LOC120565614


Basic Information

Item Value
gene id LOC120565614
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 7896145 ~ 7905247 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU126885
tatttttttattttttttacaccaaaTTACATTACCTGACATTTTTAGGCACAAATGACTTGCAGTTGTTCAGATTTTAAATCTTGATGCAGTCTGTCCACACTGCACATAACAGCCATGAGATGAGGAGGTAGATGGCAAATGTACAAGATTTGAAATGACAGAGCTACAAAGAACATTGCACATTTAATCTTTACAAAGTAAAGGATAAATTGGTTTTGACTTCAAATCATTTTCTTTAAGGATGTTGGCGCTAACAGCATTCTGCAAGACATTGCTCGGGCCCGGGAGAACATCCAGAAATCTCTAGCAGGAagcagcagcagtgcaGCTGATCAAGGAGAAATCATCTGTCGCATAAAGAGCCTGGAGCTGGAGAACCACAGCTTACACAAAGTGGTGGATGATTTGAGGGCTGCACTTTCCAAACTGGAATGTCGGGTATCCGTTCTGGAGAAATCTCCTGCAGCTGTGACCCCTGTTACCACTCCTTCAGTACCCTACACAAATGGCACTACTGTCCAGCAGAAGACCAGCGCCCCGGTtaaagatgaggaggaagatgatgatgatgatattgaccTGTTTGGTAGTGATGATGACGAAGAGGCAGATAAACTCAAAGAGCAGAGGTTGAAGGAGTATGCAGAGAAGAAGGCCAAGAAGCCAGGCATCATCGCCAAGTCTTCCATCTTATTGGATGTCAAACCTTGGGACGATGAAACTGACATGGTGAAGCTGGAGGAGTGTGTGCGCTCGGTGCAGGCGGACGGCCTGTTATGGGGCACGTCCAAACTGGTTCCTGTCGGTTACGGCATCAAAAAGCTCCAGATCGCATGTGTGGTGGAGGACGACAAGGTGGGAACGGACATGTTAGAGGAAGAGATCACCAAGTTCGAGGACTATATCCAGAGTGTTGACGTAGCAGCTTTCAACAAGATCTGATTCcagtgtgtctctttgtgtctttcgTCACGCCTTGTTTCTCTGCTGATTGTGTCAAtggttaataaaaacaaactccTGCACTTGTTTAATGTGTTCTTGTCCTATTTTCTTGTCAGATAAATACTTACCTCTTGTGGGACACGCAGATAGTTTGGGTTTAATTTGTTGAGATGAAGCAATTCTGTTA
>XM_039811516.1
ATGATGTCAAAGAAGATTCCCCAGTGCTCTGCTCTGGATCAGTCAGAGCATGATCAGCCTCTCAGCCATAGTCAGGTTGACCGGTCCGCAAATGCACTGGGGTCTAGGAACCAAGCTGAATCAGGTCATAGAAATGGAGAGACGGCGTCTTCTTCCCCAGAGAGCGGCAGCTTGAACGGAGACGGAAAGCGCAGCGGGAAAAGCCGCCGCCGCAAGAAACGTTCATCCAATCCCGAGAGTCGCTCTGAGGGGAAGGTTGACACTAAGACCAAGAATGGCGAGAAGCCAGACAAAAGGACCAGCCAGCCACCATCTGACCCCCGCACCGGGCTGATTGGCCTGCAGTCTGAGTGTGCTAGTGTTTGGTTTGACCGCAGCGTCTACGAGCAAGCCGAGAGCCTCTACCAGTGCTGGTTGGCGAGCTCCTCCAGCGGGACCACCAAGTCAAAGCGGTCGCCGCCAGCCCCGGGGAATCTCTCAAACACTCCATCCGCTGCGGCTCCATCTTCCTCAGGACAGGTGTGCCACCATGGCGATCAGGTGGCCTGCCACCACGTTGTCCAGTCGGTGTGGGTGAACAAGACGACCTTTGACCAAGCAGAGCGCCGCTTTGTTATAGAATCCGTGCAGCCGCCTATTCCAAACTCTCTGAACCTTCCATCTCCGCCTAACCGCTCCATTGCACCCAGAACACCTGATGAAGGATATCAGTCTCTAGCCCCGACACCTGCAACCCCTGTCATCCAACAAGCAGCTGTCACGCCGACCGGTCGACAATCGATTAACGGGCTGCCCCGCATCCCCGTGGAGCTGCTTAGAGACGTGTGGCTGGAGAAGCCGCTGTATGACCGCGCCGAAGCAGCCTTCTACCAGAATTTGTACGGCAACAGTTCCTCCAAACGCTCCAGCTGCGCCTCCACTTCCAGAAGTAGCGACCACCCTCAAAGCCTtgtagaagaggaggaggagggggaagaaGAAGCCGAGGAAGTGGCGGTGGAGGAAAAACATGTGGTCCCGCAAGGTAAAGCAGAAGTCTTCCACGCTCTGCTCCCTATTCAGGAGGAAGATGAGCCAGCTGAGGTCTTGGAAAAAGAAGTTTCGGGGGCTGGAGTCTGCTTCTTATTGTTTTTTGcaaggagggggggagggggtgtggTGTTTGGACTTCAAATCATTTTCTTTAAGGATGTTGGCGCTAACAGCATTCTGCAAGACATTGCTCGGGCCCGGGAGAACATCCAGAAATCTCTAGCAGGACTGAAGACAACACTGTGTAACAGAGGGTCTGGTCAGCCTTCCCTGAGCCAACAGTCCCAGCTTagcagcagcagtgcaGCTGATCAAGGAGAAATCATCTGTCGCATAAAGAGCCTGGAGCTGGAGAACCACAGCTTACACAAAGTGGTGGATGATTTGAGGGCTGCACTTTCCAAACTGGAATGTCGGGTATCCGTTCTGGAGAAATCTCCTGCAGCTGTGACCCCTGTTACCACTCCTTCAGTACCCTACACAAATGGCACTACTGTCCAGCAGAAGACCAGCGCCCCGGTtaaagatgaggaggaagatgatgatgatgatattgaccTGTTTGGTAGTGATGATGACGAAGAGGCAGATAAACTCAAAGAGCAGAGGTTGAAGGAGTATGCAGAGAAGAAGGCCAAGAAGCCAGGCATCATCGCCAAGTCTTCCATCTTATTGGATGTCAAACCTTGGGACGATGAAACTGACATGGTGAAGCTGGAGGAGTGTGTGCGCTCGGTGCAGGCGGACGGCCTGTTATGGGGCACGTCCAAACTGGTTCCTGTCGGTTACGGCATCAAAAAGCTCCAGATCGCATGTGTGGTGGAGGACGACAAGGTGGGAACGGACATGTTAGAGGAAGAGATCACCAAGTTCGAGGACTATATCCAGAGTGTTGACGTAGCAGCTTTCAACAAGATCTGATTCcagtgtgtctctttgtgtctttcgTCACGCCTTGTTTCTCTGCTGATTGTGTCAAtggttaataaaaacaaactccTGCACTTGTT

