G97601


Basic Information

Item Value
gene id G97601
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 23465238 ~ 23466660 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU131702
aaattcagaactTTGGGTAAATATATTCATCTTGGAACCAAGTTTTTAGGGGTTTTAGGCCATAAATGAATGCATATTGGCATGTCAACTATTTTATGTTTAATATCCTAAATATCTAAAATTAGTAAGTGATATTAATTACAACATATTCATTATGTATTGTGTTGTCATGAATGTAAAAGTTACCTACTTAAATTGGGTGCCAGTGCTCAGACTCCTGGCATAGTGACACCTTGGCAGACTCAACCAACATACCTAGTATCCAGCATCGGCAACATTTGGACAGTGTGTTACAATTTACAATCATTAAAGCTTTTGGCCGAATTGCAATGAAACTGGCAATCACATACTGTTAAATTTCCATTACATTAAAACTCTGACTTTTGACCTATTGCATAAAGCATTTCACTCACTAACTGGGTAAAAATGTTGTTACATGCCAGCTGGTGTGATGTGCTAACGTTCGGGCAAGAGTAGTTGGCTTCACAGCAGCTGATTTGTTGCCCAAAACTCCAGCTCGCCAAGATAAACTGGGCAGGAGGCCGATGAGGCGATGGTTGAAAAGTTACAAGCTTGTTGCTGTGAAGGTCAATTGAACAATAAAGTTCACAGGCATGGTGACTTTTGTTGTAACAACTGACATTGTAACCAAATATCACACCAGCGTAATAAAAGGGACAACTTGATTTTAGAAAACTCTGAATCTGGAATCTACTATTACTCCAAAGTAAAGTGTCTTTTAATtgtttgcataaaaaaaatagatgtaCATGCAGTCAAGTTAATTAATGGACCAGTCATAAAAGACAACTAGATCCAGGTCATTAGCGCTTGCTCATAAAGGTTTGTGGCTCAGGAAGTAGAGGTTTGAGGTAGATAGGGATATGTTTGGCCGGTTTGATCCCTGGCTCCTCCTGTCCACATGTTGAAATGTGAGTGTCAGAATGTGACTTttggcagatttttattttgattccaACTTTGTATGCTTTGGTTAATTGCCCAGTTTCAGTTTtagcagtgtgtgtattttgcatTTGGTTTTATTGGTAGatgtgttgcatgttttcaCAGTTAGTATTTACATAGTTTTgtggatttgctgtgttttctTAATTGTTTGTTGGACTGGGAATCAAAGTTATGAGAAGCAGCTGTGATTGCCCCTTCACAGCTCAGGATTGGCCACAGGATAGTATGATGTGCTTGTTAAAGGTGGATGTGAAGCAGGTGCAGAGGCGAAGGaggacaaagaaaaagaagctCAGGTGCAACCAGCTGGAGGAGAGGTTTTTATTTTAGCACTTGTAATGCTGTGCAGAcgtaacatgtttttattttaaataaatcattgaAGAATCATCCTGTGGAACTTAAGTTTTTAACAGTGGAAACACTTTTTTGCTGGTAAAAAAGGACCTCG

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0009063 cellular amino acid catabolic process biological_process
GO:0009072 aromatic amino acid family metabolic process biological_process
GO:0009074 aromatic amino acid family catabolic process biological_process
GO:1901361 organic cyclic compound catabolic process biological_process
GO:0046395 carboxylic acid catabolic process biological_process
GO:0006520 cellular amino acid metabolic process biological_process
GO:0016054 organic acid catabolic process biological_process

KEGG:

id description
ko00360 Phenylalanine metabolism
ko04610 Complement and coagulation cascades

RNA

RNA id representative length rna type GC content exon number start site end site
TU131702 True 1423 lncRNA 0.38 1 23465238 23466660

Neighbor

gene id symbol gene type direction distance location
si:ch1073-396h14.1 LOC103365213 coding upstream 10455 23419944 ~ 23454783 (+)
ccl44 LOC103365223,LOC103463524,LOC102231954,LOC103138454,LOC103397632 coding upstream 129541 23331778 ~ 23335697 (+)
agbl4 agbl4 coding upstream 218923 22816551 ~ 23246315 (+)
bend5 bend5,LOC102785035 coding upstream 274161 23176507 ~ 23191077 (+)
dmrta2 dmrta2 coding upstream 687047 22775008 ~ 22778191 (+)
fam32a fam32a,LOC103365210 coding downstream 119141 23585801 ~ 23588140 (+)
hdgfl2 LOC103368921 coding downstream 124792 23591452 ~ 23599922 (+)
ap3d1 ap3d1 coding downstream 133656 23600316 ~ 23627747 (+)
LOC120564946 c2cd4c coding downstream 192959 23659619 ~ 23666284 (+)
LOC120565386 LOC104923650,LOC102308979,LOC100710383,LOC103369973,LOC102790487 coding downstream 323426 23790086 ~ 23835654 (+)
G97597 LOC103365214,LOC107393172 non-coding upstream 3870 23460283 ~ 23461368 (+)
G97572 NA non-coding upstream 39440 23401029 ~ 23425798 (+)
G97554 NA non-coding upstream 101758 23352840 ~ 23363480 (+)
G97559 NA non-coding upstream 102518 23360058 ~ 23362720 (+)
G97538 NA non-coding upstream 140739 23324259 ~ 23324499 (+)
G97602 NA non-coding downstream 80 23466740 ~ 23466993 (+)
G97603 NA non-coding downstream 978 23467638 ~ 23468117 (+)
G97605 NA non-coding downstream 6612 23473272 ~ 23473641 (+)
G97613 safb2,LOC102778639,LOC102201904,LOC103365207 non-coding downstream 27391 23494051 ~ 23497882 (+)
G97615 NA non-coding downstream 34316 23500976 ~ 23502578 (+)
LOC120565078 LOC104955513,LOC104923635,LOC103365215,LOC100690174 other upstream 84863 23378731 ~ 23380375 (+)
pole4 NA other upstream 141754 23321464 ~ 23323484 (+)
LOC120565086 NA other upstream 161547 23300806 ~ 23303691 (+)
spata6 spata6 other upstream 182567 23249129 ~ 23282671 (+)
rnf11b rnf11 other upstream 789060 22657480 ~ 22676178 (+)
G97596 lpl,LOC108280930,LOC105906969 other downstream 8122 23474782 ~ 23477818 (+)
cdc34a cdc34,LOC103368917,LOC104923648,LOC103397164,LOC107393183,LOC103156874 other downstream 164459 23631119 ~ 23650513 (+)
cks2 LOC104918474,LOC108230759,LOC102216377,LOC104949087,LOC105011584 other downstream 737681 24204341 ~ 24208141 (+)
LOC120565649 LOC103373964,LOC107081966 other downstream 1282357 24749017 ~ 24765225 (+)
G98012 dmbx1,LOC103373966,LOC108230579 other downstream 1315258 24781918 ~ 24783881 (+)

Expression


Co-expression Network