G94266 (bcar3,LOC102779191,LOC102207586,LOC101480816)


Basic Information

Item Value
gene id G94266
gene name bcar3,LOC102779191,LOC102207586,LOC101480816
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 9691929 ~ 9693033 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU127173
CTGGTTGGCTGCCACAGCGATCCTTTGACCTGAGCTGGCTGCCTCGGCTCACGCCGTCGTCCCGGCCGTGTGTGCTGTCGTGcacggtgtgtgtgttgtcgtgtgtgtgtccgttGGTAATGTTGAGGCTGCGGCGCTTCTGATTCCGCCTCTCCTGCGCCATGAGCGCCTCTCGATGATGGCTGGACAACCCGTACTTTTCCTCCAGACAGCGCAGCGGCAGCCCCCTGTTAATTGGCTGGAAGATAATGGCTCCTACCACCTTAAATGCACAGATAGAAG

Function

symbol description
bcar3 Predicted to enable guanyl-nucleotide exchange factor activity and phosphotyrosine residue binding activity. Predicted to be involved in positive regulation of peptidyl-serine phosphorylation. Predicted to act upstream of or within small GTPase mediated signal transduction. Orthologous to human BCAR3 (BCAR3 adaptor protein, NSP family member).

NR:

description
PREDICTED: breast cancer anti-estrogen resistance protein 3 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU127173 True 282 lncRNA 0.59 2 9691929 9693033

Neighbor

gene id symbol gene type direction distance location
fnbp1l fnbp1l,LOC102783810 coding upstream 20141 9614795 ~ 9671788 (+)
LOC120566020 LOC103374322,LOC104940880,LOC103131468,LOC106964853 coding upstream 88354 9589156 ~ 9603575 (+)
depdc1a depdc1 coding upstream 104260 9575258 ~ 9587669 (+)
trnah-gug_12 NA coding upstream 119560 9572298 ~ 9572369 (+)
LOC120566012 NA coding upstream 186002 9406710 ~ 9505927 (+)
hps3 hps3 coding downstream 73043 9766076 ~ 9785140 (+)
LOC120565507 NA coding downstream 92759 9785792 ~ 9796989 (+)
LOC120565621 NA coding downstream 158092 9851125 ~ 9865455 (+)
fxr1 fxr1,LOC106531534 coding downstream 274321 9967354 ~ 9979742 (+)
sox2 sox2 coding downstream 419949 10112982 ~ 10115322 (+)
G94259 NA non-coding upstream 12192 9662132 ~ 9679737 (+)
G94238 NA non-coding upstream 140238 9547714 ~ 9551691 (+)
G94231 NA non-coding upstream 150870 9540537 ~ 9541059 (+)
LOC120566016 NA non-coding upstream 196572 9493981 ~ 9495357 (+)
G94232 NA non-coding upstream 205964 9484003 ~ 9485965 (+)
G94373 NA non-coding downstream 208162 9901195 ~ 9902122 (+)
LOC120565916 NA non-coding downstream 215874 9908907 ~ 9912100 (+)
G94400 NA non-coding downstream 288389 9981422 ~ 9983844 (+)
G94405 NA non-coding downstream 490161 10183194 ~ 10183408 (+)
LOC120565491 NA non-coding downstream 511107 10204140 ~ 10297258 (+)
G94239 NA other upstream 134361 9552296 ~ 9557568 (+)
LOC120566011 NA other upstream 148394 9384505 ~ 9543535 (+)
G94199 LOC103367571,LOC102312400,LOC100710958,LOC101467655 other upstream 523052 9147162 ~ 9168877 (+)
G94073 rgs5,LOC107393027,LOC104951458,LOC100708109,LOC105932873 other upstream 1405493 8237370 ~ 8286436 (+)
LOC120565614 NA other upstream 1786682 7896145 ~ 7905247 (+)
G94281 NA other downstream 124588 9817621 ~ 9879198 (+)
LOC120565620 NA other downstream 151238 9844271 ~ 9846275 (+)
G94376 NA other downstream 209252 9902285 ~ 9903189 (+)
ttc14 ttc14 other downstream 240580 9933613 ~ 9948237 (+)
LOC120565490 NA other downstream 292686 9985719 ~ 10159881 (+)

Expression


Co-expression Network