LOC120564959 (LOC104946909,LOC103360792,LOC102294988,LOC101486556,LOC102197099)


Basic Information

Item Value
gene id LOC120564959
gene name LOC104946909,LOC103360792,LOC102294988,LOC101486556,LOC102197099
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 15523929 ~ 15632812 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU129122
CTCACCCGTCTCGGACCCTGAATCTGGCTGCCATGTCGGTGCGGAGCCCCCACAGGACGCTGGCCTCCCCGGGGCGGGAGGTTGGCGACAGAGAACTCAGCAAGGAGAGCGACGGGGTGGAGTGCCTACGTATGGGCACGTAACAACCAGCACAACCTGCCCCGCCTGACAGACACGAGTGCTGGATGTGGAGAGACGGAGGCAGGGCAGGCCTTTACCAATAAAGTCTGTAAAATCACTACTGTCCCTTTACACTGGAGACACCCACTTGGGAGAACTGTTTTATCTTATATTTTAACCAAGAGAATAGTTTCAGCCCCTCTTCGGGAGCCTGATTGGCCTTTGTGTCCCGTCCTGCTTTGTTGTAGCTTCAGTTCAGAGTCCCAGACAAAGACTGCTGCATTTTACCTGGGAAGAAGAGTGGAGCCAAGGCAGGATACTGGAACAAGAACAAAAGCTATAACCCAGCAGCTGTCCCCTTAGCTCTCCTGCAGCACAGGAAGTGAGAGTTTTGACATTTCCTGTTCGTATGGAATACTAGCCCTGGGTAGTTTGCACAAACCGTGCCGGTCACCGTGGCTGAACAGAAAAGCAAGTTTTCAGAGGAGTTACATCGGCATGTTAAAACAGCAGTGTGGGCGTGGCTCTCTACAGGAAGACATCAGTGCTATACGGTGTTGTGTTGAGCAGGAAAGTCCCTGCACTCTGTTATTGTGTCGCACTGATACTGCCAACATTAAATGTTCATGCTGTCGGTTTTCTCAGCCTCTGTGATGTGCAAACTTCTATAAAGATATTTATTCTTCAAACATGTCTGTCAAGACAAAGTACTGTAACATTGGACATTTTATGTTCTGAAGCCTAAAAATCAAGTATGCTTTACAAGTATACATCTGCCactccaatgtttttgtcaaagaaaataacTTTGTTTCTCATTCTAAGCCAAAAGACTGTCGGAAGTTCAGGGtgttttaaatggaaaatgccaataaagaaaatatgg
>XM_039810232.1
CCGACCGGGCACGCAGGCACGCAGCGCTGCATGTTGCAGAGTTTGAAGtctaaactaactaactaatcaGCGGCAATAAAATGGAAAAGAACCATAACTGCAGCAGCATTACCTGATTGACACCTTTAACAGGTCCAGTGGAATTTCCCTGCAAAGAAAAGACGGCGAGAGAAGACGGCCGCTGCGcTGCTGCAACAAATAACCAGCACCAATGTCTCGGCTTGAGGGTCGTCGGGATTCTCTGCCTGCGGTCCAACAGGCGGTGCGGCGGCGTTTCTCAGggccgctgctgctgcctccTCTGTGGAGGAGGCACTCTTGCCAGGAGCGCCCATGTGACAGCCGGCGCCCGTCTATAACACACGGTCTGCCTCTGGACCGTCTGGAAGTTCTCTACAGACAAGCACTGGCCAGTCATGATGAGCACGGtttTGATGTGGAGAATGGCCTGTCAGTGGGTCGCAGTCCACTGGACTCTCAGACTAGCCCAAGTTCTGGTCTGGTCCTTCAGGCCAACTTCCCACACAGTCAGCGCCGCGAGTCCTTCCTCTACCGCTCCGACTCAGACTTCGACCTTTCGCCCAAAACCATGTCCCGCAACTCGTCCACTGCCAGCGACCTGGAGGAGGGATTGAAGCATTGGGAAGTCAATTGGCTACCTCGACATGGAGAAGACATGATAGTGACTCCATTTGCACAGGTTCTTGCCAGTCTACGAACAGTGAGAAGTAACTTTGCAGTTCTGACACATCTGCAAGATCGTGTAACAAACAAGCGGCCGACATGCAGCAACCAGCCACCCATGTGTAAGCCATGTCTTACAGAGGAGCCCTACCAGAAGCTGGCGGTGGAGACACTGGAAGAGCTGGACTGGTGTCTGGACCAACTGGAGACGCTGCAGACGAGACACTCAGTCGGCGAGATGGCATCAAATAAGTTTAAGAGGATGCTAAACCGTGAGCTGACGCAGCTATCAGTGACAAGCCGCTCAGGGAATCAGGTGTCAGAGTTCATCTCCAACACTTTCCTAGAGAAACAGCATGATGTGGAGATCCTGTCTCCACCTTctaaggaggagaagaagaagaggccGATGTCACAGATCAGTGGtgtgaaaaaggtgacacagaGCCCCAGCTTAGCACCCACCTGCATCCCCCGCTTTGGAGTGAGCACACCACACGAGAGCCTGTTGGCCCAgGAGGTCGAGGAGATTAATCGTTGGGGTCTGGATGTATTTAAGATAGCAGAATTTTCTGGAAACCGCCCTTTGACGGTGATCATGTACTCCATCTTCCAGGAGAGAGACCTTCTGAAAACCTTTAAGATCCCAAATGACACCTTTATCACCTTAATGATGACCCTGGAGGACCACTACCATGCAGATGTAGCTTATCACAACAACATTCATGCAGCTGATGTGGTGCAGTCCACCCACGTCCTCCTGTCCACCCCTGCTTTAGAGGCGGTGTTCACAGACCTGGAGATCATGGCTGTTCTGTTTGCTAGTGCCATCCATGATGTCGACCACCCAGGAGTCACCAACCAGTTCCTGATAAACACCAGTTCAGAACTGGCACTGATGTACAACGATGCCTCGGTGCTGGAGAATCACCACCTCGCTGTGGGCTTCAAACTGCTGCAAGAAGACAACTGTGACATCTTCCAAAACCTCAGCAAGAAACAGAAAGACTCCCTCCGAAAGATGGTGATCGACATGGTGCTTGCCACTGATATGTCCAAACACATGAACTTCTTGGCGGATATGAAAACAATGGTGGAGACCAAGAAGGTGACCAGTCTGGGAGTCCTGCTGCTCGACAACTACTCTGATCGCATCCAGGTTCTGCAGAACATGGTACACTGTGCCGACCTGAGCAACCCAACCAAACCGCTGGAGATTTACCGCCAGTGGACGGACCGCATCATGGTGGAGTTCTTCACCCAGGGAGACCGAGAGCGGGACAAAGGCATGGAGATCAGTCCCATGTGTGACAAACACAACGCCTCTATAGAGAAGAACCAGGTGGGCTTTATCGACTACATTGTCCACCCTCTGTGGGAGACATGGGCGGACTTGGTGCATCCTGACGCCCAAGACATCCTGGACACGCTGGAGGACAACAGGGAGTGGTACCAGAGCATGATCCCACGCAGCCCATCGCCATCCAGCCCGGAGGAGCACCATGTGGAGGTGATACCAGGGGGAGGAGCTGTGGGAGCAGGAGGGGCCCTGCcttcaggaggaggaggaggaggagggggggacaAGTTCCAGTTTGAACTCActctggaggaggaagaggaggatgagggggagggggagtcTGACCTGGAGAGCCCCCTAGAGGAGGAGTCCCAGTTGGGTGGGAAGCGGCACCAGgactccccctccccctctttgTCCCCAGACCCCCGCAGCAGGTACCGCCCCCCCTCGCCTCACCCGTCTCGGACCCTGAATCTGGCTGCCATGTCGGTGCGGAGCCCCCACAGGACGCTGGCCTCCCCGGGGCGGGAGGTTGGCGACAGAGAACTCAGCAAGGAGAGCGACGGGGTGGAGTGCCTACGTATGGGCACGTAACAACCAGCACAACCTGCCCCGCCTGACAGACACGAGTGCTGGATGTGGAGAGACGGAGGCAGGGCAGGCCTTTACCAATAAAGTCTGTAAAATCACTACTGTCCCTTTACACTGGAGACACCCACTTGGGAGAACTGTTTTATCTTATATTTTAACCAAGAGAATAGTTTCAGCCCCTCTTCGGGAGCCTGATTGGCCTTTGTGTCCCGTCCTGCTTTGTTGTAGCTTCAGTTCAGAGTCCCAGACAAAGACTGCTGCATTTTACCTGGGAAGAAGAGTGGAGCCAAGGCAGGATACTGGAACAAGAACAAAAGGTAAAGGAAATGTCTTCCTCCAATAACTGTGTGTGACATTCAGATGTGAGAATGAGAACCCCGGTGGTCTGACAGGGTCTTGGAAATTATTTTGCACCATAGTTTTAATTTAGGATAAGAAATTACTGAGTCCGGTTGGAATAAGTATTAGTATGATTTCTTTGTTTGAGAATGATGTGAGAGATGAATAATTTTACCAAATACAGAATGTAGATGACATGATCGATGGACCTAAACCTCAGGGTATGAAGAGAAACATAAATCTAATGTAGCACGGACGTAGTGGGCTCCCCTGACCTGACCCTCGACCCCAAACTCTCTTTCCTGTTTGATTTACCTCCAAACCAGAGACATCTGAGACTTTAACCTGTGTGTCTCTACATTTAATTAAAACCCTTTAATATAAAATTTGGCAACTGAAGCAAtcaaataatatatatgtaaaacAGCTTGTAGCACCACAAAGATTAAACACTGAAGAAGACTGTACCCCAGTCTCACCTGttgaaaatacaaaagacacCACCTGTATAATTAGTTTgggctttatttttttacctgagATTATTTTAAATGGGGTCATTGTTTTAGGGTTCTGTACATTTGCTTGTcttgtctctgtttttgtgcttgaaaagcatttttttatcAGGGTGCCTCCAGTCCGCAGTAGCACTTTACCGTCTCTGCTCTTCAGCTCTTCTATTCAGTCACACAAAGGGCTTCGTCCACTGTAGGCCTACTGATCACACAGACAGAACAGTACGGGCTGTTTGACCCAAGGTAccagaaagcagagcaggaaACTCACTCGTTGGTTGATtcagaatgaaagaaagaaaaaaacttagTTGGCCAACAACAAAATTCACAACCTTAGGTTGGTTAGTCAGATAATATTGGAATTATAAGACTCCTGTTTTGATCCCGTTTAAACTATTTTGCACTTTAGTTTCTTGAGGTTCAAGttcaatttattttaaacagtaaaatatttttaaaagtttaTGGCACAAATAGGATGTGGAAAAGATTTATGTGCAAACTATGTATTATTTTCTATGAGTATCTTATAATTCCAAATAAGTCACCATGGTGTTGTGTCCCTGCCCTGCCGACAGGAGCTGACGTAGAGATCAGAGGTTGCTGACAGAAATAAATCAGATCAACCTAAACAGATTGTGTTCCATCAGGTTATCCGTCTTATTTGATAGATAGTGCTCGACTGGGATAACTGTGTGCCATAAGtgttgaaaacacacaaacacctgccagcctacaatgctgtacatttttaCACTAGAGATTTTAACCTGATGATTGTATCGAAGTCACTGACTTTATAGTGTTAGTTTTTATGAATATGTGTTACCAGTATTTAAAGCAGACAGTTTATTAGATTTTGTGCAGCTCATTATCAGTCTGTTCAGCCCTTTCCTATTCAGATAGCTGGGACGTAAGAATGTGTGTAGTTTCAGGAGTCCTCGTTCAGTCTAGAGCAGTGTTTGTCGCCGTCACTGAGGTAGAAAGACCAGGAAGCAAACAAGCACTACACAAATATGATGCACTTCTGGTCAGGCAGTCGTAGAAAACACCAGTCTAACAGTATTTCATTAACTCAGCTAGCCTTACATGTGATATGGTATGGATGTGGTTGGAGCCTAGTGTTAAAGGACCATTATGCTGTTTTTAACATGCTGAGCCTCAGAGCATTGTTTGCTTCGCTGTTCTTGAAAAGCAAAATTGCTCCTTTccaggcttttaaaaaaaaaaaaaataaataaaagatgtcaaaGAATCAGAATACATATAGGAAACTTTACATTTCTCATGACAGcagctttattctatttttgtCCTCATACATATTCTTAGTGTATGAGCTGTGAAAATAATCAAATGGCAAAATAAGCTACAAACATCTATAAGTAAAACATTATGTAAAGTTTTTGTTTCGCTGGTTGCACACTTTAACTTCTTGTTTCAAAATCCCTCAAAACTCCAGGGTGAAAATGCCATGTAAACCTCAGTAGCGGAGCATTTGGATCAAATGTTCTGGTTCACAGACCTTCCCTCTACCTCCATCAACAGGCTAAAGTTTATACTTACACACAAGAAATGTCAATCTAATTGGCAGATTGCCCTGAAAACCCTTATGGCCTTTTCTTTGGCATCACCTCGACAAACCTTTGTTTTACATGAAACCCTTTCATATTGTGTTGTAATGAAGATTGCATCATACAGTACCTGGGATTTAATCCGAAAATTTGCTCTGTGGTCATGTAATCATTAAGCTTCCTCTTCCTATCCAAGTTTTGGGTCTTGGTACTAAATGGCTcgtaatatttaaaatgtgtttgcaGTATAAACCTCTAGTCCACTGTAGTCACTGGAGCTTTTAATTCAGACTGCTGGTATGCACTTAAAGTACCTTCCTAGCGttgtttaaaaacacatttcctcaaGTTAGTTAAACTGTTGAGGATGAAGGAGCTCAGACAGACAATAGTATGCTGCGGTCAAtcaaaaatgaagaaaattgTCTTTTAAGATTTGTTTGAAACATGTTTTGACAAAGTATGTTCTTGATTAAGTATCAAAGAAAGTAATGGCATTTTaatctaaataaaatgttgtgcTTCCCTCTATGTGACAGCTATAACCCAGCAGCTGTCCCCTTAGCTCTCCTGCAGCACAGGAAGTGAGAGTTTTGACATTTCCTGTTCGTATGGAATACTAGCCCTGGGTAGTTTGCACAAACCGTGCCGGTCACCGTGGCTGAACAGAAAAGCAAGGTACAACAGAAAGTCTATAATTTTAAGCTCTTATTATACAATTCCTCTATTTTGAAGGAAGAAAATGCATCACTTtactagaagaaaaaaaaaaaagccaaacataCAAGTTCAGCAGGGCATTTTCATCATGTGGGATTACTGTGGATTTGAAACATTTAACAATTGATTTCAGTTTTCAGAGGAGTTACATCGGCATGTTAAAACAGCAGTGTGGGCGTGGCTCTCTACAGGAAGACATCAGTGCTATACGGTGTTGTGTTGAGCAGGAAAGTCCCTGCACTCTGTTATTGTGTCGCACTGATACTGCCAACATTAAATGTTCATGCTGTCGGTTTTCTCAGCCTCTGTGATGTGCAAACTTCTATAAAGATATTTATTCTTCAAACATGTCTGTCAAGACAAAGTACTGTAACATTGGACATTTTATGTTCTGAAGCCTAAAAATCAAGTATGCTTTACAAGTATACATCTGCCactccaatgtttttgtcaaagaaaataacTTTGTTTCTCATTCTAAGCCAAAAGACTGTCGGAAGTTCAGGGtgttttaaatggaaaatgccaataaagaaaatatggAAATTAA

