G92111


Basic Information

Item Value
gene id G92111
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 1047536 ~ 1062632 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU123998
TCAGAAGAGGGCTGCTCTCCTTTAAAGTTAATATCGCGATCATCAtttgacacacagctgggttcaggttcaggtccaGGGTCAGGCTCAGGGTCAGGGTCAGGGTCAGGGTCAGGGTCAGGGTCAGGTCCAagtccaggtccaggtccaggtccaggtccaggttcaggttcaggtccaggtccagggtCAGGGTCAGGGTCAGGGTCAGGGTCAGGGTCCAGGTCCAGGTTCACGTTCAGGTCCAGAttcaggtccaggtccaggtccagctccaggtccaggtccagggtCAGGGTCAGGGTCAGGgtcaggtccaggtccaggttcACGttcaggtccaggtccaggtccaggtccaggtccagggtCAGGGTCAGgtccaggttcaggttcagGTTCAGGTTCACGTTCACCttcaggtccaggttcaggagaCTCTGGTTTTGGATGGGTcctaatagaaaaaaaacatttatttaggaTCACATGTTCAGTTAAAGTCTTCCTGCTTAAAATATGAGGCCTCTATCTGTAGGCCTAATTATTACCATTTAAATGCCAATAATGCTTTACTTTCTGTCCAAAACTCAATAATAATATCTTTTGAAatcagaatgaaaaaaaaaatctaaacataatatttcaaaatgttgtcTAAACAGAAAGATATTTTGAGTGAGACAGGAAATTATTTAGCAAAAAGATATTCTCATTTCAGTCTTTCAAACTTTATTTGAAGGACTATGCATGAGACTGACATGACCCGAAACAACCCAGACGGGACGTAGTTCCATCAAGTGAGACTCGGTCCAGTTTACTGGATGTTCACAACTCACCTCAATCTTCTTCTTAACATTTCAATTTCCCTTTCCATTGCTATTCTCTCCTTCTGCCATTCATGTCTCTCCATCAatcctctctcctccatttcAAGTAGCCTCTCCTCCATTTCAAGTCGCCTTAcaggtcttttttttaagtagcaGTGTCTCCATGGACACaactgggttcaggttcaggttcaggtccaGGTTCAGCAGGGTCTGTTCTCTTATGCGTCctctagtcaggccaatgacatcgtgtatagagtcgatgggcggggcttatggctgctgctgctactggagaacagcggtcttctggaagacttggagttaaac
>TU123999
TGCAAAGAGATATTCTCatatcatggtgcaaaggaccctagggtaaattacgccgaaccatcactttaacatttcAATTTCCCTTTCCATTGTTATTCTCTCCTTCTGCCATTCAAGTCTCTCCCTCAATCTTCTTCTTAACATTTCAATTTCCCTTTCCATTGCTATTCTCTCCTTCTGCCATTCAAGTCTCTCCATCAatcctctctcctccatttcAAGTTGCctctcctccatttcAAGTAGCCTCTCCTCCATTTCAAGTCGCCTTAcaggtcttttttttaagtagcaGTGTCTCCATGGACACaactgggttcaggttcaggttcaggtccaGGTTCAGCAGGGTCTGTTCTCTTATGCGTCctctagtcaggccaatgacatcgtgtatagagtcgatgggcggggcttatggctgctgctgctactggagaacagcggtcttctggaagacttggagttaaac

Function

NR:

description
nuclear inhibitor of protein phosphatase 1

GO: NA

KEGG:

id description
ko04972 Pancreatic secretion
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU123998 True 1166 lncRNA 0.47 4 1050203 1062632
TU123999 False 472 lncRNA 0.45 4 1047536 1062632

Neighbor

gene id symbol gene type direction distance location
plppr3b NA coding upstream 22393 1010747 ~ 1025143 (+)
med16 med16 coding upstream 38323 983651 ~ 1009213 (+)
grin3bb grin3b coding upstream 92300 886359 ~ 955236 (+)
wdr18 wdr18 coding upstream 193038 832241 ~ 854498 (+)
LOC120565732 NA coding upstream 259662 786702 ~ 787874 (+)
LOC120566171 LOC108248660 coding downstream 259773 1322405 ~ 1380914 (+)
LOC120565564 LOC102210819 coding downstream 475367 1537999 ~ 1574777 (+)
LOC120565565 LOC108250349,LOC108249964 coding downstream 562942 1625574 ~ 1630680 (+)
sid1 NA coding downstream 573331 1635963 ~ 1637498 (+)
serpinc1 NA coding downstream 828922 1891554 ~ 1908999 (+)
G92109 NA non-coding upstream 1437 1045663 ~ 1046099 (+)
G92066 NA non-coding upstream 63491 900221 ~ 984045 (+)
G92095 NA non-coding upstream 76015 970873 ~ 971521 (+)
G92093 NA non-coding upstream 81886 964768 ~ 965650 (+)
G92062 NA non-coding upstream 186833 860473 ~ 860703 (+)
G92071 NA non-coding downstream 40560 1103192 ~ 1301580 (+)
G92078 NA non-coding downstream 43517 1106149 ~ 1129822 (+)
G92085 NA non-coding downstream 48786 1111418 ~ 1211840 (+)
G92144 NA non-coding downstream 90642 1153274 ~ 1154717 (+)
G92087 NA non-coding downstream 119914 1182546 ~ 1211478 (+)
G92019 NA other upstream 288560 722373 ~ 758976 (+)
G91903 bmpr1a other upstream 453659 580807 ~ 593877 (+)
G91887 NA other upstream 481070 455709 ~ 566466 (+)
G91897 NA other upstream 504627 541691 ~ 542909 (+)
G91842 NA other upstream 704844 257904 ~ 342692 (+)
G92146 NA other downstream 106189 1168821 ~ 1170046 (+)
G92157 NA other downstream 140255 1202887 ~ 1204046 (+)
trmt13 NA other downstream 158178 1220810 ~ 1228679 (+)
G92169 dbt,LOC102778223 other downstream 178755 1241387 ~ 1256194 (+)
LOC120565410 camk4,LOC102194929,LOC102785978 other downstream 401087 1463719 ~ 1535856 (+)

Expression


Co-expression Network