wfdc1 (wfdc1,LOC102778323)


Basic Information

Item Value
gene id wfdc1
gene name wfdc1,LOC102778323
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 38022377 ~ 38034694 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039810056.1
GACATGTGCGCAAGCTGTGCCAGCAGACAGTTCCAGCTCTCAACAACTGATGCACAGACAGCTGCTGTTTCTCCCTTCCCCTGCTCCCCTAATTATTCTCCTTCTTTCGTTTCTTCACTACACTGCCTTCATTCATCCCCTCTGTACTTTCCCCTTCCTTCCCTCTACTTTGTCATTCTGTCCTGCACTTTTCCTCAGGCAGATATAAAGGCAGGTCTCGTTGGAGGGAGAGGGCTTGTGTAATCTCTGGCTGCACATGAGCACCAATGAGTTATTGCTTCAGCTGGAAAGGCACCACGGACGCGTAAAGGACAAACTTTGGAAtaaggagaggaaggaaggaatacCTCTGAGACAGGAAGggaggagaagggagggagaCGCAGAAAGAGTTCGGAGCTGGGGTGCAGGACGCAGACCATGCCGGGCTCTGTGGTGCTGCTACTGCTGTCCCTGTTGGTCCTGGCCACAGGAAGTGATTCCAGGAGAATCAGGAAAAGAGGACTCAACCATAAGGACTACGAGTACCCCAACCACCCCCAGTCCACACAGCACCAGAAGAATGACCGTTGTCCACCGCCACCCCAGATGTTGCCAGAGCGAGCCTGTGAGGTGCCCGGCTGCCGCTCCGACTCAGAGTGTGAGCGCCATAAACGCTGCTGCTACAATGGCTGCATCTACGCCTGCCTGGAGTCTGTCCAGCCGCCACCAGTGTTGGACTGGCTGGTGCAGCCCAAGCCTCGGTGGTTGGGCGGCAACGGCTGGCTGTTAGACGGCCCTGAGGAGGTTCTGCAGGCTGAGGCCTGCAGCACAACTGAGGATGGAGACGAGCCTCTTCATTGTCCTACGGGCTACGAGTGCCACATCATCAATCCAGGAAACCCTGCTGCTGGCATTCCTAACCGGGGACAATGCATCAAGCAACGTGGCAACTCCGatGGACGTGGTCTGAGGCACAAATACTTCAAGGACTACAAGGACTACTTAGGTACCAGTACAAACAATGCAGTGGGCTACGAAAAACATCATCACAAGCACCTGGGATGAAATCAACCAGACCTCCACCTCAGCTACGACCATGACACAACTCGAGACGTCAGCCCAGTGCTGTTGGATCTGCTCTCATCACACCTGAACCAGGATCAGATCTGCCCTTTTTTTACCAAAACTACAGCTGCTACCTCCTCTTTTCAAAGCCCCGTATTGCAGCCTGTCCTCAGTCACAAAGTCCTTTTCGGAGACAAGTCTGACGTACATACTACATACACAGCCAAAGAAATAAgtgcttttttttgtctctctgtgtgatgTCCATAAGAAAAGGTGGAGCAGAGGGTGGTGATGGGGAAGCAGAGGAGAGCACAGCAGGGCGTGCACCAAAGCTGTTCATCAAATGTCCCAAAAAGGAAATAAGAAACCCCTGccaatttttttctcttttctttacaacccctctccctccctgcaACTCATTATTATTCTCACCAACACATCTTTTAACCTTAAGGCTGGTCAGCGGAGAAAATCCAGACTGTGTGTAACTTATTCTGTCTCTCTTGTTGTCAGAAAGGACGGTGCTCACATTTCCTGATCTGAAATCTGGAAAGTTTCATAgacaaatagaaagaaaaaaaaaacagctggagTGGTCTCTGAATTAAATCCACATGATTAAAAGAAGAAATGCCAtaatgagtgagtgtgtggatTTGGAACAGCTGTAGATTAGTTCCAGCCAACAGATGCTGACCATGACTTCATTGCTGtgaaaatcaaaatcaaaataaggaaaaaatatTTCATTTGAGAGAGATGAAGATTTAAAGAGATACTCCAACAATTTTCATACTGAAAGGTTGTCCCTTCAATATTAAACTCTGTATATATTATATCTGTGATTCATTTCCAAGTCAGACAACAAATATCTACAAGAGCAGTATGGTTGTGCACACATCTCCTAATTTTCAATAATCATACTGCGTTATTTCAAAAATACTGGTCCTTCTGTTAAACTTCCCACTATGCAGTGCAGCCATGATAATAAAAAGGGCTTTTTCACCGAGCAGATATGTGTTATTCTAGAGCATAACTTGCTGCAATGAGCTGTTTAAACTTAGGTTGTGTCTCTTATCAATTCAAATGGTGCTCAGCTTCATTGCTGCCTATAATAACAGGAGAATAAGCTGTTCACATAATAAGCTGAAGGTGTCAAACAGTAAGCTGTAACCATTCTCTATATGTGCAGAGCTAAAGTGATTTCTGAATATTGCTATCTGACTGGTGCTGTAATGTTGCCTTGTTAATTCTGAATAAACCACATTGTTGAAGTC
