LOC120564785


Basic Information

Item Value
gene id LOC120564785
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 40402108 ~ 40414480 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039810042.1
cCATGCTGCATGCTGGCAGAACACGGAAGCGTGGCTTTAGCTCTAGACGTAGTTAGCACGACGGTGTCTATTTGACAATTTAAACATGCCTAAAGCAGAAGTGTTGAGAGTGGCGGTGCAGGAGCGTCTAGTAgcggctgctgaagagatattCGGGCTGTTTGAGAGAACCatagcagagtacgaggaggaactGTTTCGTTCAAAGCAGAAGAACGAGCGGCAACGCAAACTCCTGGACGCTGTGTTAAAACCTGAGCTTCGGTTACACAGAGCAGTATTATCTGCAGATTCTCAGCAGGACCCAGATCCCCCGCACACTGGAGAGGAACAGGGGCGGCTCTGGAGTAGTCAGGAGGGCAAGCAGCTTCAAGGACCGGCCCCCAAGAAGAGGGAAGATGATGAAGATTCCTCACAGTTTCATCAAAGGCCAACTGGAGTGAACAAAAAGGCAAAGCCTCAAGCCACCCGCTCAACTCAACCAATGGAAATAGAGAGCGATGCAGAGGAGTGCGGAGGCGATCCAGATAGTTCTTTACAACCAGCTAATGATGAGACTCCAGACCATTCCGATCAAGGTGACACTGTAAAATTAAAGGAGACCCAGAAAGGTGTAGCAGACTTTTCTGAGCCTGAGGCTGCAAACAGTGATGATGACTGGATGGAATCAGGGAAACCTCGGTCAGATTTAAAAATGCGAAGAAACAAGGGCGTTCCTGAAGTTGGTAAAGGACATAACACTGGCAAGAAGTCTtttagctgctgtcagtgtggtaAAACATTTAAATCCAAGCACAGAAAAAGTCGTCCTGGACAGAAACCCTTTGTTTGCTCAGCTTGTGTTCAAAGATCCAAACAGCTTGCACGTGTAGTCGCAGACAAGACCGCTCGTTCAGGGGTGAAAAGCTTCAGATGTTCAGACTGTAAGAAAGAGTTTAGCAATAAAGGAGATGCTGTGAGACATATCCGAATTCACAACGGAGAGAAACCCTTCGGCTGCTCCATTTGCGGTAAAGGATTCACACAGAGCACAGGTTTGCGcgcacacatgagaatccacacaggagagaagccgtacgGCTGCTCTCTCTGTCCCAAACGGTTCAACCGGAGCGGAATTCTGTCTAGACACATGAGAGTTCATACGGGAGAGAAGCCTTACAGCTGCTCACTGTGTAACACGAGATTTACTCTGAGTCGGTCATTGTTAATACACATGAGGATCcatacaggagagaaacctttcagctgctcagtttgtgaTAAAAAATTTACACAGAAAGTACACCTGACACAACACATGACACTCCACACACAGGACACGCCCTTCAGTTGCCGTGCCTGTGGGAGAACATTCACTAGACAGTCGCGTGTGAAAAACCATAAGTGTGTTACtaagagcagcagcagttaaTAAAACCACGACTGAGAAATGGCCCACCTTGAATGTCTTACTATCTGCCACAAATTGGATTAAGtggtaaataaatgtaaattacAGCttattattttactgtaatgtgaTTAATCATATTAAATAATCGTGATGTCAACATTGACGAAAATAATTGGTATTatccccaccccctcccccattATAACTCTGCGCCACCAACTCGTCGACACAAATCATGAGGTTAGTTGAGGACAGCCCTACCAAATGTAACCTTACCCTTCAGTAaaatatatatcacacacaaacaggccaTGTATTTGATGAATGAAGCATTGTTTAGACCAAAATCTAGTAACTAAATTGAAAATAAGACTTAAGAGTCAGGATCTGTCCAGTTCAGGAAATCGTTTGGTGTTTTAGTGTGGActgagaattaaaaaaacaatgtaatgcaGCCTAGAagaacttttaaaaaaagaaaaagaaaaaagaaatcaacaacAATGTAATCAAGCTAATTCAGTTAGTTATATATGAAGAACAGAGGGCTATttacaaaaccaagataagggattaagctgggatttcagttatcctggaggacttgactcggtttcacaaaagcagaggcacctaagttaccatggagatttattctgtgcagctagcctgctcctgaccaggctaacagccaggctaacagctagcctgctcctgaccaggctaacagccaggatgtattaatcctggagccttttctgttcactcaaaAGTGGTTTCACCTTATTGTTATCAGCCCGTATTAAAATAACACATGTACATGTTGCTGTTCAGTTAAATACTGTTATTTGAATTtgtgaccattcttttttttataattattcatgtgtcattgttactgttatattgctgtatgaagactgctgttcatattgtttttagaagtttgatgaatatattacggCAGTTGAGATAATAAAGGCTGATAaagttgcaaatgtgttttttaaatgaagtctgttactaagggcaatatataaagtgctgtgcatgtgtttctatagtggaccaatgcaccttaattattttagttgatacattttttttttgttgtattctTAAACTTTAAAGTATTCAATAaattggcattcttagcaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039810042.1 True 2555 mRNA 0.42 2 40402108 40414480