Function

GO: NA

KEGG:

id description
ko03010 Ribosome

RNA

RNA id representative length rna type GC content exon number start site end site
TU126885 False 1135 TUCP 0.44 6 7898672 7905247
XM_039811516.1 True 2042 mRNA 0.54 8 7896145 7905146

Neighbor

gene id symbol gene type direction distance location
LOC120565295 tsta3,LOC104953080 coding upstream 22159 7868591 ~ 7873986 (+)
LOC120565646 LOC103354728,LOC102290039,LOC107394705 coding upstream 28417 7862214 ~ 7867728 (+)
LOC120564954 foxc1,LOC104932399,LOC104963658 coding upstream 290515 7603460 ~ 7605630 (+)
foxf2b foxf2,LOC102792585 coding upstream 305846 7586141 ~ 7590299 (+)
foxq1b foxq1,LOC104946962 coding upstream 314308 7580192 ~ 7581837 (+)
rgs4 NA coding downstream 303206 8208453 ~ 8214500 (+)
LOC120564973 LOC103367494,LOC104965670,LOC104935957 coding downstream 1116270 9021517 ~ 9033680 (+)
LOC120564878 NA coding downstream 1152094 9057341 ~ 9062036 (+)
LOC120566074 LOC104935955,LOC103367504 coding downstream 1161931 9067178 ~ 9070676 (+)
LOC120564889 rgs2,LOC103367537 coding downstream 1175612 9080859 ~ 9083857 (+)
LOC120565893 NA non-coding upstream 427 7892224 ~ 7895718 (+)
G93986 NA non-coding upstream 280718 7557254 ~ 7615427 (+)
G93985 NA non-coding upstream 370802 7524990 ~ 7525343 (+)
LOC120566054 NA non-coding upstream 500867 7394373 ~ 7395278 (+)
G93933 NA non-coding upstream 568459 7327171 ~ 7327686 (+)
G94056 LOC104961454 non-coding downstream 48168 7953415 ~ 7955102 (+)
G94057 NA non-coding downstream 86041 7991288 ~ 7991555 (+)
G94059 NA non-coding downstream 197746 8102993 ~ 8103363 (+)
G94060 NA non-coding downstream 198243 8103490 ~ 8103804 (+)
G94062 NA non-coding downstream 245215 8150462 ~ 8150870 (+)
LOC120565294 pycrl other upstream 5968 7878919 ~ 7890177 (+)
G93938 NA other upstream 545558 7349810 ~ 7350587 (+)
rhpn1 rhpn1 other upstream 1514547 6354892 ~ 6381598 (+)
G93638 NA other upstream 1682128 6202085 ~ 6214017 (+)
G93613 NA other upstream 1844625 6035369 ~ 6051520 (+)
G94073 rgs5,LOC107393027,LOC104951458,LOC100708109,LOC105932873 other downstream 332123 8237370 ~ 8286436 (+)
G94199 LOC103367571,LOC102312400,LOC100710958,LOC101467655 other downstream 1241915 9147162 ~ 9168877 (+)
LOC120566011 NA other downstream 1479258 9384505 ~ 9543535 (+)
G94239 NA other downstream 1647049 9552296 ~ 9557568 (+)
G94281 NA other downstream 1912374 9817621 ~ 9879198 (+)

Expression


Co-expression Network