G96361


Basic Information

Item Value
gene id G96361
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 18619558 ~ 18621342 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU129966
TGCCAGGGGGTTATTGTGCTGAACAGTATACATTATTGTTGTGACTGCACATAATGTTTACAGAGTTTTGCAACTGAGAAAAAGAAATTAGTAAAGACTTTATAAAAGAAGGTACATGCAATTTGTAGTTaaggactgttcgttatttatttcaggggccacaggaggagttttgggacctttagtcaaaatagacatgaccctccccacaccagtaataatttttctatgaccctccataacaatttagaaaaaaagGGATGACCCTGCCCCAAAAACGTATCAATACCTGCTGGACAGatttgcgcttggcaaagatatacagattggtcatgccagacataattattttattactattttttaaacaatacaattatcCGTTTCAGCTACCAGGGGGAGCAGTGCTCCCCCGCCCCTCCAATTGCACCTGACTCtccaattgcacctgactgcagtacgcagatcggggttgggctaaatgtgggcggagctaaacgtttgactccgcgCGGGCGCCATCTGGTGGCGGAAATAAGGTAGCACATTCTCAAATGTCAATGCAGCACCTACGGACAgcgattataataataaataaataaatacatacatacatacatacatacatacatacatacatacatacatacatacatacatacatacatacatacatacatacatacacacacacaatggggttgggtttagaaaagaAGAACCAGTTGGTATTAGGAAAataagaacggggaaagcaaatgTGACTCGCGGGAAATGAGCCCtggtctctgggggacgcgagacaacaacggacggttgggttaaggaaaaaaagaacggggaaagcaaacgtgaCTCACGGGAAAcaagccccggtctctgggggacgcaaatCGCGGGAAACGAGCCCTGGCCCCTGGGGGACGCGACTTGCGGGAGCcccggtctctggaggacgCGAATCGCAGGAAACGAGCCACGGCCTCTGGGGGACGCGACTTGCGGGAGccctggtctctggaggacgtGAATCGCGGGAAACAAGCCCTGGTCTCTGGGGGACACGACTTGCGGGAAACAAGACCCGGTCTCTGAGGGGGCACGAATCGCGGGAAATAAGCCCCGgcctctgggggacgcaacttGCGGgagccccggtctctggggaACGGcaATCACGGGAAACGAGTcccggtctctgggggacgcgacTTGCAGGAAAcaagccccggtctctgggggacgcgaaTCGCAGGAAACGAGCCCCGGCCTCTGGGGGACGCGACTTGCGGgagccccggtctctgggggacgccaATCACGGGAAACgagccccggtctctgggggacgcgacTTGCGGGATCCCCGGTCTCTGGAGGAAGAGAATCGCGGGAAACGAGCCCCGGTCTCTGAGGGAGGTGAGACCGCAATGGACGGTTTGGTGAAGGAAAACAACAATGGGGAAAGCAAACGTGACTCGCGGGAAATGAGCTCCGGTCTCTGGGGTgaaagcatggatgtattaagaggtgaaagtcctgtgtttttccgACACACATTCTTCCTCTTCGGT
>TU129967
TGCCAGGGGGTTATTGTGCTGAACAGTATACATTATTGTTGTGACTGCACATAATGTTTACAGAGTTTTGCAACTGAGAAAAAGAAATTAGTAAAGACTTTATAAAAGAAGGTACATGCAATTTGTAGTTaaggactgttcgttatttatttcaggggccacaggaggagttttgggacctttagtcaaaatagacatgaccctccccacaccagtaataatttttctatgaccctccataacaatttagaaaaaaagGGATGACCCTGCCCCAAAAACGTATCAATACCTGCTGGACAGatttgcgcttggcaaagatatacagattggtcatgccagacataattattttattactattttttaaacaatacaattatcCGTTTCAGCTACCAGGGGGAGCAGTGCTCCCCCGCCCCTCCAATTGCACCTGACTCtccaattgcacctgactgcagtacgcagatcggggttgggctaaatgtgggcggagctaaacgtttgactccgcgCGGGCGCCATCTGGTGGCGGAAATAAGGTAGCACATTCTCAAATGTCAATGCAGCACCTACGGACAgcgattataataataaataaataaatacatacatacatacatacatacatacatacatacatacatacatacatacatacatacatacatacatacatacatacatacacacacacaatggggttgggtttagaaaagaAGAACCAGTTGGTATTAGGAAAataagaacggggaaagcaaatgTGACTCGCGGGAAATGAGCCCtggtctctgggggacgcgagacaacaacggacggttgggttaaggaaaaaaagaacggggaaagcaaacgtgaCTCACGGGAAAcaagccccggtctctgggggacgcaaatCGCGGGAAACGAGCCCTGGCCCCTGGGGGACGCGACTTGCGGGAGCcccggtctctggaggacgCGAATCGCAGGAAACGAGCCACGGCCTCTGGGGGACGCGACTTGCGGGAGccctggtctctgggggaCGCCAATCACGGGAAACGAGcccggtctctgggggacgcgacTTGCAGGAAAcaagccccggtctctgggggacgccaATCACGGGAAACGAGTcccggtctctgggggacgcgacTTGCAGGAAAcaagccccggtctctgggggacgcgaaTCGCAGGAAACGAGCCCCGGCCTCTGGGGGACGCGACTTGCGGgagccccggtctctgggggacgccaATCACGGGAAACgagccccggtctctgggggacgcgacTTGCGGGATCCCCGGTCTCTGGAGGAAGAGAATCGCGGGAAACGAGCCCCGGTCTCTGAGGGAGGTGAGACCGCAATGGACGGTTTGGTGAAGGAAAACAACAATGGGGAAAGCAAACGTGACTCGCGGGAAATGAGCTCCGGTCTCTGGGGTgaaagcatggatgtattaagaggtgaaagtcctgtgtttttccgACACACATTCTTCCTCTTCGGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU129966 True 1574 lncRNA 0.51 2 18619558 18621342
TU129967 False 1503 lncRNA 0.51 2 18619558 18621342

