACCTAAAGATTTCCCCCCACCCGGAGCTGTACTGTATAGAACCCTTTTTAGTAAGAATCTAGCGACTCTAACCACCATCCCCTCACCATCCAATTCCTAACTACATTATCTTCCATATCTCACCATCTCACCCAGCAGATGCTCACATGCACAGAACACCACC
>XM_039810010.1
TTACTACGGCTACCTTGACACTGTTGTGGTAACGAGGTGCAGCTGCAGTAGTTGAGGAGCAGTAGACGACAAGAAGACGACAGGAGAGACTGTGCCGATTAGTAGTTACTCAGCGGATAGCATCAATGGCCCCGGTGCCTAAGAAGTGAAGAATGGACTCCACGCTATCGCTGCCATGGCCAGATCCACCAACAGAAGCGCCGAGGACGGGGAGTCAAGGGTAACCGCCCCCGCGGATCGCGTAGAGTCGCCCCGGGAACTGTCTCTGGAAGAGGTGCTGAAGTCGTACGAGCAGCCCATCAACGAGGAGCAGGCATGGGCGGTGTGCTACCAGTGCTGCAGCGGGTTGAGGGTGCCCCGCCCGCCGGCCGGGAGAGTCATTCGGGTGAAAGACCCGTCCTCCATACTCCTGCGCAGGGACGGAACCGTGGCACTGCAGCAGGAGCCCCGACACAACGATGACACTGAtggacctcctcctcctccacctgctGCAGAGCGTCagCTGGTCCAGTCGCTGGGTGTGGCCATCTACAGAGCTCTGGACTGGGGGCTGGACGACAGCGAGGAGCGGGAGCTCGGCCCGCAGCTGGAGAGCCTGATTGAGCGCATGGCCGGGGGGGACCAGGGGGGGGAGGAAGTCTGCACCGGCAGGAACGGCGCCACAGACGAGGGCTACAGCGGccaagaagaggaggaggaggaagaggagaagcagGAGGGAGTGATCAGGCCGGTGTGTACGTTCCGCCAGGTGGTGGCGCTGTGTGCGTCTCGGCTGGCCAACCCAAGCTTGGCTCCAGAGCACTACCAGGCTGTCTGCAGGGCTCTGTTTGTAGAGACTCTGGAGCTGCAGACCTTCCTCAGCAAGATCAGAGATGCTAAGGAGATGCTGAAGAAGATCACAAAAGAGGAAGCACCGGAAAACAGGCCTACATCTGAGCTGGAcgcactgaaacacacagactGGGCCCGTCTGTGGGTGCAGCTGATGAAGGAGCTCCGGCAGGGCGTGAAGCTGAAGAAGGTGCGGGAGCAGCCGTTCAACCTGCTGCCCACCGAGTTCAGCCTCACACCCTTTGAGATGCTGATGCAGGACATACGAACTCGCAAGTTCCAGCTACGCAAAGTCATGGTTTCAGAGCGCAGCCTCCCCCCTCCTCCGCCGCAGCAGCAGTGCCTCCATGACCGGGTCCTGGCCGAGATCAAGCAGGAGAGAAAGCTCCGGCCCGTGGTCCTGCCCAGTTCCAGACCATTTGGATCTCTGCCCTGCCTGGCTCAGACTTGTCCTTGTAAAGGTAAATCTACTTCATGCATCGACCTGTCCGTGTCCGAGCCCGGGCCTCGGCCGCCGTCCCGCCCTCGCATCCTGCTCAAGGCTCCGACTCTGGCCGAGATGGAGGAGATGAACATATCCGAGGAGGAGGAGTCCCCAGACAGCGGGGAGCTGAGGAGGGCGGAGAGCTCCCCCACCCCTCTGAAAAGAGATCGCTCCTTCTCGGAGCACGACCTGGCCTTGCTCCGTGCCGAGATGCTACCTTCGCTCTCTGAGTCAGCCCACCTGGGCGGGGGGGTCAGGCTGAGGGGGGAGAGGCCTCGGTCCAGGACGCTGAGCGGCGCCGGGCCGCCTCCTAACCACAGAGcctctCTCCCAGTTCACGGCTGGGTGCCGCCCTCCCCGGCCCGCCTGTCTCTGAGTTCAGTGGACGAGACCACGGAGGGATCAGAGACGGCGTCTGGCTCCAGAGCTGGAGACGAGCACCAGTGGATGGAGGAGTTCAGCCACCCTGTGGAGAGTCTCGCATTGACAGTGGATGAGGTCATCAACGTGCGCAGAGTGCTAGTCAAAGCAGAGATGGAGAAGTTTCTTCAGAGTAAAGAGCTCTACAGTAACCTGAAGAGAGGCAAGgtttgctgctgctgcaaagtaAAATTCCCTCTCTTCTCATGGCCATCTACCTGCTTACTGTGTAAAAGATCTGTCTGCAGCTCCTGCAGTGCAAAGATGAAGATTCCCTCGAAGAAGATGGCCCATATTCCTGTGTACACTGTAGGCTTCCACAGCGCCCCAAAGAGCCATGGACACAAAAGCCAAGTCTATAAGTCCCTGCGCAGCTTATCCCGCCGCTCCGTGGAGGAGGAGTTCCCCCACCTGTATGCCCACGGCTGCACGCTGCGTGACATCTGCGCCGAATGCACCAAATTCGTCGCCGACGTCATTTCTTCCAGCCGCCGGAGTCTGGACATCCTCAACAACACTCCCAAGAGGGAGGccaaagctgctgctgctgtccctcaGAGACCACTGCTGCAACGCCAGTCACACCTCGACACTTGCCCTGATTCACATTCTCCCCACCCTCACCCTCAGTGTCACCCTCCACCTCACCCACAGCCACAGTGTCACCCCCAGCTCCCTCCCCAGTCCcatcagcagcaacagcagcggCTTCATGCGTCTTTCCCGTCTCATTCGCCTCAGTTCCACAACAAGACTATCTACAATGCGAACCAATGAgtagagtgacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacactcataatgAGTTGTGCTCCTGCACTacactgtgtacacacacagagaaagtaGGGTTCTTTAAGGGTTCACGTGGTGTATGCACATCAGCAATAGCCATAAAATTGGTTCAAATAAATATTAATCCATAATCCAGGGAGGGTCCTTCGAAGTTCTTTAAATATTGTTGGTGCTGGTCTGGAGCTTTAATTGTTATGCTGATATATAAACCTAAAGATTTCCCCCCACCCGGAGCTGTACTGTATAGAACCCTTTTTAGTAAGAATCTAGCGACTCTAACCACCATCCCCTCACCATCCAATTCCTAACTACATTATCTTCCATATCTCACCATCTCACCCAGCAGATGCTCACATGCACAGAACACCACC
>XM_039810011.1
TTTACTACGGCTACCTTGACACTGTTGTGGTAACGAGGTGCAGCTGCAGTAGTTGAGGAGCAGTAGACGACAAGAAGACGACAGGAGAGACTGTGCCGATTAGTAGTTACTCAGCGGATAGCATCAATGGCCCCGGTGCCTAAGAAGTGAAGAATGGACTCCACGCTATCGCTGCCATGGCCAGATCCACCAACAGAAGCGCCGAGGACGGGGAGTCAAGGGTAACCGCCCCCGCGGATCGCGTAGAGTCGCCCCGGGAACTGTCTCTGGAAGAGGTGCTGAAGTCGTACGAGCAGCCCATCAACGAGGAGCAGGCATGGGCGGTGTGCTACCAGTGCTGCAGCGGGTTGAGGGTGCCCCGCCCGCCGGCCGGGAGAGTCATTCGGGTGAAAGACCCGTCCTCCATACTCCTGCGCAGGGACGGAACCGTGGCACTGCAGCAGGAGCCCCGACACAACGATGACACTGAtggacctcctcctcctccacctgctGCAGAGCGTCagCTGGTCCAGTCGCTGGGTGTGGCCATCTACAGAGCTCTGGACTGGGGGCTGGACGACAGCGAGGAGCGGGAGCTCGGCCCGCAGCTGGAGAGCCTGATTGAGCGCATGGCCGGGGGGGACCAGGGGGGGGAGGAAGTCTGCACCGGCAGGAACGGCGCCACAGACGAGGGCTACAGCGGccaagaagaggaggaggaggaagaggagaagcagGAGGGAGTGATCAGGCCGGTGTGTACGTTCCGCCAGGTGGTGGCGCTGTGTGCGTCTCGGCTGGCCAACCCAAGCTTGGCTCCAGAGCACTACCAGGCTGTCTGCAGGGCTCTGTTTGTAGAGACTCTGGAGCTGCAGACCTTCCTCAGCAAGATCAGAGATGCTAAGGAGATGCTGAAGAAGATCACAAAAGAGGAAGCACCGGAAAACAGGCCTACATCTGAGCTGGAcgcactgaaacacacagactGGGCCCGTCTGTGGGTGCAGCTGATGAAGGAGCTCCGGCAGGGCGTGAAGCTGAAGAAGGTGCGGGAGCAGCCGTTCAACCTGCTGCCCACCGAGTTCAGCCTCACACCCTTTGAGATGCTGATGCAGGACATACGAACTCGCAAGTTCCAGCTACGCAAAGTCATGGTGGACAGTGACATTCCCACGAATGTAAAGAGAAATGCCCATGAACTGATACTGGATTTCATCAGATCAAGACCTCCACTTAAACCAGTTTCAGAGCGCAGCCTCCCCCCTCCTCCGCCGCAGCAGCAGTGCCTCCATGACCGGGTCCTGGCCGAGATCAAGCAGGAGAGAAAGCTCCGGCCCGTGGTCCTGCCCAGTTCCAGACCATTTGGATCTCTGCCCTGCCTGGCTCAGACTTGTCCTTGTAAAGGTAAATCTACTTCATGCATCGACCTGTCCGTGTCCGAGCCCGGGCCTCGGCCGCCGTCCCGCCCTCGCATCCTGCTCAAGGCTCCGACTCTGGCCGAGATGGAGGAGATGAACATATCCGAGGAGGAGGAGTCCCCAGACAGCGGGGAGCTGAGGAGGGCGGAGAGCTCCCCCACCCCTCTGAAAAGAGATCGCTCCTTCTCGGAGCACGACCTGGCCTTGCTCCGTGCCGAGATGCTACCTTCGCTCTCTGAGTCAGCCCACCTGGGCGGGGGGGTCAGGCTGAGGGGGGAGAGGCCTCGGTCCAGGACGCTGAGCGGCGCCGGGCCGCCTCCTAACCACAGAGcctctCTCCCAGTTCACGGCTGGGTGCCGCCCTCCCCGGCCCGCCTGTCTCTGAGTTCAGTGGACGAGACCACGGAGGGATCAGAGACGGCGTCTGGCTCCAGAGCTGGAGACGAGCACCAGTGGATGGAGGAGTTCAGCCACCCTGTGGAGAGTCTCGCATTGACAGTGGATGAGGTCATCAACGTGCGCAGAGTGCTAGTCAAAGCAGAGATGGAGAAGTTTCTTCAGAGTAAAGAGCTCTACAGTAACCTGAAGAGAGGCAAGgtttgctgctgctgcaaagtaAAATTCCCTCTCTTCTCATGGCCATCTACCTGCTTACTGTGTAAAAGATCTGTCTGCAGCTCCTGCAGTGCAAAGTCCCAGCCCGTGTTGGATGTCTGGTTCTGTGCTCTGTAGGTTTGAAATTTAGGC

