G95804


Basic Information

Item Value
gene id G95804
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 15748410 ~ 15752090 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU129215
CCCACTCACCCTGTGCCCCGTAAGGCTGTTGCCAGCCCTGGGCAGGCTGTGCTGTCCAACCATTAGCTGCACTCAAGATGCCCCTTGTTGCCCACTGGCCAGGGCCAAGCTGGCCAGGAGCTTTGCTGTCACGAGGTTCAGCCTTCTTCACTTCCACCTTTTTTGCCCATGATGTCGTGAAAATGCATGTTGACAGCCTGGTCCACTGATTGTTCGGCCTCGAAAGTAATAAATCCAAAACCTAGCCAACGACCAAGAGTGAATCAAGGTAGCAGGGGGGTTGTGACAACACAAGATGAAGAACAGTATTGGGCTTCAGCAGAGTGAGGATCCGTCAAGACTGAGCAAGAGGCTCCTGGGGTTCGGATGATGTCGCAGACTTGCAGAACAACACATATCCAAGACTAAAGCCTGGGGGATTGAAGGAAACTTCTATTTACTGTgcagtgaaatattt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU129215 True 457 lncRNA 0.51 2 15748410 15752090

Neighbor

gene id symbol gene type direction distance location
LOC120564991 NA coding upstream 25204 15720189 ~ 15723206 (+)
LOC120564879 NA coding upstream 226005 15513151 ~ 15522405 (+)
LOC120565844 NA coding upstream 236135 15506857 ~ 15512275 (+)
mpv17l2 NA coding upstream 243189 15498026 ~ 15505221 (+)
LOC120566177 jund,LOC104930914,LOC103360786,LOC101484003 coding upstream 275647 15470647 ~ 15472763 (+)
gamt gamt,LOC102782137 coding downstream 19203 15771293 ~ 15775561 (+)
LOC120564897 NA coding downstream 136486 15888576 ~ 15896422 (+)
LOC120565334 LOC104959369 coding downstream 238460 15990550 ~ 15994166 (+)
tmem38a tmem38a coding downstream 270487 16022577 ~ 16031978 (+)
LOC120565290 comp coding downstream 282622 16034712 ~ 16047921 (+)
G95799 LOC103355525,LOC105938313,LOC101465035,LOC103143843,LOC106944932,LOC103463346,LOC106922741,LOC102200744 non-coding upstream 9975 15735952 ~ 15738435 (+)
LOC120565654 NA non-coding upstream 66649 15676410 ~ 15681761 (+)
G95735 NA non-coding upstream 102366 15639752 ~ 15646044 (+)
G95731 ifi30 non-coding upstream 112463 15634498 ~ 15635947 (+)
G95729 NA non-coding upstream 114842 15632913 ~ 15633568 (+)
G95806 NA non-coding downstream 14673 15766763 ~ 15767010 (+)
G95814 ndufs7 non-coding downstream 27775 15779865 ~ 15785647 (+)
G95830 NA non-coding downstream 62448 15814538 ~ 15821366 (+)
G95844 NA non-coding downstream 143587 15895677 ~ 15896005 (+)
G95853 apba3,LOC104946396,LOC105938289,LOC107096970,LOC103395862,LOC107392810,LOC103143878 non-coding downstream 178938 15931028 ~ 15934580 (+)
LOC120564959 LOC104946909,LOC103360792,LOC102294988,LOC101486556,LOC102197099 other upstream 115598 15523929 ~ 15632812 (+)
dennd1b NA other upstream 824565 14810368 ~ 14923845 (+)
LOC120565380 NA other upstream 1044057 14689382 ~ 14704353 (+)
G95460 NA other upstream 1126997 14619358 ~ 14621413 (+)
LOC120564965 LOC102299696 other upstream 2348666 13390823 ~ 13399744 (+)
kcnn1b LOC104945110,LOC103355562 other downstream 537733 16289823 ~ 16301000 (+)
kdm4b kdm4b,LOC104945107,LOC108234360,LOC108412081 other downstream 568404 16320494 ~ 16376449 (+)
nppc nppc,LOC104932751,LOC103372810 other downstream 2103541 17855631 ~ 17859411 (+)
nmur1a LOC103368681,LOC104952433 other downstream 2894613 18646703 ~ 18665113 (+)
G96418 tsc22d2 other downstream 3030510 18782600 ~ 18785636 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) G420940 NA non-coding NC_048569.1 CM023223.2 58870375 ~ 58871526 (-)
striped catfish (Pangasianodon hypophthalmus) G184712 NA non-coding NC_047605.1 CM018551.1 19684747 ~ 19687470 (-)
bowfin (Amia calva) G156048 NA non-coding CM030142.1 CM030142.1 15417978 ~ 15423850 (-)
mexican tetra (Astyanax mexicanus) G43248 dazap1 non-coding NC_035901.1 CM008304.1 17038571 ~ 17047109 (+)
mexican tetra (Astyanax mexicanus) G161334 NA non-coding NC_035914.1 CM008317.1 28592165 ~ 28592552 (-)