Gene
RNA
| Item | Value |
|---|---|
| gene id | G91903 |
| gene name | bmpr1a |
| gene type | unknown |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053120.1 |
| NCBI id | CM020917.1 |
| chromosome length | 41568296 |
| location | 580807 ~ 593877 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| symbol | description |
|---|---|
| bmpr1a | Enables several functions, including ATP binding activity; SMAD binding activity; and protein homodimerization activity. Involved in several processes, including positive regulation of osteoblast differentiation; positive regulation of transmembrane receptor protein serine/threonine kinase signaling pathway; and positive regulation of vascular associated smooth muscle cell proliferation. Located in external side of plasma membrane. Colocalizes with caveola. Implicated in hereditary mixed polyposis syndrome 2; intestinal disease; and juvenile polyposis syndrome. Biomarker of pulmonary hypertension. |
| description |
|---|
| PREDICTED: bone morphogenetic protein receptor type-1A isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU123696 | True | 656 | TUCP | 0.60 | 5 | 580807 | 593877 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC120565788 | LOC100695038,LOC103366337,LOC107380922,LOC107082714,LOC105918713,LOC105028844,LOC106604646,LOC106611650 | coding | upstream | 421350 | 141925 ~ 159457 (+) |
| stx6 | stx6 | coding | downstream | 190322 | 784199 ~ 808239 (+) |
| LOC120565732 | NA | coding | downstream | 192825 | 786702 ~ 787874 (+) |
| wdr18 | wdr18 | coding | downstream | 238364 | 832241 ~ 854498 (+) |
| grin3bb | grin3b | coding | downstream | 292482 | 886359 ~ 955236 (+) |
| med16 | med16 | coding | downstream | 389774 | 983651 ~ 1009213 (+) |
| G91901 | NA | non-coding | upstream | 21994 | 557869 ~ 558813 (+) |
| G91900 | NA | non-coding | upstream | 23337 | 555301 ~ 557470 (+) |
| G91899 | NA | non-coding | upstream | 27180 | 552383 ~ 553627 (+) |
| G91895 | NA | non-coding | upstream | 70695 | 509096 ~ 510112 (+) |
| G91893 | NA | non-coding | upstream | 73531 | 506486 ~ 507276 (+) |
| G92013 | NA | non-coding | downstream | 90858 | 684735 ~ 685052 (+) |
| G92015 | NA | non-coding | downstream | 100556 | 694433 ~ 694750 (+) |
| G92018 | LOC103369104,LOC104936604,LOC101078280 | non-coding | downstream | 128238 | 722115 ~ 773957 (+) |
| G92022 | LOC104936604,LOC103369104 | non-coding | downstream | 171577 | 765454 ~ 768674 (+) |
| G92027 | NA | non-coding | downstream | 222705 | 816582 ~ 818325 (+) |
| G91887 | NA | other | upstream | 14341 | 455709 ~ 566466 (+) |
| G91897 | NA | other | upstream | 37898 | 541691 ~ 542909 (+) |
| G91827 | NA | other | upstream | 157155 | 83806 ~ 423652 (+) |
| G92019 | NA | other | downstream | 128496 | 722373 ~ 758976 (+) |
| G92146 | NA | other | downstream | 574944 | 1168821 ~ 1170046 (+) |
| G92157 | NA | other | downstream | 609010 | 1202887 ~ 1204046 (+) |
| trmt13 | NA | other | downstream | 626933 | 1220810 ~ 1228679 (+) |
| G92169 | dbt,LOC102778223 | other | downstream | 647510 | 1241387 ~ 1256194 (+) |
