G92070


Basic Information

Item Value
gene id G92070
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 1418749 ~ 1676140 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU123932
TCTCCCCTCTGCTCTATATCATCTGATATGATCAACACAAGGTTAATAAGACATGCACAGATACATGTGTAGTCACTTTATAAGTCAtccttcttaaaataaataaacgaaAAGGTACGAGTTCAgtcagaaaaacacagagaacaACCAGAGTTTCCAGTCCAGCCTGTAGTCCAGTCTGTGGTCCAGTCTGTGGTCCAGTCTGTGGTCCAGCAGCTCAGAGACATACAAGCTAAGATAAGCAGTCATGTTTTATAAGAGAGTATAGATGGCGTCCAATAAACACAGGCCATGCTTTCTACTTcctgtagaagaagaagaagaagaagaagaagaagaggaaggtaTAAACAGCCAGATGttgtaaacattcggggctcTGAGCCCAAaccgagcacacacacatttctgtccTACGTTACAGCGGATATTTGATAACAGAATTAATACCTCAAAATCTGTACATTAGTTAGAgacaaatgatgatgatgatgatgataggtACCAAAGAAAaaccttctcttctctctttctctccttctctctgtcaCTGTCCATGCAGACGTGTTTAATAAAGTTTATTAATATACAATCAGTCCTCTCCGTCCGAGGAAAAGTCCCATTCTgtcccaaagaagaagaagaagaagaagaagaa
>TU123933
TCTCCCCTCTGCTCTATATCATCTGATATGATCAACACAAGGTTAATAAGACATGCACAGATACATGTGTAGTCACTTTATAAGTCAtccttcttaaaataaataaacgaaAAGGTACGAGTTCAgtcagaaaaacacagagaacaACCAGAGTTTCCAGTCCAGCCTGTAGTCCAGTCTGTGGTCCAGTCTGTGGTCCAGTCTGTGGTCCAGCAGCTCAGAGACATACAAGCTAAGATAAGCAGTCATGTTTTATAAGAGAGTATAGATGGCGTCCAATAAACACAGGCCATGCTTTCTACTTcctgtagaagaagaagaagaagaagaagaagaagaggaaggtaTAAACAGCCAGATGttgtaaacattcggggctcTGAGCCCAAaccgagcacacacacatttctgtccTACGTTACAGCGGATATTTGATAACAGAATTAATACCTCAAAATCTGTACATTAGTTAGAgacaaatgatgatgatgatgatgataggtACCAAAGAAaaaccttctctctctctctttctctccctctctctctgtcactgtaCATGCAGACGTGTTTAATAAAGTTTATTAATATACAATCAGTCCTCTCCGTCCGAGGAAAAGTCCCATTCTgtcccaaagaagaagaagaagaagaagaagaagaagaagaagtaacCAGCTCGTTGCCAGTCACATATTTACGAGCTGGAACTAGTCCTTGCCAGACAGCAGCGTATCCATCCGCCCAGCGTCTCAGTGTGTCTCCAGAGAGGCTCTGTTATATGAGTGTATAATGTCTCAGAAGTctgtagctacacacacacacacacacattctccctCCCATCTCCTAAAATACAGACGCCTGGTCAGGTGACTTTGCCGTTGTTATGGACAccaaaagtctcctttagcgccaGATCTAAACGCCTTTAGCCAGGACTGCTGGCGTAACCTTTTGACACAGTTCTGTGAAGGAAAAGCTCGTGGGTGTGCTTATAGAAAGGTACGTTTATGGGACCTGAtgcccggtctcctgggtgattGTCGCCCCCCCCCCACGACCAACCcccctacgcagattttcggcctttcatacgtagcatgacgtagcattaagagctaGCACGCTGaaggcagtccctccagaaaaaaatgcgattatgcgacAGCATAATTCAAcccataatcagccaaagtctgcatatttatatCAAAttcgccgcactttcgccgcataaattgccgatttccacgcaaaatatttGGGGCTTTGCACGATTTCATAAttcccgcattttcgttgcaaaaaagtcccataatatatctcagCAGGAAGTTGATaaattttgcgtttacttcacacaagagcagccattttccagTCCTTTcagaaaaacgcagagtttttttgtgattacaCAATTACAAAACTCCTAGATTATGcgccacgttttcttaaaaaatgcgatatttatgcaattttatgcgatgaaacttgcaaaaactgcagtttgatgaaaaagagaagaaaaagtgactCCCCCAACACTTaattaaaacttaatttccaaaaatagtttacagatattcagtcattgcaataagtaaacaaataagatacaaaaatatatacaaataatataatatgaaagtaaaaataaaagtaatagctaGTCTaaacagggaaataaaagatacaaaagagacagactttcaaaaatc
>TU123934
TCTCCCCTCTGCTCTATATCATCTGATATGATCAACACAAGGTTAATAAGACATGCACAGATACATGTGTAGTCACTTTATAAGTCAtccttcttaaaataaataaacgaaAAGGTACGAGTTCAgtcagaaaaacacagagaacaACCAGAGTTTCCAGTCCAGCCTGTAGTCCAGTCTGTGGTCCAGTCTGTGGTCCAGTCTGTGGTCCAGCAGCTCAGAGACATACAAGCTAAGATAAGCAGTCATGTTTTATAAGAGAGTATAGATGGCGTCCAATAAACACAGGCCATGCTTTCTACTTcctgtagaagaagaagaagaagaagaagaagaagaggaaggtaTAAACAGCCAGATGttgtaaacattcggggctcTGAGCCCAAaccgagcacacacacatttctgtccTACGTTACAGCGGATATTTGATAACAGAATTAATACCTCAAAATCTGTACATTAGTTAGAgacaaatgatgatgatgatgatgataggtACCAAAGAAaaaccttctctctctctctttctctccctctctctctgtcactgtaCATGCAGACGTGTTTAATAAAGTTTATTAATATACAATCAGTCCTCTCCGTCCGAGGAAAAGTCCCATTCTgtcccaaagaagaagaagaagaagaagaagaagaagaagaagtaacCAGCTCGTTGCCAGTCACATATTTACGAGCTGGAACTAGTCCTTGCCAGACAGCAGCGTATCCATCCGCCCAGCGTCTCAGTGTGTCTCCAGAGAGGCTCTGTTATATGAGTGTATAATGTCTCAGAAGTctgtagctacacacacacacacacacattctccctCCCATCTCCTAAAATACAGACGCCTGGTCAGGTGACTTTGCCGTTGTTATGGACAccaaaagtctcctttagcgccaGATCTAAACGCCTTTAGCCAGGACTGCTGGCGTAACCTTTTGACACAGTTCTGTGAAGGAAAAGCTCGTGGGTGTGCTTATAGAAAGGTACGTTTATGGGACCTGAtgcccggtctcctgggtgatagTCCCCCCACGCAAGATTTTCGACCTTTCATACGTagcatgacgtagcattaagagctaGCACGCGAAGGCAgcgtccctccagaaaaatgcgattatgcgataGCATAATTCAacataatcagccaaagccCATATCTATATCACCAACGCACTTTGCGCctcataaattgccgatttccacgcaaaaatATTTGGGgctttgcatgatttcataattcccgcattttcgttgcattaagtcccataatatatctcagcaggaagttgaaaaatgttgcgttcacttcacacaagagcagccattttccagtccttccagaaaaaaagCGAGCCAAATGTTTTGTGATTCTTGAGGCAAAACTCCTAGATTATGCGCAcgcgttttcttaaaaaatgcgatggaatattcTATatgtgatatttatgcaattttatgcgatgaaactTGCAAAAtggcagtttgatgaaaaagagaaaaAAAAGTGACTGTTTGAATCCCTCGGGGACGAACCGAGTCTTTAGTCCAGACTGAAGCCGAAACCGGGACCCAGACGCTCCAGGTCTTGGTGTGTCGCAGCTTCCATCGGGCCCAAAACCCTCTCAAGATACCGAATCACTTCAGTCCATCACCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU123932 False 658 lncRNA 0.40 2 1418749 1648238
TU123933 True 1723 lncRNA 0.41 3 1418749 1420539
TU123934 False 1678 lncRNA 0.44 5 1418749 1676140

