trnal-cag_1


Basic Information

Item Value
gene id trnal-cag_1
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 36463486 ~ 36463568 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_383
GTCAGGATGGCCGAGCGGTCTAAGGCGCTGCGTTCAGGTCGCAGTCTCCTCTGGAGgcgtgggttcgaatcccacttctgaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_383 True 83 tRNA 0.61 1 36463486 36463568

Neighbor

gene id symbol gene type direction distance location
tgm2l LOC103363999,LOC104953692,LOC102308322 coding upstream 5375 36445093 ~ 36458111 (+)
exosc6 exosc6 coding upstream 32097 36429502 ~ 36431389 (+)
st3gal2 st3gal2,LOC102780992 coding upstream 73223 36368761 ~ 36390263 (+)
siah1 siah1,LOC102794717 coding upstream 357036 36065628 ~ 36106450 (+)
n4bp1 n4bp1,LOC101465464 coding upstream 415075 36018268 ~ 36048411 (+)
LOC120564167 NA coding downstream 2127 36465695 ~ 36489643 (+)
steep1 clg7hxorf56,csgr13hxorf56,LOC104938431,LOC101478835,LOC103368976 coding downstream 70647 36534215 ~ 36535887 (+)
nup93 nup93,LOC103368977 coding downstream 80200 36543768 ~ 36577859 (+)
zpd NA coding downstream 119326 36582894 ~ 36589156 (+)
mmp15a LOC103368972,LOC102304799,LOC104953712 coding downstream 133357 36596925 ~ 36621244 (+)
G90241 aars,LOC102788534 non-coding upstream 63416 36397291 ~ 36400070 (+)
G90236 NA non-coding upstream 95056 36312714 ~ 36368430 (+)
G90238 NA non-coding upstream 105268 36352310 ~ 36358218 (+)
G90218 NA non-coding upstream 207920 36255175 ~ 36255566 (+)
G90217 NA non-coding upstream 208663 36254401 ~ 36254823 (+)
LOC120563368 NA non-coding downstream 130588 36594156 ~ 36595693 (+)
G90311 NA non-coding downstream 258357 36721925 ~ 36722827 (+)
G90523 NA non-coding downstream 1234196 37697764 ~ 37697977 (+)
G90575 NA non-coding downstream 1532992 37996560 ~ 37996773 (+)
LOC120564394 NA non-coding downstream 1589337 38052905 ~ 38054178 (+)
G90142 NA other upstream 678070 35784694 ~ 35785416 (+)
LOC120563677 gnao1,LOC103367675,LOC108249535,LOC107660763,LOC100693875 other upstream 1473074 34847563 ~ 34990412 (+)
G89836 NA other upstream 2028169 34434089 ~ 34435317 (+)
G89813 NA other upstream 2042305 34381836 ~ 34421181 (+)
G89811 LOC100698998 other upstream 2101109 34360484 ~ 34362377 (+)
anapc13 anapc13 other downstream 52443 36516011 ~ 36517921 (+)
mt2 NA other downstream 67405 36530973 ~ 36531996 (+)
wfdc1 wfdc1,LOC102778323 other downstream 1558809 38022377 ~ 38034694 (+)
G90583 NA other downstream 1590941 38054509 ~ 38055564 (+)
G90686 NA other downstream 2194798 38658366 ~ 38680087 (+)

Expression


Co-expression Network