Neighbor

gene id symbol gene type direction distance location
LOC120564733 NA coding upstream 1157 40376300 ~ 40400951 (+)
dnajc24 dnajc24 coding upstream 124913 40270523 ~ 40277195 (+)
LOC120564391 NA coding upstream 427128 39973618 ~ 39974980 (+)
ric8a ric8a coding upstream 438700 39944716 ~ 39963408 (+)
trnap-ugg_2 NA coding upstream 648443 39753594 ~ 39753665 (+)
si:dkey-12e7.1 LOC104959053,LOC107389248,LOC106903666,LOC100708592,LOC101482187 coding downstream 134768 40549248 ~ 40557864 (+)
anpepa NA coding downstream 144811 40559291 ~ 40586148 (+)
ldhd ldhd coding downstream 199036 40613516 ~ 40633735 (+)
znrf1 znrf1 coding downstream 221645 40636125 ~ 40700282 (+)
ndrg4 ndrg4,LOC102790713 coding downstream 316279 40730759 ~ 40802151 (+)
G91230 NA non-coding upstream 97788 40303864 ~ 40304320 (+)
G91229 NA non-coding upstream 98321 40303571 ~ 40303787 (+)
G91218 NA non-coding upstream 122243 40279222 ~ 40279865 (+)
G91188 NA non-coding upstream 205071 40195124 ~ 40197037 (+)
G91186 NA non-coding upstream 208818 40192792 ~ 40193290 (+)
G91280 NA non-coding downstream 88503 40502983 ~ 40503194 (+)
G91284 NA non-coding downstream 92577 40507057 ~ 40507294 (+)
G91285 NA non-coding downstream 93658 40508138 ~ 40508708 (+)
G91286 NA non-coding downstream 94252 40508732 ~ 40509348 (+)
G91288 NA non-coding downstream 103885 40518365 ~ 40519787 (+)
LOC120563436 NA other upstream 527931 39871690 ~ 39874177 (+)
G90693 NA other upstream 1522206 38877050 ~ 38879902 (+)
G90686 NA other upstream 1722021 38658366 ~ 38680087 (+)
G90583 NA other upstream 2346544 38054509 ~ 38055564 (+)
wfdc1 wfdc1,LOC102778323 other upstream 2367414 38022377 ~ 38034694 (+)
LOC120564712 LOC108250350,LOC108250755 other downstream 58368 40472848 ~ 40502827 (+)
gins3 gins3 other downstream 288701 40703181 ~ 40710433 (+)
smpd3 smpd3,LOC102789354 other downstream 453241 40867721 ~ 40950165 (+)
LOC120563418 LOC101477895,LOC102304763,LOC106675229,LOC102199463 other downstream 539026 40953506 ~ 40955947 (+)
exoc3l1 LOC106535935,LOC103369297,LOC103466291,LOC104962074,LOC101469518 other downstream 639910 41054390 ~ 41078222 (+)

Expression


Co-expression Network