G95853 (apba3,LOC104946396,LOC105938289,LOC107096970,LOC103395862,LOC107392810,LOC103143878)


Basic Information

Item Value
gene id G95853
gene name apba3,LOC104946396,LOC105938289,LOC107096970,LOC103395862,LOC107392810,LOC103143878
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 15931028 ~ 15934580 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU129289
TGTCATGACATTTGCAATTATTACATAGACATATAAGAACtgtgctattattattattattattagataagCTGCAAAGACAACACATTTTAAGAGCTTTTAAAATTGAAATATACGTAGATCTAACTCGCATGTACTTAGGtatgtcatttgttttaaaatgaaaaaagcaaCTTTGCATCGGAAACTTATTCAGCGACCATTGACGCTCAATAAATAACATCAAGAAGATATCTTACAGATCATTTTAATGAACATCCAAAACAGCAAATTCTTAAAAATATAAGCATCTCTATGAAATAAGGCAGTTACCTTTTATTGTGCATGATATCTGCTTCCTGTCAGGCACAGTCAAGGAAGCATTGTATGAATGAACTAGAGCGCTCTGAAGCGTTTGACAGACACTTGATGATATGCACGTGCATGTTAGGGACTGGAAGTATATGACATTGAAATACACAGACTATTTGTCCTGATTCAATAAGGTTTCCCCTGCAAGCACATTCAGCTCAGGCACACATGGCAACCAGGCTGGAAGACCAAAAACTCTAGAGTACAGTAAACTCAACACCATTGACCAGAACGTAAAAGTTAGTGAAGTCAAAATATATTCCGTATATGAATTATTGAATCTCAGCTACTGCCTGCATTGTTAAATATCTGATAAATATAAGTGGAGAGTTACCATCTAACCCTGTCACTTTAATATATGCTTCCACACAATATTACAATGTACTTTacatcttaaaaataaatggcTAGACTATTTTGTTGTATTCAGTGTTTTGACAACAGCGTATGATAGGCTGTATGATCAATTGCATAATATTTTCTTAGTTTGGCAAAAGTTCATGTTACTTTAACACTGtgcagtttttttgtctttgatgCAGCAGGAAGTGCTCAAAGAAACACTGGCTGCTCTTGTCCTGTTAAGAGTCGATATGTTGAGGCTGGCATGGTCTTCAAGTGAATCTGCCCAGAGGGAGAAAAATCAAACTTTTAACTGCGAGAACATGTCATAATAAACAGCTAACTTTGAGTGGAATACATATGACTGTAtttatgatgaaataaaaacatagtgTGAATTCATCCCTTCTCACCTCTCCGACAGCATTGGTCAGGATCTGGATGATCTTGTCGTGCGGTGTGGCGACGACACTCTGCCCATTGATTTCAATAATGCGGTGTCCAACACGAATGCCTCCTCTCTCTGCTATGCCGCCCCGCATCAGACTGCAGATCtgcaacagaaagaaagaggaaacttTTACGTGGTGATGGGCAGACCCACCAGACTGGTGCTGTTGACGGACATGATGCGGTCCCCGATGCTGAGCTCGCCGCAGCGCTCAGCAGGGCCTCCGTGGAGGAGGTTGGCCACCACCACAGTGGGCAGGATGGAGCCCCAGCCTGACTCCACCACCGCCAGACCCAAGATCTCTCCAGCGGCCTTGGTGATGGCGACctaaaccacagacacaGTCTCGGATGTTCTGAGAGTCAGAGAAGTGGGCCAGGTCTCCGTTGTAGAGCTCCTGACTTTCCAGGTAGTCACTGTACTCGCCAGGCCTCAGATCGCTGGCCTTGATGCCGCTGGCCTGAAGAAACTGCTGGTACGCCACTCCGAACGCCTGACCGATAGCCTGGGCTATGACCTGAGCCTGGATGGAC

Function

symbol description
apba3 Enables enzyme binding activity and enzyme inhibitor activity. Involved in negative regulation of catalytic activity. Located in perinuclear region of cytoplasm.

NR:

description
PREDICTED: amyloid beta A4 precursor protein-binding family A member 3-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU129289 True 1677 lncRNA 0.43 3 15931028 15934580

Neighbor

gene id symbol gene type direction distance location
LOC120564897 NA coding upstream 34606 15888576 ~ 15896422 (+)
gamt gamt,LOC102782137 coding upstream 155467 15771293 ~ 15775561 (+)
LOC120564991 NA coding upstream 207822 15720189 ~ 15723206 (+)
LOC120564879 NA coding upstream 408623 15513151 ~ 15522405 (+)
LOC120565844 NA coding upstream 418753 15506857 ~ 15512275 (+)
LOC120565334 LOC104959369 coding downstream 55970 15990550 ~ 15994166 (+)
tmem38a tmem38a coding downstream 87997 16022577 ~ 16031978 (+)
LOC120565290 comp coding downstream 100132 16034712 ~ 16047921 (+)
il12rb1 NA coding downstream 154166 16088746 ~ 16101551 (+)
mast3b mast3 coding downstream 196566 16131146 ~ 16165817 (+)
G95844 NA non-coding upstream 35023 15895677 ~ 15896005 (+)
G95830 NA non-coding upstream 109662 15814538 ~ 15821366 (+)
G95814 ndufs7 non-coding upstream 145381 15779865 ~ 15785647 (+)
G95806 NA non-coding upstream 164018 15766763 ~ 15767010 (+)
G95804 NA non-coding upstream 178938 15748410 ~ 15752090 (+)
G95873 NA non-coding downstream 38601 15973181 ~ 15974350 (+)
G95876 NA non-coding downstream 45172 15979752 ~ 15980626 (+)
G95877 NA non-coding downstream 46110 15980690 ~ 15981498 (+)
G95929 NA non-coding downstream 135774 16070354 ~ 16127940 (+)
G95952 NA non-coding downstream 231622 16166202 ~ 16169844 (+)
LOC120564959 LOC104946909,LOC103360792,LOC102294988,LOC101486556,LOC102197099 other upstream 298216 15523929 ~ 15632812 (+)
dennd1b NA other upstream 1007183 14810368 ~ 14923845 (+)
LOC120565380 NA other upstream 1226675 14689382 ~ 14704353 (+)
G95460 NA other upstream 1309615 14619358 ~ 14621413 (+)
LOC120564965 LOC102299696 other upstream 2531284 13390823 ~ 13399744 (+)
kcnn1b LOC104945110,LOC103355562 other downstream 355243 16289823 ~ 16301000 (+)
kdm4b kdm4b,LOC104945107,LOC108234360,LOC108412081 other downstream 385914 16320494 ~ 16376449 (+)
nppc nppc,LOC104932751,LOC103372810 other downstream 1921051 17855631 ~ 17859411 (+)
nmur1a LOC103368681,LOC104952433 other downstream 2712123 18646703 ~ 18665113 (+)
G96418 tsc22d2 other downstream 2848020 18782600 ~ 18785636 (+)

Expression


Co-expression Network