G94073 (rgs5,LOC107393027,LOC104951458,LOC100708109,LOC105932873)
Chromosome Information
| Item |
Value |
| chromosome id |
NC_053120.1 |
| NCBI id |
CM020917.1
|
| chromosome length |
41568296 |
| location |
8237370 ~ 8286436 (+) |
| genome version |
GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
Sequence
>TU126919
cccactctataatttacaaagccctaacaattccagtaattcccccaagagcaagctttagcagtggctattgcgacagttgCGAGGAAAACTcgcttttaggaagaaacctcggcagacccagactcttggtaggcggtgtctgacggggccggttgggggttaacattttttcattattaaaataacaaatttggAGGACTTTTTGGCCTCCGCATCGGTATGTGTTCACTGAGTAGTCTGCGTGTTAGTTTTTCATCGCAGTCTTAAAGTCACAAGATGCTTCTAATGTACACACATAATGAATAGGTatcaaatgaagaaaaacaaagtgacaGTTGAAAGTCAGGAGTTTCCTCTTTTATAACAGTGAAACGATTCTGGGAAGAGTCCTTGCCATCTCCCTATTCAAAGAATCATGGAttccattgttgtttttaagAATAACTTAGACACAATTTGTTGTAAATAGTTgatatttacacacaaaaataaatacatcttcAGGAATTGTAtgcatatatatttttatgtggTCGACTCCAGAATGTACATGCAAGGCTACATCAAATAATGCATACTCAGCACTGTTAAAGCCCTTATTGAGTTTTCtttgagttttctttttctttctttgttgatTTGTATGACGCTTAAGGTTATGACACCAGACTGGCTAATCTGTGCCACAATAAACTCTTATTGATGctgtttaaaattaaaataaatctctcagattttttttttttttgatttcttGGTTGTTCCAATGAGTAATTGACATAATCAGTGAATACGTTTACAAGTTAGAATGTATGTCACTCCTGATCAATTTTGCTTTTAGTTTTTGATTAGTGCACAATACTTGCATTTTAGGGAACAATAAGGACTTGTAAAATGCTGAATATCTAGATAACAATATTCCTGTGTTGGTTAAGACATTATGCTTttgtttaatataaaaaagcatAAAAGACTAAATATTATCACACTTTATAACTGCTACATTCAACTAAATGTATACATTTAGGACACTTAAACATTGCACACCACCAAATCCACCATCACATCTGTCTATGTCTCAGCTTAGTGTAAGTTAGGTGAATACCAGTTTTACAGCATGTAGTAAATAATAACTTGTGGTTAATCTGGAAAATAAGAAAAGTGAAAAGTACACATAATGTCAGATTTATAAACTGACTATTTTGTATTTACTTGTCTGATTGCAATGCCACTATTTCCTTACATTTCCTTTATGACTTTATATTTTGATTTGTGCTACATGACTTGTAATTGAAAAACCACAATCAAATGATTATCAATAAACAGTACTGTCATTACTGTATATAGTGCTGCAAACCTGCAAGTTTTGTCTCCCATGTTTTTCACTGATGTAATAAAGACCAGGTCTGGACCTTTTTAGCGACTCGTCGTGCATAAACAGTACATACAACCTTGGTATTATTATCACATAGGAAAAAAAACCTTTCTCTGTTAAAACCACTGCTCTGTTCACTTCTTTTTTCAGATTCCCTCCGACTTGATTTTCCCATCCTAGCAACATGCAGTTTAGTGGTAGCCAAGGAGCTTCACCACTGTGCCAACTAGCCAGCACTGTTCTCAAGGATGGCTCTCACAGAATGTATCACAGCAAAAAGAGTTTGGTGAAAATCAAAAATTATACTGTCTGTGTGAGAGCGAGAACAAAAAGAGACGTATGTAATAATCATTACTCGTGCATTGATACTAGTTACAAGttcttttatttaaatgacaaaatactTGGTTGTTGCTGGGAATTTTTTTGTGAATCTGTCAACTGTGTAACTGTTCTATTCAGAGTTTCCCAATGGATTTCTTTCATAGACAGAAAATGTTATAGGTCATATTGTCCAGGCACTCAACAtggcatattattattattattaacaatttcTTGGGAAAACCACAAAGTAGGCTACTTAAAATTCACTCTGACGTCTAACTAAATAAGAGGTTTAGGTCTGTGGAAAAAGAAGGAGGGTCAAACTGGGttagatagatacagtagatagatactttattcatcccgagggaaattttagGGTTACCTATTGTGTTAAAGGGATTTACCATTTCTGTATATTTAAGGTAGCCTACTTCATTTTGGGGTCAAGCTATATTTTGGCAaaactgcaaaagaaaactttcATTTTAGTTACATTTGAATTTGGTTAATTCTGATTTAGTTCACAAAGTTACCCCTAGTAAAGTTTGCTTCAAAACAATCAACCATCTACATCTGTGTTACATTAAGGCATGGTTGATTTTTAGGCATAGGTTAGTGTCATGTAGATGATATGACCACAATTGAgtaaagttaaataaaatgaattattaATATAATTGTCAGTGGATTTTAGGCTTAGGATATCTAAATGACCACAAACAGCCCTGCATTAAGGCTCTGATAGAAAGTCATCCTTGGAGTATGCTACAGAATGCATGGCAGACAATGTGGTCAAACCTTAcacaaaactatatatatatatatgtctagaCAGGTCTGGCAAAGCTGCAACACCACCTTTACAATGTCAGACAATGTTTTCAAGGGATAATTTCATGAGTATACTTTTTAAGTAATTATATTAAAAGTTTAAGAACTAATTTAACTGAAAAGATTGAGTTATATGTTCTTCATAGGAACACATTGGTGTCTGTTTTGATGTGGACCCCATGTGTACATATccatattttttcatttgtgtGAGAACCAATTAGGTTTTTGAGGCCAATTTTTGACAAGTGAGGTCATTCTGGGGCCTGTTCAGGGAGACCCTCTCTTCTTTAAGAGGATAGGGAATACCTGTTGTCAATTGTAGGTCCTCACTTATATAGAAGTTcaagaacgtgtgtgtgtgtgtgttggttggaGAGGTATAGGGTGATTTCAAAAGGCAGTCTCACTTTAGTTACATTCAAATAAGGAAATATTATATCAtatcattttatattatatatttgtctAGTCTTTCATTTTTTGgatattttgtaaaaataagtCTTTGTTTCTCGAGCTGTCTGAGACAATGGTAGTTTATTAGAAATATTTAATTTCAAAAATGTATTCCGTATTATTTGTGTAATAagtgtttatcggtgttttaagccaaCAACGTCTCcttcaggcagcgctgcctggaaggcactaggagaaggcaatggttatggttatggttagggttaaaattagggttaggtgccttgaagtcaacggtcgcagtgctgcctggaaagagacgttgggggcttaaaacaccattgagcgtacTAACTGCTGTTTAAAACCTCCCCGACCCCAGCTCCTCAGACTGTGCACTGGCTTAGTTAACCAGGAGCTCCTGGTACTGCTCAGACCGAAGGAAACGACCGAAGGAGTCTTTCTCCATCAGGGCGAAGATCCTCTTCTGGGCCAGGTCAAAGGTTGTAGGGGAGAGATCAACCAGGTTCCTCAGGGTAACATCCTTGGTGAAGTGATCAATGTTCACCTCTCTGGGTCCCTCAGACTGGATGAAGTCTTCATAGATCTTCTTGGCCTTGGCGGCCATCTTAGCGGGGTTCTTGGTCTTCTTGAAGTCCTCGCAGGTCACCCAGAACTCAATGTTCTCATCACTGAACTCGGACTGCAGGAAGCTACGGAAAGCCGCCAGACCATCTGATGGAGAAAAGGGGGTGgggagttagagagagagaaagatgtatCGAC
>TU126920
cccactctataatttacaaagccctaacaattccagtaattcccccaagagcaagctttagcagtggctattgcgacagttgCGAGGAAAACTcgcttttaggaagaaacctcggcagacccagactcttggtaggcggtgtctgacggggccggttgggggttaacattttttcattattaaaataacaaatttggAGGACTTTTTGGCCTCCGCATCGGTATGTGTTCACTGAGTAGTCTGCGTGTTAGTTTTTCATCGCAGTCTTAAAGTCACAAGATGCTTCTAATGTACACACATAATGAATAGGTatcaaatgaagaaaaacaaagtgacaGTTGAAAGTCAGGAGTTTCCTCTTTTATAACAGTGAAACGATTCTGGGAAGAGTCCTTGCCATCTCCCTATTCAAAGAATCATGGAttccattgttgtttttaagAATAACTTAGACACAATTTGTTGTAAATAGTTgatatttacacacaaaaataaatacatcttcAGGAATTGTAtgcatatatatttttatgtggTCGACTCCAGAATGTACATGCAAGGCTACATCAAATAATGCATACTCAGCACTGTTAAAGCCCTTATTGAGTTTTCtttgagttttctttttctttctttgttgatTTGTATGACGCTTAAGGTTATGACACCAGACTGGCTAATCTGTGCCACAATAAACTCTTATTGATGctgtttaaaattaaaataaatctctcagattttttttttttttgatttcttGGTTGTTCCAATGAGTAATTGACATAATCAGTGAATACGTTTACAAGTTAGAATGTATGTCACTCCTGATCAATTTTGCTTTTAGTTTTTGATTAGTGCACAATACTTGCATTTTAGGGAACAATAAGGACTTGTAAAATGCTGAATATCTAGATAACAATATTCCTGTGTTGGTTAAGACATTATGCTTttgtttaatataaaaaagcatAAAAGACTAAATATTATCACACTTTATAACTGCTACATTCAACTAAATGTATACATTTAGGACACTTAAACATTGCACACCACCAAATCCACCATCACATCTGTCTATGTCTCAGCTTAGTGTAAGTTAGGTGAATACCAGTTTTACAGCATGTAGTAAATAATAACTTGTGGTTAATCTGGAAAATAAGAAAAGTGAAAAGTACACATAATGTCAGATTTATAAACTGACTATTTTGTATTTACTTGTCTGATTGCAATGCCACTATTTCCTTACATTTCCTTTATGACTTTATATTTTGATTTGTGCTACATGACTTGTAATTGAAAAACCACAATCAAATGATTATCAATAAACAGTACTGTCATTACTGTATATAGTGCTGCAAACCTGCAAGTTTTGTCTCCCATGTTTTTCACTGATGTAATAAAGACCAGGTCTGGACCTTTTTAGCGACTCGTCGTGCATAAACAGTACATACAACCTTGGTATTATTATCACATAGGAAAAAAAACCTTTCTCTGTTAAAACCACTGCTCTGTTCACTTCTTTTTTCAGATTCCCTCCGACTTGATTTTCCCATCCTAGCAACATGCAGTTTAGTGGTAGCCAAGGAGCTTCACCACTGTGCCAACTAGCCAGCACTGTTCTCAAGGATGGCTCTCACAGAATGTATCACAGCAAAAAGAGTTTGGTGAAAATCAAAAATTATACTGTCTGTGTGAGAGCGAGAACAAAAAGAGACGTATGTAATAATCATTACTCGTGCATTGATACTAGTTACAAGttcttttatttaaatgacaaaatactTGGTTGTTGCTGGGAATTTTTTTGTGAATCTGTCAACTGTGTAACTGTTCTATTCAGAGTTTCCCAATGGATTTCTTTCATAGACAGAAAATGTTATAGGTCATATTGTCCAGGCACTCAACAtggcatattattattattattaacaatttcTTGGGAAAACCACAAAGTAGGCTACTTAAAATTCACTCTGACGTCTAACTAAATAAGAGGTTTAGGTCTGTGGAAAAAGAAGGAGGGTCAAACTGGGttagatagatacagtagatagatactttattcatcccgagggaaattttagGGTTACCTATTGTGTTAAAGGGATTTACCATTTCTGTATATTTAAGGTAGCCTACTTCATTTTGGGGTCAAGCTATATTTTGGCAaaactgcaaaagaaaactttcATTTTAGTTACATTTGAATTTGGTTAATTCTGATTTAGTTCACAAAGTTACCCCTAGTAAAGTTTGCTTCAAAACAATCAACCATCTACATCTGTGTTACATTAAGGCATGGTTGATTTTTAGGCATAGGTTAGTGTCATGTAGATGATATGACCACAATTGAgtaaagttaaataaaatgaattattaATATAATTGTCAGTGGATTTTAGGCTTAGGATATCTAAATGACCACAAACAGCCCTGCATTAAGGCTCTGATAGAAAGTCATCCTTGGAGTATGCTACAGAATGCATGGCAGACAATGTGGTCAAACCTTAcacaaaactatatatatatatatgtctagaCAGGTCTGGCAAAGCTGCAACACCACCTTTACAATGTCAGACAATGTTTTCAAGGGATAATTTCATGAGTATACTTTTTAAGTAATTATATTAAAAGTTTAAGAACTAATTTAACTGAAAAGATTGAGTTATATGTTCTTCATAGGAACACATTGGTGTCTGTTTTGATGTGGACCCCATGTGTACATATccatattttttcatttgtgtGAGAACCAATTAGGTTTTTGAGGCCAATTTTTGACAAGTGAGGTCATTCTGGGGCCTGTTCAGGGAGACCCTCTCTTCTTTAAGAGGATAGGGAATACCTGTTGTCAATTGTAGGTCCTCACTTATATAGAAGTTcaagaacgtgtgtgtgtgtgtgttggttggaGAGGTATAGGGTGATTTCAAAAGGCAGTCTCACTTTAGTTACATTCAAATAAGGAAATATTATATCAtatcattttatattatatatttgtctAGTCTTTCATTTTTTGgatattttgtaaaaataagtCTTTGTTTCTCGAGCTGTCTGAGACAATGGTAGTTTATTAGAAATATTTAATTTCAAAAATGTATTCCGTATTATTTGTGTAATAagtgtttatcggtgttttaagccaaCAACGTCTCcttcaggcagcgctgcctggaaggcactaggagaaggcaatggttatggttatggttagggttaaaattagggttaggtgccttgaagtcaacggtcgcagtgctgcctggaaagagacgttgggggcttaaaacaccattgagcgtacTAACTGCTGTTTAAAACCTCCCCGACCCCAGCTCCTCAGACTGTGCACTGGCTTAGTTAACCAGGAGCTCCTGGTACTGCTCAGACCGAAGGAAACGACCGAAGGAGTCTTTCTCCATCAGGGCGAAGATCCTCTTCTGGGCCAGGTCAAAGGTTGTAGGGGAGAGATCAACCAGGTTCCTCAGGGTAACATCCTTGGTGAAGTGATCAATGTTCACCTCTCTGGGTCCCTCAGACTGGATGAAGTCTTCATAGATCTTCTTGGCCTTGGCGGCCATCTTAGCGGGGTTCTTGGTCTTCTTGAAGTCCTCGCAGGTCACCCAGAACTCAATGTTCTCATCACTGAACTCGGACTGCAGGAAGCTACGGAAAGCCGCCAGACCATAGCTGTTGTTCAGGACTCGGTCCAGACTCTCACGCCACTGAGCAGCCTCCTCCGGAGTAGGCTTCTGCTGCTTCTCCGGCTTCTTCTCAGTCTTCTCGGGATAGGGGATGATGAGATCAATGCCATTTTCCGGCTTCTGCAGTAAAACGCCCAATTTCGACTTGATCTCCTTCGCCCTTTCCCGGCAGGTTTGGGGTAAGGCAGCTAATCCTTTACACATTTTCCAATGGCTTCAGTTGCAGTATTCGAGAGTGAATTCAGTCTTCCTGTTAGCTCAATGTAAGTCTTAGAGTCCCT
>TU126921
cccactctataatttacaaagccctaacaattccagtaattcccccaagagcaagctttagcagtggctattgcgacagttgCGAGGAAAACTcgcttttaggaagaaacctcggcagacccagactcttggtaggcggtgtctgacggggccggttgggggttaacattttttcattattaaaataacaaatttggAGGACTTTTTGGCCTCCGCATCGGTATGTGTTCACTGAGTAGTCTGCGTGTTAGTTTTTCATCGCAGTCTTAAAGTCACAAGATGCTTCTAATGTACACACATAATGAATAGGTatcaaatgaagaaaaacaaagtgacaGTTGAAAGTCAGGAGTTTCCTCTTTTATAACAGTGAAACGATTCTGGGAAGAGTCCTTGCCATCTCCCTATTCAAAGAATCATGGAttccattgttgtttttaagAATAACTTAGACACAATTTGTTGTAAATAGTTgatatttacacacaaaaataaatacatcttcAGGAATTGTAtgcatatatatttttatgtggTCGACTCCAGAATGTACATGCAAGGCTACATCAAATAATGCATACTCAGCACTGTTAAAGCCCTTATTGAGTTTTCtttgatatattgatTT
Function
| symbol |
description |
|
rgs5
|
Predicted to enable GTPase activator activity and GTPase activity. Predicted to be involved in G protein-coupled receptor signaling pathway and regulation of G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Implicated in essential hypertension.