Function

symbol description
spire2 Predicted to enable actin binding activity. Predicted to be involved in several processes, including actin filament organization; cytoskeleton-dependent cytokinesis; and establishment of meiotic spindle localization. Predicted to act upstream of or within protein transport and vesicle-mediated transport. Predicted to be located in several cellular components, including cytoplasmic vesicle; cytoskeleton; and cytosol. Predicted to be active in cell cortex and cytoplasmic vesicle membrane. Orthologous to human SPIRE2 (spire type actin nucleation factor 2).

NR:

description
PREDICTED: protein spire homolog 2 isoform X1

GO: NA

KEGG:

id description
K02098 SPIR; spire

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039810009.1 True 3046 mRNA 0.57 15 41247593 41293346
XM_039810010.1 False 2960 mRNA 0.58 14 41247592 41293346
XM_039810011.1 False 2147 mRNA 0.60 14 41247591 41286042

Neighbor

gene id symbol gene type direction distance location
chst6 LOC103368421,LOC104956223 coding upstream 6159 41229696 ~ 41241432 (+)
tmem231 tmem231,LOC102799778 coding upstream 23038 41219604 ~ 41224553 (+)
adat1 NA coding upstream 38495 41196459 ~ 41209096 (+)
wwp2 wwp2 coding upstream 53143 41139639 ~ 41194448 (+)
polr2c polr2c coding upstream 124937 41117765 ~ 41122654 (+)
sntb2 sntb2 coding downstream 5279 41298625 ~ 41328977 (+)
vps4a vps4a,LOC106939979 coding downstream 35896 41329242 ~ 41341893 (+)
chmp1a chmp1a,LOC102798084 coding downstream 96469 41389815 ~ 41397809 (+)
slc10a3 LOC104954733,LOC100690979,LOC101468339,LOC102207614 coding downstream 112780 41406126 ~ 41408765 (+)
LOC120564366 fanca coding downstream 120569 41413915 ~ 41441682 (+)
G91451 NA non-coding upstream 35792 41210504 ~ 41211799 (+)
G91383 NA non-coding upstream 386703 40843078 ~ 40860888 (+)
G91363 NA non-coding upstream 520173 40727146 ~ 40727418 (+)
G91358 NA non-coding upstream 534637 40712744 ~ 40712954 (+)
G91292 LOC107389246,LOC100694841 non-coding upstream 714374 40526743 ~ 40533217 (+)
G91465 NA non-coding downstream 45624 41338970 ~ 41339360 (+)
G91614 NA non-coding downstream 271737 41565083 ~ 41566409 (+)
G91625 NA non-coding downstream 295296 41588642 ~ 41676049 (+)
G91641 NA non-coding downstream 448839 41742185 ~ 41745030 (+)
G91648 NA non-coding downstream 459102 41752448 ~ 41752809 (+)
exoc3l1 LOC106535935,LOC103369297,LOC103466291,LOC104962074,LOC101469518 other upstream 169369 41054390 ~ 41078222 (+)
LOC120563418 LOC101477895,LOC102304763,LOC106675229,LOC102199463 other upstream 291644 40953506 ~ 40955947 (+)
smpd3 smpd3,LOC102789354 other upstream 297426 40867721 ~ 40950165 (+)
gins3 gins3 other upstream 537158 40703181 ~ 40710433 (+)
LOC120564712 LOC108250350,LOC108250755 other upstream 744764 40472848 ~ 40502827 (+)
LOC120564397 NA other downstream 172318 41465664 ~ 41467325 (+)
vps9d1 vps9d1 other downstream 175897 41469243 ~ 41496536 (+)
plcg2 plcg2 other downstream 331767 41625113 ~ 41667528 (+)
G91634 NA other downstream 399178 41692524 ~ 41732835 (+)
zfpm1 zfpm1 other downstream 581872 41875218 ~ 42014502 (+)

Expression


Co-expression Network