LOC120564879


Basic Information

Item Value
gene id LOC120564879
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 15513151 ~ 15522405 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039810132.1
GCACTCACACATCCTGCTGTCAAGGATGTAGATGTATTTGAATGTTGTCGATATGACCGCTAGCCTTTTCCTCTTTCAATATGCCTGCAGCGATGCACCTCACTGTGCTTGTGTCCCTGTTTGCGGTGACTCTCTGTGAAAACAACACCACTTCCTCCACAACCAAATTTGCAAAGGAGATAACCACAAGTGCTGCACACCACACCAGTTTGGCTGCAAAGAAAACTACTTTATTCAATGTGAcaaccaacaacacacaacagccTCCAACAACACACCAGATTACCACTGCCGTCACTTCAGAAAACGTGTCATCATCACCACCGCCCTTGACTTCCCCACAAACACCCAACAGGACAGAGGAAATACATCCCAGTGTCACTCCTCCTCAGACTACAACGACCAACCAGACGTCCAACGAGACCGTTTTCCACAGATCAACACTCCCTCCGGCACCAGAATCACCAAACATCACTGCAACCATCACTGTAAACATaaccagcccagGTCTTTCACATGGGTGGGGAAAAGGTGACATAGTAGCAAATCCCGGCCTTGTGGCTATCCTTTGCATCTTCTGTATCATCTTCGTCCTTGTGCTGGTGGTTATCAGCGTGAAATGCATCCAATCGCCTAGGTCCAACTTCGAGAGGCTTGAAGACGTGCCGATGAGAAAAGTCACCGAGGAGTCTCCATTCGCCCAGTACTCAAAATGACAAAGGGGGCTTCAGACACTGAAATCCAGGAGGAGTCCAGTCTGCTGTACAATTCTTATTTCTTTACAAAACACTTTTGTCTCCTTTTAATTCTGCTGATTGAAGCTGAATCAACTCTTTCTCTGTAGtttcttttgaaaaaaagaatcagCCTAAAAAGCATATTCATAATTACACTCttaaatgtaacattataggaatacagtacatttaaagTTTCCATGATGATTTAGGGGATTTGTATTATCAACAGTGCATGGGAAGATGTATTTCCAGTATTGAAAGTTTACGTGAAAATAATGTTCTCTGCATGTATAAATGTCTTTTTGGGCAATTATTGTATACATAGAAACGTAATTGGAATGTACAAGTGTATGTGAAGTATACAGTttgtattatgttatttattacCATATATTATGTATAAATAATGTCTACCCTGGCCTGAGACATCCAGTGTAGATTAGTTTTGATGTACAAATAAACGTATTGGTTGAGTTACATTTTAGCAGGAACAGTGAAGAAAACCCAATTTATTGGAATAATTATAGCCAAGAAATATTAAGACTGCCAACTAACCAAGGGAAGAGATGAGATAACAAAGGAAACCTATTTAGACTATCTACAAATAATGCCAACAAGTGCACTTTGGCTTGCTAAACCTGCAAATTCAAATACTGGTAGTTTATCTTTGTTGGATCTGCTGTTATCCTGGTCCATTAGATTATTTCTGCCTTCTAAAAACAATGAAACTAGTCTGCAGAAACATAACAGGCCTTTTTTTTGTACAGCTAAAGACAGATGTTATATCTCTCACATACAATGTTGACACATAAAGTCCTCTACATGTTCTGTGTGAGAGGACTACATGAAATGTGTCAACATTGTATGTGAATCTTATGTGCATGGCAAAGCTGCTCTTCTTGATTAATTTTAATTCGGTTAACATCCTACAGTGatgactgagacacacacacagccttcttCCAATAGAAAATGAAACATTCAGACTACTTTCAAACTATTTTGACCAAGTAATTTTGCTGCACGTTTACGCTCAGGGGGTTAAAAATCTGGATGATCTGATCATCATATAAACCTTTTCTGTGTGCATTACACAATTGCTGCCAGACAGATGTAAAGCACATTTGTGATATtttcaatgaaataaaaggAATATTTCTAAAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039810132.1 True 1906 mRNA 0.39 4 15513151 15522405

Neighbor

gene id symbol gene type direction distance location
LOC120565844 NA coding upstream 876 15506857 ~ 15512275 (+)
mpv17l2 NA coding upstream 7930 15498026 ~ 15505221 (+)
LOC120566177 jund,LOC104930914,LOC103360786,LOC101484003 coding upstream 40388 15470647 ~ 15472763 (+)
lsm4 lsm4,LOC106613629 coding upstream 130372 15379515 ~ 15382779 (+)
ddx49 ddx49 coding upstream 162558 15343666 ~ 15350593 (+)
LOC120564991 NA coding downstream 197784 15720189 ~ 15723206 (+)
gamt gamt,LOC102782137 coding downstream 248888 15771293 ~ 15775561 (+)
LOC120564897 NA coding downstream 366171 15888576 ~ 15896422 (+)
LOC120565334 LOC104959369 coding downstream 468145 15990550 ~ 15994166 (+)
tmem38a tmem38a coding downstream 500172 16022577 ~ 16031978 (+)
G95710 NA non-coding upstream 34994 15474594 ~ 15478157 (+)
G95681 NA non-coding upstream 124009 15387998 ~ 15389142 (+)
G95640 NA non-coding upstream 215958 15296284 ~ 15297193 (+)
LOC120565370 NA non-coding upstream 244966 15222133 ~ 15268185 (+)
G95496 crb1,LOC102787887,LOC102294192,LOC103365562 non-coding upstream 581070 14930512 ~ 14932081 (+)
G95729 NA non-coding downstream 110508 15632913 ~ 15633568 (+)
G95731 ifi30 non-coding downstream 112093 15634498 ~ 15635947 (+)
G95735 NA non-coding downstream 117347 15639752 ~ 15646044 (+)
LOC120565654 NA non-coding downstream 154005 15676410 ~ 15681761 (+)
G95799 LOC103355525,LOC105938313,LOC101465035,LOC103143843,LOC106944932,LOC103463346,LOC106922741,LOC102200744 non-coding downstream 213547 15735952 ~ 15738435 (+)
dennd1b NA other upstream 589306 14810368 ~ 14923845 (+)
LOC120565380 NA other upstream 808798 14689382 ~ 14704353 (+)
G95460 NA other upstream 891738 14619358 ~ 14621413 (+)
LOC120564965 LOC102299696 other upstream 2113407 13390823 ~ 13399744 (+)
LOC120564964 LOC102797871,LOC101481459,LOC102301033,LOC106675533,LOC102797273,LOC102300313,LOC102200286 other upstream 2130404 13379398 ~ 13382747 (+)
LOC120564959 LOC104946909,LOC103360792,LOC102294988,LOC101486556,LOC102197099 other downstream 1524 15523929 ~ 15632812 (+)
kcnn1b LOC104945110,LOC103355562 other downstream 767418 16289823 ~ 16301000 (+)
kdm4b kdm4b,LOC104945107,LOC108234360,LOC108412081 other downstream 798089 16320494 ~ 16376449 (+)
nppc nppc,LOC104932751,LOC103372810 other downstream 2333226 17855631 ~ 17859411 (+)
nmur1a LOC103368681,LOC104952433 other downstream 3124298 18646703 ~ 18665113 (+)

Expression


Co-expression Network