G94677


Basic Information

Item Value
gene id G94677
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 11104221 ~ 11104522 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU127711
TTTTCATGAGGTTGTCAGGTGGGACGTCCCTCCTGCCAAGCGAGTAGGGAGCCCACTGGTTGCTTCCTGACAGCCCCTCCTGGTCATTATCCAGCATGGCAGCCTGCTGGGAGGGGGtctggaagagagacagaaaaagagacaggGAAACAGTGACCCTTTACTGGAAATTAACTTTTCACTTAAAGAGGTatcatctaaacacactgcacatatgacacagagctggactgAAATTGGCAAAGTATCTCGTTAAGTAATTCATTCAAGTATCAACCTTTGCCTGCCTGAGGTTGTTTCAG

Function

GO:

id name namespace
GO:0021591 ventricular system development biological_process
GO:0021592 fourth ventricle development biological_process
GO:0007420 brain development biological_process
GO:0030902 hindbrain development biological_process
GO:0060322 head development biological_process
GO:0005102 signaling receptor binding molecular_function
GO:0005515 protein binding molecular_function
GO:0005179 hormone activity molecular_function
GO:0030545 receptor regulator activity molecular_function
GO:0048018 receptor ligand activity molecular_function
GO:0098772 molecular function regulator molecular_function

KEGG:

id description
ko04080 Neuroactive ligand-receptor interaction

RNA

RNA id representative length rna type GC content exon number start site end site
TU127711 True 302 lncRNA 0.48 1 11104221 11104522

Neighbor

gene id symbol gene type direction distance location
LOC120566056 LOC103374891,LOC100702684,LOC101467020,LOC102305063 coding upstream 344292 10748929 ~ 10759929 (+)
LOC120566058 LOC103374891,LOC102305063,LOC100702684,LOC101467020 coding upstream 370260 10722902 ~ 10733961 (+)
tm4sf18 LOC100702951,LOC102305373,LOC101466751,LOC102228636,LOC103155263,LOC104936000,LOC103374892,LOC105936905 coding upstream 389339 10696023 ~ 10714882 (+)
LOC120565966 LOC101466472,LOC102777579,LOC108238401,LOC101066382,LOC106527066 coding upstream 413135 10681539 ~ 10691086 (+)
slc25a24 slc25a24,LOC104951356,LOC104935995 coding upstream 435335 10653639 ~ 10668886 (+)
LOC120565506 NA coding downstream 619 11105141 ~ 11107198 (+)
ccdc17 NA coding downstream 118000 11222522 ~ 11237901 (+)
LOC120565497 LOC103370597 coding downstream 143912 11248434 ~ 11304093 (+)
trnam-cau_8 NA coding downstream 144053 11248575 ~ 11248647 (+)
LOC120566075 LOC101470345,LOC102300495,LOC102205443,LOC103370586 coding downstream 207216 11311738 ~ 11356871 (+)
G94676 NA non-coding upstream 1406 11102476 ~ 11102815 (+)
G94674 NA non-coding upstream 2652 11101328 ~ 11101569 (+)
G94613 NA non-coding upstream 107020 10996477 ~ 10997201 (+)
G94609 NA non-coding upstream 127156 10963548 ~ 10977065 (+)
G94604 NA non-coding upstream 155399 10948503 ~ 10948822 (+)
G94680 lrrc7,LOC103129487,LOC106524106 non-coding downstream 9876 11114398 ~ 11114677 (+)
G94681 NA non-coding downstream 11182 11115704 ~ 11116031 (+)
G94682 NA non-coding downstream 12377 11116899 ~ 11117140 (+)
G94683 lrrc7 non-coding downstream 12809 11117331 ~ 11117684 (+)
G94684 lrrc7 non-coding downstream 13756 11118278 ~ 11118503 (+)
si:ch211-162e15.3 LOC103376230,LOC100712485,LOC108238459,LOC102795316,LOC102207055 other upstream 155905 10946932 ~ 10948316 (+)
G94598 NA other upstream 162977 10916925 ~ 10941244 (+)
atp11b atp11b other upstream 689395 10363462 ~ 10414826 (+)
LOC120565490 NA other upstream 944340 9985719 ~ 10159881 (+)
ttc14 ttc14 other upstream 1155984 9933613 ~ 9948237 (+)
LOC120565923 LOC103370579,LOC100695501,LOC102794561,LOC101470646,LOC102226407,LOC102291616 other downstream 255168 11359690 ~ 11458146 (+)
znhit6 znhit6,LOC102790327 other downstream 684613 11789135 ~ 11821882 (+)
lrp8 LOC103355569 other downstream 1057116 12161638 ~ 12443080 (+)
ror1 ror1 other downstream 1638283 12742805 ~ 12865842 (+)
raver2 raver2 other downstream 1901046 13005568 ~ 13100445 (+)

Expression


Co-expression Network