trnap-ugg_2


Basic Information

Item Value
gene id trnap-ugg_2
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 39753594 ~ 39753665 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_385
ggctcgttggtctaggggtatgattctcgcttTGGGTGCGAGAGgtcccgggttcaaatcccggACGAGCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_385 True 72 tRNA 0.61 1 39753594 39753665

Neighbor

gene id symbol gene type direction distance location
bcar1 LOC104967430 coding upstream 66545 39604241 ~ 39687049 (+)
cfdp1 cfdp1,LOC105419833 coding upstream 156526 39572414 ~ 39597068 (+)
LOC120564046 NA coding upstream 217654 39528252 ~ 39535940 (+)
LOC120564045 NA coding upstream 225552 39515135 ~ 39528042 (+)
LOC120564047 NA coding upstream 247011 39498240 ~ 39506583 (+)
ric8a ric8a coding downstream 191051 39944716 ~ 39963408 (+)
LOC120564391 NA coding downstream 219953 39973618 ~ 39974980 (+)
dnajc24 dnajc24 coding downstream 516858 40270523 ~ 40277195 (+)
LOC120564733 NA coding downstream 622635 40376300 ~ 40400951 (+)
LOC120564785 NA coding downstream 648443 40402108 ~ 40414480 (+)
G91028 NA non-coding upstream 49861 39703322 ~ 39703733 (+)
G91002 NA non-coding upstream 59664 39690479 ~ 39693930 (+)
G90957 NA non-coding upstream 241676 39507028 ~ 39511918 (+)
G90960 NA non-coding upstream 260438 39445873 ~ 39493156 (+)
G90948 NA non-coding upstream 327408 39425296 ~ 39426186 (+)
G91034 NA non-coding downstream 953 39754618 ~ 39757562 (+)
G91059 NA non-coding downstream 89740 39843405 ~ 39863155 (+)
G91050 NA non-coding downstream 120566 39874231 ~ 39875734 (+)
G91064 NA non-coding downstream 124054 39877719 ~ 39878366 (+)
G91066 NA non-coding downstream 124819 39878484 ~ 39878728 (+)
G90693 NA other upstream 873692 38877050 ~ 38879902 (+)
G90686 NA other upstream 1073507 38658366 ~ 38680087 (+)
G90583 NA other upstream 1698030 38054509 ~ 38055564 (+)
wfdc1 wfdc1,LOC102778323 other upstream 1718900 38022377 ~ 38034694 (+)
mt2 NA other upstream 3221598 36530973 ~ 36531996 (+)
LOC120563436 NA other downstream 118025 39871690 ~ 39874177 (+)
LOC120564712 LOC108250350,LOC108250755 other downstream 719183 40472848 ~ 40502827 (+)
gins3 gins3 other downstream 949516 40703181 ~ 40710433 (+)
smpd3 smpd3,LOC102789354 other downstream 1114056 40867721 ~ 40950165 (+)
LOC120563418 LOC101477895,LOC102304763,LOC106675229,LOC102199463 other downstream 1199841 40953506 ~ 40955947 (+)

Expression


Co-expression Network