Function

NR:

description
PREDICTED: cAMP-specific 3',5'-cyclic phosphodiesterase 4D-like isoform X1

GO: NA

KEGG:

id description
K01120 cpdP; 3',5'-cyclic-nucleotide phosphodiesterase

RNA

RNA id representative length rna type GC content exon number start site end site
TU129122 False 1006 lncRNA 0.47 3 15628969 15632805
XM_039810232.1 True 6285 mRNA 0.45 19 15523929 15632812

Neighbor

gene id symbol gene type direction distance location
LOC120564879 NA coding upstream 1524 15513151 ~ 15522405 (+)
LOC120565844 NA coding upstream 11654 15506857 ~ 15512275 (+)
mpv17l2 NA coding upstream 18708 15498026 ~ 15505221 (+)
LOC120566177 jund,LOC104930914,LOC103360786,LOC101484003 coding upstream 51166 15470647 ~ 15472763 (+)
lsm4 lsm4,LOC106613629 coding upstream 141150 15379515 ~ 15382779 (+)
LOC120564991 NA coding downstream 87377 15720189 ~ 15723206 (+)
gamt gamt,LOC102782137 coding downstream 138481 15771293 ~ 15775561 (+)
LOC120564897 NA coding downstream 255764 15888576 ~ 15896422 (+)
LOC120565334 LOC104959369 coding downstream 357738 15990550 ~ 15994166 (+)
tmem38a tmem38a coding downstream 389765 16022577 ~ 16031978 (+)
G95710 NA non-coding upstream 45772 15474594 ~ 15478157 (+)
G95681 NA non-coding upstream 134787 15387998 ~ 15389142 (+)
G95640 NA non-coding upstream 226736 15296284 ~ 15297193 (+)
LOC120565370 NA non-coding upstream 255744 15222133 ~ 15268185 (+)
G95496 crb1,LOC102787887,LOC102294192,LOC103365562 non-coding upstream 591848 14930512 ~ 14932081 (+)
G95729 NA non-coding downstream 101 15632913 ~ 15633568 (+)
G95731 ifi30 non-coding downstream 1686 15634498 ~ 15635947 (+)
G95735 NA non-coding downstream 6940 15639752 ~ 15646044 (+)
LOC120565654 NA non-coding downstream 43598 15676410 ~ 15681761 (+)
G95799 LOC103355525,LOC105938313,LOC101465035,LOC103143843,LOC106944932,LOC103463346,LOC106922741,LOC102200744 non-coding downstream 103140 15735952 ~ 15738435 (+)
dennd1b NA other upstream 600084 14810368 ~ 14923845 (+)
LOC120565380 NA other upstream 819576 14689382 ~ 14704353 (+)
G95460 NA other upstream 902516 14619358 ~ 14621413 (+)
LOC120564965 LOC102299696 other upstream 2124185 13390823 ~ 13399744 (+)
LOC120564964 LOC102797871,LOC101481459,LOC102301033,LOC106675533,LOC102797273,LOC102300313,LOC102200286 other upstream 2141182 13379398 ~ 13382747 (+)
kcnn1b LOC104945110,LOC103355562 other downstream 657011 16289823 ~ 16301000 (+)
kdm4b kdm4b,LOC104945107,LOC108234360,LOC108412081 other downstream 687682 16320494 ~ 16376449 (+)
nppc nppc,LOC104932751,LOC103372810 other downstream 2222819 17855631 ~ 17859411 (+)
nmur1a LOC103368681,LOC104952433 other downstream 3013891 18646703 ~ 18665113 (+)
G96418 tsc22d2 other downstream 3149788 18782600 ~ 18785636 (+)

Expression


Co-expression Network