G97295


Basic Information

Item Value
gene id G97295
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 22156111 ~ 22157958 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU131286
CGAGTTTTAAAAATAATCGTGGTTTATAAAACCCAGATATGACAGGATCACCAAAGTGTATACAGAAATACAAATACCATCAGGAAAACCATCATAGAACGGTGTTAATACACTCGACATGTACAAACTACTCTGTAAAAGGGACTCGGGGGAGGATGGGTcagacatttttctttctttatgtcTCTTAAAATCACATTTAGCCACAATGTATTTATtctattatcttttttttgtatcttatcAAAGTAGAACATCCATCTACCAAACTACAGGACTATCACGTTCAGCTAGATTAAAGGGTACGAACAACATCacgagagagggaggggtggaCACATATCAAGCACTTTAACATCATGGGGGTTTCAGCAAGCAGTGGAAACACAATCACCCATGAGAAAAATGGGATGTCAGGGCTGAGGATCAGCTCAAACACTAAATGTACAAAATAaccctgtttttgttttctgtcactGGGTTACACATACTGAACATCTGTGAACAGACACTGGCCGCTAAAGATCTGGGATCAGTTTAACAGTATCTTGTCATGGTGTGGGTCATCTCTGTTCCTGTGCCCTACAGTATGTCAAAGTGCTGTCAGCAGGGCAGTGTACAACAACAGATGTAACGTCCACAATATTTGCATGCACATTCACAAATGTACAAACGGTTTTTACAGCTTCAGGAGACAGTAACGTGCCCCTCGCACCTCCTCCATGAGCCCTGGACGCAGAGCCTCGAACAAAGAAGGAATCACCAACAAGATACAACCAATCACATTCTCCAGTTCTATGGATTCTTTTCTATTCTTATACAAATACATTGTCAACAGATTTACACATGAAAAGAGTGCAGGATCGTGACcagtcaaaaaaacaaacaaaaaatagctCCTCATCACCTAAAAAATACTGCTTGTCTTGGAGCAAAAATGGCAACGTATGAAATCAATCATTGTCACAGTAGCGACAATGATTGCTAATATACACATCATGTCAAATAAATTAAGACCTATGTACAATGTGAAACTAAAGCAGCATGCACGCAAGACAACAGAGCCTTTTTACAAAACTATCTGCTGTAGTTGTGCTCTCCGACACAAAAGAGAGAGGCAATGtgggttgtgtgtatgtgtgtgccgtgtgttATGCCTGTATACagttatggtgtgtgtgtgtgtgtgtgtgtgtccagtgtaTTTAAATGGGTCAGGAAGCTACCCATCTTCTACATTTCAACATATTTTTGAACTTTCTAGCTTTCTAGTTCACATTAAGCTCGTTGCACACAGAAGCTTTTCAGCCTTTTAGCCGCTACGGGAAAAACAGAAGTAGAAGAAACAGGACTTTCTGTCACACATTTGTCTCGTAGCTCTCTGGGCTTCGTCTCGCTACTGGCGGAGGGTGACACAGTGCAGCCAGAGTGGAGCGGAGAGCAAAGTGAGGGGGTCAAACAGGAAGAGAAACCCACAAACCAGaattaaaatgaacatccttTCTTTAAAAGGCAGGGGGCCctttaacagcagcagcaacacacctttaaaataataacagtTCTGTAAGTGTGAACTGCTGGTTTGAAAATaagcagagggggggggggggcaaatgGTGGATGTCAGATGTACAGCACATTTCTCCTGGTTGTTAACTAACTTTTACTTATCCAAGATTAGTAGACATTTGATCTAACAAATCACAACCCTtgaaatcgttttttttttttttttttttttttaaaagtgctaaAATAATCGAGGCAACATtagagacaaacaaacaaacattcatCTGGTGACAGGATCGCTGAATGTGCTGTGAAACATGTCAGAGATTATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU131286 True 1848 lncRNA 0.40 1 22156111 22157958

Neighbor

gene id symbol gene type direction distance location
sin3b sin3b,LOC102797688 coding upstream 1778 22134681 ~ 22154333 (+)
haus5 haus5,LOC102794657 coding upstream 21774 22124524 ~ 22134337 (+)
LOC120565906 LOC104924615 coding upstream 32019 22118994 ~ 22124092 (+)
rx1 LOC101073544,LOC104924617,LOC100705124,LOC102200154,LOC101467495,LOC102301254 coding upstream 43188 22103969 ~ 22112923 (+)
matk matk,LOC102798474 coding upstream 65261 22079192 ~ 22090850 (+)
acbd6 acbd6,LOC106907417,LOC103138489 coding downstream 71447 22229405 ~ 22259111 (+)
LOC120564914 cacna1e,LOC103367400,LOC102302220,LOC102196101,LOC101487658 coding downstream 202573 22360531 ~ 22453997 (+)
si:dkey-21p1.3 NA coding downstream 300503 22458461 ~ 22485160 (+)
abl2 abl2 coding downstream 343590 22501548 ~ 22529009 (+)
osbpl9 osbpl9 coding downstream 372129 22530087 ~ 22570300 (+)
G97263 NA non-coding upstream 62737 22091389 ~ 22093374 (+)
G97190 NA non-coding upstream 120437 22033797 ~ 22035674 (+)
LOC120565815 NA non-coding upstream 148758 22005775 ~ 22007353 (+)
G97181 NA non-coding upstream 158368 21997413 ~ 21997743 (+)
G97170 cope non-coding upstream 211550 21941105 ~ 21944561 (+)
G97297 NA non-coding downstream 99 22158057 ~ 22174393 (+)
G97335 NA non-coding downstream 155690 22313648 ~ 22316358 (+)
G97338 NA non-coding downstream 164534 22322492 ~ 22322855 (+)
G97410 NA non-coding downstream 436538 22594496 ~ 22595277 (+)
LOC120565733 NA non-coding downstream 622649 22780607 ~ 22800145 (+)
G97093 NA other upstream 374111 21690897 ~ 21782000 (+)
lsm7 lsm7,LOC102793261 other upstream 598380 21554894 ~ 21557731 (+)
LOC120565275 ctxn1,LOC108166259,LOC106954365,LOC103138526,LOC104947303,LOC105353898 other upstream 714553 21411336 ~ 21441558 (+)
prkacba prkacb other upstream 1591287 20548999 ~ 20564824 (+)
G96513 NA other upstream 2624434 19530767 ~ 19531677 (+)
G97321 NA other downstream 125688 22283646 ~ 22287272 (+)
LOC120565764 LOC103367403 other downstream 327553 22485511 ~ 22491235 (+)
soat1 soat1,LOC102796196 other downstream 334999 22492957 ~ 22501015 (+)
LOC120566218 NA other downstream 413796 22571754 ~ 22576548 (+)
LOC120566227 NA other downstream 414511 22572469 ~ 22572551 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_035509 NA non-coding NC_007119.7 CM002892.2 14241585 ~ 14246353 (+)