|
NR:
| description |
| PREDICTED: regulator of G-protein signaling 5 |
GO: NA
KEGG: NA
RNA
| RNA id |
representative |
length |
rna type |
GC content |
exon number |
start site |
end site |
| TU126919 |
False |
3748 |
TUCP |
0.37 |
3 |
8237370 |
8245821 |
| TU126920 |
True |
3994 |
TUCP |
0.38 |
6 |
8237370 |
8254575 |
| TU126921 |
False |
628 |
lncRNA |
0.38 |
2 |
8237370 |
8286436 |
Neighbor
| gene id |
symbol |
gene type |
direction |
distance |
location |
| rgs4 |
NA
|
coding |
upstream |
22870 |
8208453 ~ 8214500 (+) |
| LOC120565295 |
tsta3,LOC104953080
|
coding |
upstream |
363384 |
7868591 ~ 7873986 (+) |
| LOC120565646 |
LOC103354728,LOC102290039,LOC107394705
|
coding |
upstream |
369642 |
7862214 ~ 7867728 (+) |
| LOC120564954 |
foxc1,LOC104932399,LOC104963658
|
coding |
upstream |
631740 |
7603460 ~ 7605630 (+) |
| foxf2b |
foxf2,LOC102792585
|
coding |
upstream |
647071 |
7586141 ~ 7590299 (+) |
| LOC120564973 |
LOC103367494,LOC104965670,LOC104935957
|
coding |
downstream |
735081 |
9021517 ~ 9033680 (+) |
| LOC120564878 |
NA
|
coding |
downstream |
770905 |
9057341 ~ 9062036 (+) |
| LOC120566074 |
LOC104935955,LOC103367504
|
coding |
downstream |
780742 |
9067178 ~ 9070676 (+) |
| LOC120564889 |
rgs2,LOC103367537
|
coding |
downstream |
794423 |
9080859 ~ 9083857 (+) |
| LOC120566012 |
NA
|
coding |
downstream |
1120274 |
9406710 ~ 9505927 (+) |
| G94068 |
NA
|
non-coding |
upstream |
58887 |
8176269 ~ 8178483 (+) |
| G94064 |
NA
|
non-coding |
upstream |
76831 |
8159603 ~ 8160539 (+) |
| G94062 |
NA
|
non-coding |
upstream |
86500 |
8150462 ~ 8150870 (+) |
| G94060 |
NA
|
non-coding |
upstream |
133566 |
8103490 ~ 8103804 (+) |
| G94059 |
NA
|
non-coding |
upstream |
134007 |
8102993 ~ 8103363 (+) |
| G94151 |
NA
|
non-coding |
downstream |
328475 |
8614911 ~ 8615634 (+) |
| G94153 |
NA
|
non-coding |
downstream |
366620 |
8653056 ~ 8653424 (+) |
| G94167 |
NA
|
non-coding |
downstream |
713727 |
9000163 ~ 9000460 (+) |
| G94169 |
NA
|
non-coding |
downstream |
715020 |
9001456 ~ 9001706 (+) |
| G94192 |
uchl5
|
non-coding |
downstream |
803392 |
9089828 ~ 9096292 (+) |
| LOC120565614 |
NA
|
other |
upstream |
332123 |
7896145 ~ 7905247 (+) |
| LOC120565294 |
pycrl
|
other |
upstream |
347193 |
7878919 ~ 7890177 (+) |
| G93938 |
NA
|
other |
upstream |
886783 |
7349810 ~ 7350587 (+) |
| rhpn1 |
rhpn1
|
other |
upstream |
1855772 |
6354892 ~ 6381598 (+) |
| G93638 |
NA
|
other |
upstream |
2023353 |
6202085 ~ 6214017 (+) |
| G94199 |
LOC103367571,LOC102312400,LOC100710958,LOC101467655
|
other |
downstream |
860726 |
9147162 ~ 9168877 (+) |
| LOC120566011 |
NA
|
other |
downstream |
1098069 |
9384505 ~ 9543535 (+) |
| G94239 |
NA
|
other |
downstream |
1265860 |
9552296 ~ 9557568 (+) |
| G94281 |
NA
|
other |
downstream |
1531185 |
9817621 ~ 9879198 (+) |
| LOC120565620 |
NA
|
other |
downstream |
1557835 |
9844271 ~ 9846275 (+) |
Expression