G93896 (LOC102798054,LOC101466326,LOC100702846,LOC102303795,LOC102210503)


Basic Information

Item Value
gene id G93896
gene name LOC102798054,LOC101466326,LOC100702846,LOC102303795,LOC102210503
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 7156335 ~ 7156719 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU126671
ctccactctCACTTTCTTGTTAACCACGATCACAATGAAGAAAGTATCCGTCACACCGTTGCCGTGGGGACAGAGGGCAGGTACCTGGTGGCGCTGGAGGAGGTGGTTGGTTTGGCCGTGCTCGGGCTCGGGGTCCTGGCCGTAGCGTAGGTGGTCACGGAGGGGGCGGGGCTCAGCCTGGTGCAAACGCTGCCCTGGGTGAACGCGCTGAACCGCCGCTCGCCGTTGCCAGGCTGCTGCTGGATATGAGGTGGTCTGCTGCCGTGCCTGCGCCCTTCCAGGAAGTATGTGAGCATCTGACCTTTGCCCTTCACGCTGACCTGGCCCCGGCACACAAAGTTGTAGTGGTCTGTGAGGAGACGGTGAACCTCCTCTGTCACCTGGA

Function

NR:

description
PREDICTED: adenylate cyclase type 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU126671 True 385 lncRNA 0.62 1 7156335 7156719

Neighbor

gene id symbol gene type direction distance location
igfbp3 LOC103358919 coding upstream 29063 7108149 ~ 7127272 (+)
si:ch211-191a24.3 LOC103358916 coding upstream 88401 7007170 ~ 7067934 (+)
si:ch211-191a24.4 LOC104966872 coding upstream 185035 6965547 ~ 6971300 (+)
ghrhrb LOC100710271,LOC101475240,LOC103357300 coding upstream 433058 6672071 ~ 6723277 (+)
cyldl NA coding upstream 515215 6627642 ~ 6641120 (+)
LOC120565613 NA coding downstream 106828 7263547 ~ 7285759 (+)
LOC120565797 slc22a23,LOC102794535 coding downstream 197129 7353848 ~ 7379344 (+)
LOC120566053 dusp22 coding downstream 241419 7398138 ~ 7413692 (+)
LOC120566212 irf4,LOC104941070 coding downstream 258722 7415441 ~ 7423820 (+)
foxq1b foxq1,LOC104946962 coding downstream 423473 7580192 ~ 7581837 (+)
G93888 LOC104954812,LOC103358918,LOC104927721,LOC102210208 non-coding upstream 21903 7131348 ~ 7134432 (+)
G93851 NA non-coding upstream 25584 7127314 ~ 7130751 (+)
G93834 NA non-coding upstream 163173 6992856 ~ 6993162 (+)
G93823 LOC104966896,LOC108248355 non-coding upstream 178789 6975644 ~ 6977546 (+)
G93820 NA non-coding upstream 180967 6974307 ~ 6975368 (+)
G93906 NA non-coding downstream 76427 7233146 ~ 7235719 (+)
G93912 NA non-coding downstream 115217 7271936 ~ 7287153 (+)
G93931 NA non-coding downstream 162123 7318842 ~ 7321455 (+)
G93932 LOC103399850 non-coding downstream 165347 7322066 ~ 7323426 (+)
G93933 NA non-coding downstream 170452 7327171 ~ 7327686 (+)
rhpn1 rhpn1 other upstream 774737 6354892 ~ 6381598 (+)
G93638 NA other upstream 942318 6202085 ~ 6214017 (+)
G93613 NA other upstream 1104815 6035369 ~ 6051520 (+)
trmt1l trmt1l other upstream 2443102 4685224 ~ 4713233 (+)
LOC120565391 NA other upstream 2842820 4284755 ~ 4313515 (+)
G93938 NA other downstream 193091 7349810 ~ 7350587 (+)
LOC120565294 pycrl other downstream 722200 7878919 ~ 7890177 (+)
LOC120565614 NA other downstream 739426 7896145 ~ 7905247 (+)
G94073 rgs5,LOC107393027,LOC104951458,LOC100708109,LOC105932873 other downstream 1080651 8237370 ~ 8286436 (+)
G94199 LOC103367571,LOC102312400,LOC100710958,LOC101467655 other downstream 1990443 9147162 ~ 9168877 (+)

Expression


Co-expression Network