>XR_005640145.1
GACATGTGCGCAAGCTGTGCCAGCAGACAGTTCCAGCTCTCAACAACTGATGCACAGACAGCTGCTGTTTCTCCCTTCCCCTGCTCCCCTAATTATTCTCCTTCTTTCGTTTCTTCACTACACTGCCTTCATTCATCCCCTCTGTACTTTCCCCTTCCTTCCCTCTACTTTGTCATTCTGTCCTGCACTTTTCCTCAGGCAGATATAAAGGCAGGTCTCGTTGGAGGGAGAGGGCTTGTGTAATCTCTGGCTGCACATGAGCACCAATGAGTTATTGCTTCAGCTGGAAAGGCACCACGGACGCGTAAAGGACAAACTTTGGAAtaaggagaggaaggaaggaatacCTCTGAGACAGGAAGggaggagaagggagggagaCGCAGAAAGAGTTCGGAGCTGGGGTGCAGGACGCAGACCATGCCGGGCTCTGTGGTGCTGCTACTGCTGTCCCTGTTGGTCCTGGCCACAGGAAGTGATTCCAGGAGAATCAGGAAAAGAGGACTCAACCATAAGGACTACGAGTACCCCAACCACCCCCAGTCCACACAGCACCAGAAGAATGACCGTTGTCCACCGCCACCCCAGATGTTGCCAGAGCGAGCCTGTGAGGTGCCCGGCTGCCGCTCCGACTCAGAGTGTGAGCGCCATAAACGCTGCTGCTACAATGGCTGCATCTACGCCTGCCTGGAGTCTGTCCAGCCGCCACCAGTGTTGGACTGGCTGGTGCAGCCCAAGCCTCGGTGGTTGGGCGGCAACGGCTGGCTGTTAGACGGCCCTGAGGAGGTTCTGCAGGCTGAGGCCTGCAGCACAACTGAGGATGGAGACGAGCCTCTTCATTGTCCTACGGGCTACGAGTGCCACATCATCAATCCAGGAAACCCTGCTGCTGGCATTCCTAACCGGGGACAATGCATCAAGCAACGTGGCAACTCCGatGGACGTGGTCTGAGGCACAAATACTTCAAGGACTACAAGGACTACTTAGGTAAGTGAGGTACCAGTACAAACAATGCAGTGGGCTACGAAAAACATCATCACAAGCACCTGGGATGAAATCAACCAGACCTCCACCTCAGCTACGACCATGACACAACTCGAGACGTCAGCCCAGTGCTGTTGGATCTGCTCTCATCACACCTGAACCAGGATCAGATCTGCCCTTTTTTTACCAAAACTACAGCTGCTACCTCCTCTTTTCAAAGCCCCGTATTGCAGCCTGTCCTCAGTCACAAAGTCCTTTTCGGAGACAAGTCTGACGTACATACTACATACACAGCCAAAGAAATAAgtgcttttttttgtctctctgtgtgatgTCCATAAGAAAAGGTGGAGCAGAGGGTGGTGATGGGGAAGCAGAGGAGAGCACAGCAGGGCGTGCACCAAAGCTGTTCATCAAATGTCCCAAAAAGGAAATAAGAAACCCCTGccaatttttttctcttttctttacaacccctctccctccctgcaACTCATTATTATTCTCACCAACACATCTTTTAACCTTAAGGCTGGTCAGCGGAGAAAATCCAGACTGTGTGTAACTTATTCTGTCTCTCTTGTTGTCAGAAAGGACGGTGCTCACATTTCCTGATCTGAAATCTGGAAAGTTTCATAgacaaatagaaagaaaaaaaaaacagctggagTGGTCTCTGAATTAAATCCACATGATTAAAAGAAGAAATGCCAtaatgagtgagtgtgtggatTTGGAACAGCTGTAGATTAGTTCCAGCCAACAGATGCTGACCATGACTTCATTGCTGtgaaaatcaaaatcaaaataaggaaaaaatatTTCATTTGAGAGAGATGAAGATTTAAAGAGATACTCCAACAATTTTCATACTGAAAGGTTGTCCCTTCAATATTAAACTCTGTATATATTATATCTGTGATTCATTTCCAAGTCAGACAACAAATATCTACAAGAGCAGTATGGTTGTGCACACATCTCCTAATTTTCAATAATCATACTGCGTTATTTCAAAAATACTGGTCCTTCTGTTAAACTTCCCACTATGCAGTGCAGCCATGATAATAAAAAGGGCTTTTTCACCGAGCAGATATGTGTTATTCTAGAGCATAACTTGCTGCAATGAGCTGTTTAAACTTAGGTTGTGTCTCTTATCAATTCAAATGGTGCTCAGCTTCATTGCTGCCTATAATAACAGGAGAATAAGCTGTTCACATAATAAGCTGAAGGTGTCAAACAGTAAGCTGTAACCATTCTCTATATGTGCAGAGCTAAAGTGATTTCTGAATATTGCTATCTGACTGGTGCTGTAATGTTGCCTTGTTAATTCTGAATAAACCACATTGTTGAAGTC

