G101519 (LOC103356959,LOC104928288)


Basic Information

Item Value
gene id G101519
gene name LOC103356959,LOC104928288
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 39680078 ~ 39680526 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU136732
GTCGAAACCACAGAGTTGAGGCTGGGGGGGCTTTCTTGTGGAACCTGGATGCTGGGCAGCTGTGCTGGGCTTTGGAGAAGCTTGGGCTTCCGCTTGCTTCCAGGCTTGGGGCCTCTCTTCTTATGGGGCCGGGGTACGAGCTGTGTGTTCTCAGGTACAGTTCCGTTTTGGGCAGCGGCTGCTTCGGCCACAGCTTTGAGTAGGGCGATGGTCTCGCTCTTGGGCCGACGGCCTCTTACCCCCTTCCGGACAGGCAAAGGGGGCAGAGGGTTAGGGAGTCTGTAGGGGGACTGCATGGAACGCCTGCTGGGCTTGGAGGGTGACGCCGGGAGGATCTGCAGATTCTTTG

Function

NR:

description
PREDICTED: sex comb on midleg-like protein 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU136732 True 349 lncRNA 0.61 2 39680078 39680526

Neighbor

gene id symbol gene type direction distance location
LOC120566071 rai2 coding upstream 4518 39665221 ~ 39675560 (+)
nhsa LOC103369891 coding upstream 18586 39597704 ~ 39661492 (+)
LOC120564941 LOC100699266,LOC102791790,LOC102212335,LOC102290083,LOC101480793 coding upstream 135612 39516873 ~ 39544466 (+)
LOC120564940 LOC106537324 coding upstream 166420 39512710 ~ 39513658 (+)
slc34a2b LOC106512275,LOC107396065,LOC108240151 coding upstream 192600 39478853 ~ 39487478 (+)
LOC120565276 ap1s2,zgc:162858,LOC106942561,LOC107095773,LOC106921341,LOC103356955,LOC102795551,LOC101477195,LOC103463884,LOC102192022,LOC102311043 coding downstream 67222 39747748 ~ 39766179 (+)
shroom2a shroom2 coding downstream 95267 39775793 ~ 39816716 (+)
cldn34a NA coding downstream 136302 39816828 ~ 39823367 (+)
wwc3 wwc3 coding downstream 148430 39828956 ~ 39863261 (+)
tomm70a tomm70 coding downstream 231104 39911630 ~ 39920790 (+)
G101484 NA non-coding upstream 242013 39437654 ~ 39438065 (+)
G101464 NA non-coding upstream 401125 39278652 ~ 39278953 (+)
G101437 NA non-coding upstream 489297 39190066 ~ 39190781 (+)
G101427 NA non-coding upstream 501332 39178244 ~ 39178746 (+)
G101364 NA non-coding upstream 656498 39018380 ~ 39023580 (+)
G101579 NA non-coding downstream 191130 39871656 ~ 39872173 (+)
G101600 NA non-coding downstream 224510 39905036 ~ 39908510 (+)
G101666 NA non-coding downstream 303944 39984470 ~ 40018693 (+)
G101674 rp2 non-coding downstream 320379 40000905 ~ 40003839 (+)
LOC120565265 NA non-coding downstream 363656 40044182 ~ 40045506 (+)
reps2 reps2,LOC102792668 other upstream 87316 39561061 ~ 39592762 (+)
LOC120565708 LOC103369944,LOC100698021,LOC101482931,LOC102791229,LOC102291415,LOC102212992 other upstream 215628 39454120 ~ 39464450 (+)
prdm5 prdm5 other upstream 318345 39323584 ~ 39361733 (+)
usp46 usp46 other upstream 799473 38866435 ~ 38880605 (+)
G100843 NA other upstream 2190006 37463914 ~ 37490072 (+)
LOC120565298 cdkl5,LOC103356958 other downstream 13386 39693912 ~ 39740277 (+)
atp10a atp10a other downstream 834567 40515093 ~ 40559895 (+)
G102165 NA other downstream 1772148 41452674 ~ 41453306 (+)

Expression


Co-expression Network