Neighbor

gene id symbol gene type direction distance location
LOC120566171 LOC108248660 coding upstream 37835 1322405 ~ 1380914 (+)
plppr3b NA coding upstream 393606 1010747 ~ 1025143 (+)
med16 med16 coding upstream 409536 983651 ~ 1009213 (+)
grin3bb grin3b coding upstream 463513 886359 ~ 955236 (+)
wdr18 wdr18 coding upstream 564251 832241 ~ 854498 (+)
serpinc1 NA coding downstream 215414 1891554 ~ 1908999 (+)
LOC120565574 NA coding downstream 304698 1980838 ~ 1993868 (+)
dph5 dph5,LOC102795811 coding downstream 374822 2050962 ~ 2071903 (+)
LOC120565427 NA coding downstream 736091 2412231 ~ 2420605 (+)
LOC120565428 NA coding downstream 747847 2423987 ~ 2427127 (+)
G92183 NA non-coding upstream 5878 1391329 ~ 1412871 (+)
G92076 NA non-coding upstream 11067 1356878 ~ 1407682 (+)
G92084 NA non-coding upstream 15822 1385398 ~ 1402927 (+)
G92082 NA non-coding upstream 30872 1387509 ~ 1387877 (+)
G92069 NA non-coding upstream 33734 1381328 ~ 1385015 (+)
LOC120565416 NA non-coding downstream 23280 1699420 ~ 1700502 (+)
G92247 NA non-coding downstream 57426 1733566 ~ 1752952 (+)
G92248 NA non-coding downstream 67635 1743775 ~ 1777830 (+)
G92257 NA non-coding downstream 128329 1804469 ~ 1830857 (+)
G92274 NA non-coding downstream 276846 1952986 ~ 1953927 (+)
G92169 dbt,LOC102778223 other upstream 162555 1241387 ~ 1256194 (+)
trmt13 NA other upstream 190070 1220810 ~ 1228679 (+)
G92157 NA other upstream 214703 1202887 ~ 1204046 (+)
G92146 NA other upstream 248703 1168821 ~ 1170046 (+)
G92019 NA other upstream 659773 722373 ~ 758976 (+)
G92234 NA other downstream 20834 1696974 ~ 1804395 (+)
G92264 NA other downstream 191512 1867652 ~ 2000993 (+)
LOC120565570 NA other downstream 191581 1867721 ~ 1889087 (+)
LOC120565575 NA other downstream 312668 1988808 ~ 2025931 (+)
G92293 NA other downstream 396042 2072182 ~ 2076104 (+)

Expression


Co-expression Network