Neighbor

gene id symbol gene type direction distance location
mfsd8l1 mfsd8 coding upstream 677823 17928603 ~ 17941735 (+)
polr2h polr2h coding upstream 692922 17920839 ~ 17926636 (+)
LOC120566214 NA coding upstream 747147 17872278 ~ 17872411 (+)
LOC120566229 NA coding upstream 747711 17871710 ~ 17871847 (+)
LOC120566228 NA coding upstream 750756 17868666 ~ 17868802 (+)
LOC120565952 NA coding downstream 60728 18682070 ~ 18683397 (+)
LOC120565951 NA coding downstream 62856 18684198 ~ 18685748 (+)
LOC120565634 NA coding downstream 67877 18689219 ~ 18701367 (+)
LOC120565635 LOC103364550,LOC102304031,LOC101475589 coding downstream 80552 18701894 ~ 18712465 (+)
LOC120565156 NA coding downstream 94412 18715754 ~ 18733910 (+)
G96353 NA non-coding upstream 6298 18613029 ~ 18613260 (+)
G96341 NA non-coding upstream 32593 18586628 ~ 18586965 (+)
G96273 NA non-coding upstream 727160 17891652 ~ 17892398 (+)
LOC120565502 NA non-coding upstream 920510 17670680 ~ 17699048 (+)
LOC120564955 NA non-coding upstream 982838 17620798 ~ 17636720 (+)
G96372 NA non-coding downstream 38300 18659642 ~ 18659881 (+)
G96398 NA non-coding downstream 123174 18744516 ~ 18744857 (+)
G96399 NA non-coding downstream 127778 18749120 ~ 18751861 (+)
G96417 NA non-coding downstream 160852 18782194 ~ 18859921 (+)
G96438 psmd1,LOC107550672,LOC106613492 non-coding downstream 402941 19024283 ~ 19029464 (+)
nppc nppc,LOC104932751,LOC103372810 other upstream 760147 17855631 ~ 17859411 (+)
kdm4b kdm4b,LOC104945107,LOC108234360,LOC108412081 other upstream 2243109 16320494 ~ 16376449 (+)
kcnn1b LOC104945110,LOC103355562 other upstream 2318558 16289823 ~ 16301000 (+)
LOC120564959 LOC104946909,LOC103360792,LOC102294988,LOC101486556,LOC102197099 other upstream 2986746 15523929 ~ 15632812 (+)
dennd1b NA other upstream 3695713 14810368 ~ 14923845 (+)
nmur1a LOC103368681,LOC104952433 other downstream 25361 18646703 ~ 18665113 (+)
G96418 tsc22d2 other downstream 161258 18782600 ~ 18785636 (+)
G96513 NA other downstream 909425 19530767 ~ 19531677 (+)
prkacba prkacb other downstream 1927657 20548999 ~ 20564824 (+)
LOC120565275 ctxn1,LOC108166259,LOC106954365,LOC103138526,LOC104947303,LOC105353898 other downstream 2789994 21411336 ~ 21441558 (+)

Expression


Co-expression Network