G93437


Basic Information

Item Value
gene id G93437
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 5488294 ~ 5492457 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU126089
AAAGTTCTGTTGTGCATATGTTTtataccgtgtgtgtgtgagagtgtgttttCGGATTCGTTCGGGACACCCTGCTACCTGTGTATGTGGCCGAGCTCTCCCTGTGTCGGGCGTCAGGCTTTGCACAAAACCTTTATCTCATTTGTCAaacaaaagcgacaaaaaaaaaaaatcactaaaaAGGAAAGCTGGTCGAGGCTGTTGGACCGCTGACCGCCGTGGTTGCTTCAACCTTAAAACACAGTTAGCCTGTTAAAATCAATCCCttatggttttgtgtgtgtgtgtgtgtgtgtgttttctttttctcttggGTATACCACCTTTTATTTCATCCGTGTCGTCCTGATCTTTTCCCCGTTCATTCAAAAGCGAGAAAACtggttgtttgtttggtttgttttgacGTTTTCTGAGAAAATCACCTTTCATCGAGCGCACGCCGAGCCCGAGTCCGCTCGCGTGTCGCCGTACATTTGAGCGTTTTCCCGAGGAAGCGGGATGTTAAGATGAACTGGACCTCCTTCTGTGTTTGGTGTCTTTGCCGGGCTGGCGTAGAGCCGACTGACTGAGAGCTCACTTTAAAAAGACACCGTTGAACTGACGTCAACACTGACTGTGGCGATCTCTGTAATATGTTTACATGTTCCTGttttgtatctttgtgtgttttgggttgttgttgttttgttttttttgtcaatggAACATGTTGCCTGTAGCAATCAAACCTCCTCTGACAAGGCTGTAGAATAATTACCGACTCCTGATCGTAGCGCTGTGCGATGACGGGCTCTCCCGTGACGGACGGCGtgtagaagaggaggaaggtttTCGGCGCACACGTGTCGAAATCGTCTCACAACGGCGCAGAAGTGTGTTAACAGGTGTGTCTGTGGGAACCGATCAGAGGCGTTGAGACTCGTGGGGAAGGAAGCACAGCTCCCTGTTGAGCTGATTTATGTGCAGTATGTTGCTTCGGCCAATCAGACGGTCAGGAAGCTGACGGGTTTCAGAGTGCGTTCCGTTTACCTCGGGACTCGGGAGCCGGAGCTGGGAgtgacgtcacacccgagtgaaatgcgttccatttacaagtcggatTTTTCATTGTGGCATGGGCCGAatttatggggggggggggaacaggactaaccccaccccccccaaaataatcaaaactgggctttgtctttttgtttttgatccttttaacaacatttttgctgccttttttgatgtttttgtagctttttccagaaaaattgactttttttgttgacATTATTGTCGCAATTTATGTGTTTTTGGTGCTTTAGTgatttctgttttgtgttttttgtgataCACGATCTCAACCCCTCCCCCGCccatgttgaacccaaagttatgcCCTTGCATTGTGGGGTTGGCTCCagctagccaggttagccatagTTAGCAATGCCACTTGATAACAACCGCATtacgcttttttttttgtccacgtgttttccgactttgacctcggataatccgacttccgagtacaaatggaacgcactgtCAAAAGCTGCTCCTGACCTTCGGTGGCGTCAGACTCAAATAGTTTTGTCGGATTAACCGACACCGCTGGATGGTTTTTCCCATACAGTACACAACACAAACGCCTTGCCTCTTAGCGCGGTATCACCTGGGGAAATAAGCTGATGATTTCTCCGCGACTAGGACAGATTTGTGAGCACTGAAGCCGTCATCTTTAAAGTTTCGAGCCCGAAAGACAAGTCTCGTCTGTGGATTTAAGTGAGCAACAAGTCGGTTTGGACTTTGATggccgttttatttatttttttgggtcTGGATCGGGCTCCAGGGAGATGAAATACCTGGATGTTCTATTCTCTGAGGCTGACCAATCTGGTGTCTGTCGTGGATTCAGATTCGATGAAACGTTATCGGACCTGAAGCCGAGCAAAATACGTGTTTTCACTTCACTTCTAAGCAACATCAGTGAGTTAATGAGGTCATGCTTTGAAAGAGATTATGATCCTTTGTGTTTAAGCGCTCAAAATCGGAGCGGATTTTAAAGTGGTGGCACATAAAAATCAGGATTTAGATAATAAAATTATCACTGTAGCAATATGTTGGGCGATGAGTTACGAAGAGAAATGTCAGTACAGACCTGCCAAAGATGTGTTTTAGGTGATGTAGAAACTGTGTTACCATGACGTAGTTGTTAAACTAAATATTGGCCGATAtatcaatcaaatcaaatatctGTTCCGTTGTCTCGAAATCCACTAAACAGCTCGTTTGTTGCTTTATGATTTGTCTGTTTGCTCTCGAATCCTGACTAAATTAATTACAGATTCATGAAATCCTGAAATTTGGTTCCTGCTCACTAGTTTTGGCGCTAAAAACCAATCTCTCAGTGCAGTAGTGGAGTTGTGATCGGCGCGTTCATCTCTTCACAGATCCAGCTCTGCGTTGTGATGGAGCACAGCTGTCCACGCCGGCGGCTGCAGTTGGGATTTTTCTGTGCGTAATTGATTGTGTGTAATCACGCACCCTCCGGTGGATCTGCTCTCAGCTGGTCGTCCTAACACGGACAGctgcctcacacacacacacacacaaacacacacagatcaataCTTGTGCCATCTAATATCGTGTTGTCCGTTTCACCGTTTCCGCTgacattacaaacacacacaccctctcccGGGTGTGAAGTTGACGGTCCAGGCGTCTGCCGGAGAGTAAAGCAGCTGTCAGGTTCCCCGGTGGAGTCATTAATCTCCGGCCCCCGAGCCTGTTGACCGCCGCTCGGCCTTCCTccgcccccgccccccccccggCCCGGTCCGCTCGCTTCAGCAGTTAACACGCTTAGCGGTTTGTTCGACCTGCGGCCTGTGTTGTTTACCCATCATGCACGACGCCCACAAACCAGACCCTCCGCTACGGAAGGCGCCAGAAGTCAAATTGAAACTGTAATCAGTCTGAAAGTCAGAGCTCGGTGCTCGTTAGGGCCGTTTGTGCCGATACAAAACCTGCTTTTGTTACGGATACCAAATGGcacattttaatatattattatgaaaaataaaagcatttttcAACATTCAACAAAGATGAAAAACTTctcaaatgttaaatgttgtacaaacacaaacatcttTTTTAATCTTTACTTTGAAACTGACTTAAATCAGGAACCATTTGATTAAACAATAAGTTTTCAAGATTATTATTCAATTCCAGATTCCAGTACGTGATAGTTAATGATACCACGGACACATTTCACCCAATCAGGAGCTCAGAATTTGCAGACAGATCTTATAGCTAATCTATTTTTAGTTTTGACAGTTTTGATTAACTTCCAAACATATCAGTGATTCCTGTTGAATCCTTATTGATCTCAACCTTCCAACTGATTGGCTCGTCGTGTTTTCAAAAGGTCAAAATTTGCTGAAACAGCAGCAGGAAACTTTGGAGATGTTTGAAATCTgtcattgaattttttttagattgacTAAATGTGAAATTTCTGCCTGTTTTCAAGCAGCAGTTTGGTCAGTAAAACGCTTGGACCAAACCAGGATGTCAAGCATTTAAAACGTGTGCAGATGTCCCTGCCCGCTACCAAATATCAAATCGTGACATGCAGATTGAAGCGCGAGTTGGGTTTTTGTCACCAATGTGCTTCCGTACGTCTCTAAGCTTGTAGAGTAGccagctctgtctgtctgtctgtgaggcACATAGATGATTTAAACATGATGAAGCCTTATTACcactattacacacacacacacacaagcacgcacacactcatgcacacacacacacgttctgaACCACCGTTGAGATTCAGTGATGTTTTAATGTGCAGTCAGTAGGCTAAAGCTCGTCTCAGGACTCTTGTGAACTGGAGTCTTGCAGACGAGGGCAGTATTTCCAAGCCGTGTGTTGTGCGTTTGTCTTTAAAGAGTGATGAAGAAGATGAGGAAGGTGATTCAGCTGTGCACCGTAAAAGCTTGAGGAAGAcgctaagagagagagagagaaaaaacattgCTAGAGTAAAACCAGTGcaatatctttttattttttaatgtggtAAAAGCATGTTGTTGTCAATCTTACCTTACAAcaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU126089 True 4141 lncRNA 0.45 2 5488294 5492457

