G96372


Basic Information

Item Value
gene id G96372
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 18659642 ~ 18659881 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU129986
atttcaaattaattaatatttgtgaagactaggtgtttcgttagctgtgactgtcccttcaatcctagctacaaatcacggatagttaggttccttttcggcgtaattcgagtatatttacagtttgaatttcgtcacgccacatatacaacatctaactaaatgtcttataaagctaacaacggtgtccgatttcaagttaatgaatttttgtgaattccagaggaattctaagaggag

Function

GO:

id name namespace
GO:0019538 protein metabolic process biological_process
GO:0043603 cellular amide metabolic process biological_process
GO:0043604 amide biosynthetic process biological_process
GO:1901564 organonitrogen compound metabolic process biological_process
GO:1901566 organonitrogen compound biosynthetic process biological_process
GO:0009058 biosynthetic process biological_process
GO:0009059 macromolecule biosynthetic process biological_process
GO:0043043 peptide biosynthetic process biological_process
GO:1901576 organic substance biosynthetic process biological_process
GO:0006412 translation biological_process
GO:0010467 gene expression biological_process
GO:0044249 cellular biosynthetic process biological_process
GO:0044260 cellular macromolecule metabolic process biological_process
GO:0044267 cellular protein metabolic process biological_process
GO:0044271 cellular nitrogen compound biosynthetic process biological_process
GO:0006518 peptide metabolic process biological_process
GO:0043170 macromolecule metabolic process biological_process
GO:0034641 cellular nitrogen compound metabolic process biological_process
GO:0034645 cellular macromolecule biosynthetic process biological_process

KEGG:

id description
ko03010 Ribosome

RNA

RNA id representative length rna type GC content exon number start site end site
TU129986 True 240 lncRNA 0.35 1 18659642 18659881

Neighbor

gene id symbol gene type direction distance location
mfsd8l1 mfsd8 coding upstream 717907 17928603 ~ 17941735 (+)
polr2h polr2h coding upstream 733006 17920839 ~ 17926636 (+)
LOC120566214 NA coding upstream 787231 17872278 ~ 17872411 (+)
LOC120566229 NA coding upstream 787795 17871710 ~ 17871847 (+)
LOC120566228 NA coding upstream 790840 17868666 ~ 17868802 (+)
LOC120565952 NA coding downstream 22189 18682070 ~ 18683397 (+)
LOC120565951 NA coding downstream 24317 18684198 ~ 18685748 (+)
LOC120565634 NA coding downstream 29338 18689219 ~ 18701367 (+)
LOC120565635 LOC103364550,LOC102304031,LOC101475589 coding downstream 42013 18701894 ~ 18712465 (+)
LOC120565156 NA coding downstream 55873 18715754 ~ 18733910 (+)
G96361 NA non-coding upstream 38300 18619558 ~ 18621342 (+)
G96353 NA non-coding upstream 46382 18613029 ~ 18613260 (+)
G96341 NA non-coding upstream 72677 18586628 ~ 18586965 (+)
G96273 NA non-coding upstream 767244 17891652 ~ 17892398 (+)
LOC120565502 NA non-coding upstream 960594 17670680 ~ 17699048 (+)
G96398 NA non-coding downstream 84635 18744516 ~ 18744857 (+)
G96399 NA non-coding downstream 89239 18749120 ~ 18751861 (+)
G96417 NA non-coding downstream 122313 18782194 ~ 18859921 (+)
G96438 psmd1,LOC107550672,LOC106613492 non-coding downstream 364402 19024283 ~ 19029464 (+)
G96445 psmd1 non-coding downstream 396460 19056341 ~ 19057812 (+)
nppc nppc,LOC104932751,LOC103372810 other upstream 800231 17855631 ~ 17859411 (+)
kdm4b kdm4b,LOC104945107,LOC108234360,LOC108412081 other upstream 2283193 16320494 ~ 16376449 (+)
kcnn1b LOC104945110,LOC103355562 other upstream 2358642 16289823 ~ 16301000 (+)
LOC120564959 LOC104946909,LOC103360792,LOC102294988,LOC101486556,LOC102197099 other upstream 3026830 15523929 ~ 15632812 (+)
dennd1b NA other upstream 3735797 14810368 ~ 14923845 (+)
G96418 tsc22d2 other downstream 122719 18782600 ~ 18785636 (+)
G96513 NA other downstream 870886 19530767 ~ 19531677 (+)
prkacba prkacb other downstream 1889118 20548999 ~ 20564824 (+)
LOC120565275 ctxn1,LOC108166259,LOC106954365,LOC103138526,LOC104947303,LOC105353898 other downstream 2751455 21411336 ~ 21441558 (+)
lsm7 lsm7,LOC102793261 other downstream 2895013 21554894 ~ 21557731 (+)

Expression


Co-expression Network