Function

symbol description
wfdc1 Predicted to enable peptidase inhibitor activity. Predicted to be involved in regulation of cell growth. Predicted to be located in extracellular region and membrane. Predicted to be integral component of membrane. Predicted to be active in extracellular space. Orthologous to human WFDC1 (WAP four-disulfide core domain 1).

NR:

description
PREDICTED: WAP four-disulfide core domain protein 1-like

GO:

id name namespace
GO:0010466 negative regulation of peptidase activity biological_process
GO:0005576 extracellular region cellular_component
GO:0030414 peptidase inhibitor activity molecular_function

KEGG:

id description
K23635 WFDC1; WAP four-disulfide core domain protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039810056.1 False 2330 mRNA 0.46 7 38022377 38034694
XR_005640145.1 True 2339 transcript 0.46 7 38022377 38034694

Neighbor

gene id symbol gene type direction distance location
si:dkey-246g23.4 NA coding upstream 14472 37997385 ~ 38007905 (+)
kcng4a kcng4,LOC102784647 coding upstream 43060 37947589 ~ 37979317 (+)
si:dkey-246g23.2 LOC100711201,LOC101469244,LOC102785219,LOC103353460,LOC102212915,LOC106536929 coding upstream 115220 37815654 ~ 37907157 (+)
zgc:173742 LOC103353462,LOC108237534,LOC106536918,LOC100710935 coding upstream 212279 37769084 ~ 37810098 (+)
cdh13 cdh13 coding upstream 352897 37209155 ~ 37669480 (+)
dyrk4 NA coding downstream 49696 38084390 ~ 38099254 (+)
ndufa9a ndufa9 coding downstream 65844 38100538 ~ 38108087 (+)
LOC120563882 NA coding downstream 176264 38210958 ~ 38245616 (+)
LOC120563875 LOC102784361,LOC100689846 coding downstream 238141 38272835 ~ 38287885 (+)
LOC120563880 NA coding downstream 325761 38360455 ~ 38361847 (+)
G90575 NA non-coding upstream 25604 37996560 ~ 37996773 (+)
G90523 NA non-coding upstream 324400 37697764 ~ 37697977 (+)
G90311 NA non-coding upstream 1299550 36721925 ~ 36722827 (+)
LOC120563368 NA non-coding upstream 1426684 36594156 ~ 36595693 (+)
G90241 aars,LOC102788534 non-coding upstream 1622307 36397291 ~ 36400070 (+)
LOC120564394 NA non-coding downstream 18211 38052905 ~ 38054178 (+)
LOC120563874 NA non-coding downstream 97193 38131887 ~ 38133182 (+)
G90624 NA non-coding downstream 234732 38269426 ~ 38272172 (+)
LOC120563884 NA non-coding downstream 267602 38302296 ~ 38303645 (+)
G90635 NA non-coding downstream 418108 38452802 ~ 38454316 (+)
mt2 NA other upstream 1490381 36530973 ~ 36531996 (+)
anapc13 anapc13 other upstream 1504456 36516011 ~ 36517921 (+)
G90142 NA other upstream 2236961 35784694 ~ 35785416 (+)
LOC120563677 gnao1,LOC103367675,LOC108249535,LOC107660763,LOC100693875 other upstream 3031965 34847563 ~ 34990412 (+)
G89836 NA other upstream 3587060 34434089 ~ 34435317 (+)
G90583 NA other downstream 19815 38054509 ~ 38055564 (+)
G90686 NA other downstream 623672 38658366 ~ 38680087 (+)
G90693 NA other downstream 842356 38877050 ~ 38879902 (+)
LOC120563436 NA other downstream 1836996 39871690 ~ 39874177 (+)
LOC120564712 LOC108250350,LOC108250755 other downstream 2438154 40472848 ~ 40502827 (+)

Expression


Co-expression Network