Neighbor

gene id symbol gene type direction distance location
mast2 mast2,LOC102294889,LOC102799744 coding upstream 1409 5211170 ~ 5486885 (+)
LOC120566192 NA coding upstream 286419 5024510 ~ 5201875 (+)
prrx1b prrx1 coding upstream 487854 4966559 ~ 5000440 (+)
gorab gorab coding upstream 541987 4934761 ~ 4946307 (+)
mettl11b mettl11b coding upstream 614938 4852948 ~ 4873356 (+)
LOC120565642 tspan1,LOC104930558 coding downstream 510354 6002811 ~ 6029193 (+)
LOC120565748 NA coding downstream 575226 6067683 ~ 6071247 (+)
tut4 zcchc11 coding downstream 769763 6262220 ~ 6290119 (+)
LOC120565762 LOC102311032 coding downstream 843294 6335751 ~ 6345081 (+)
cyldl NA coding downstream 1135185 6627642 ~ 6641120 (+)
G93441 NA non-coding upstream 76936 5400131 ~ 5411358 (+)
G93439 NA non-coding upstream 81052 5353344 ~ 5407242 (+)
G93462 NA non-coding upstream 81547 5400817 ~ 5406747 (+)
G93448 NA non-coding upstream 160061 5327985 ~ 5328233 (+)
G93432 NA non-coding upstream 387560 5062327 ~ 5100734 (+)
G93541 NA non-coding downstream 104313 5596770 ~ 5660805 (+)
G93609 NA non-coding downstream 472355 5964812 ~ 5965059 (+)
G93640 NA non-coding downstream 722611 6215068 ~ 6215735 (+)
G93644 NA non-coding downstream 748738 6241195 ~ 6242158 (+)
G93700 atpaf1,LOC102780159 non-coding downstream 897699 6390156 ~ 6398997 (+)
trmt1l trmt1l other upstream 775061 4685224 ~ 4713233 (+)
LOC120565391 NA other upstream 1174779 4284755 ~ 4313515 (+)
G93150 NA other upstream 1270468 4174602 ~ 4217826 (+)
frem1b LOC100693369,LOC101486624,LOC102206675,LOC102294239 other upstream 1664512 3714919 ~ 3823782 (+)
G92848 NA other upstream 1881469 3600978 ~ 3606825 (+)
G93613 NA other downstream 542912 6035369 ~ 6051520 (+)
G93638 NA other downstream 709628 6202085 ~ 6214017 (+)
rhpn1 rhpn1 other downstream 862435 6354892 ~ 6381598 (+)
G93938 NA other downstream 1857353 7349810 ~ 7350587 (+)
LOC120565294 pycrl other downstream 2386462 7878919 ~ 7890177 (+)

Expression


Co-expression Network