LOC120564897


Basic Information

Item Value
gene id LOC120564897
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 15888576 ~ 15896422 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039810158.1
GACACTTGTCCCATGATTGTGGGTAAAGTGAAGAAATCAATTCCTAGAATGAGAACTGTAAAGTCAAAGGAGAAGATTAAAGTTGCAACATCAAAAAGCAACTCCACCTCAGCCAATGTTACTACGTGTGAGACATCAGGGAATATAATGAAGCTTTGTGTCAACCTAATGCCTTTTCTGGCTGCAGCCAAGGAGCccgtggaggaagaggagggaaacGAAGAGGACAACAGCTGCACGAGTAAAAAGGAACCAGAAACCAGCAGCAAAAATAATGACCCATCTGTCACTAAATCTGTGGAACAAACATTTAATTCTTTCATAGGATTAACTTTGGACACTGACACCGAACAACCAGTAAGTCCTCAGTTTGTGCTGCCACCTATAACTCAATCTAAACCAGCTCCTGAGTGTTGTGACCATCAGAAGAGCCTCATTCCTCGACCTCTAATCAGTTTATCCGAGCAAACAAGGACCATCTCCTCAAACTTCAGTACAAAAGGCTGCGGAGGCGGTGGGTTAGTTACAGGACAAGTAGCAGACAGCAGGCCCTGGATAGCCAATCCCCTGTTCTCTAAAAGTAGATCTTCTGAGTTTCGTCTGCCTGACATCTCCTTGTCCAGTCTGGACGCTCTGCTGCATACGGTCACACAGAAactggggaggaagaggagaggctTTGATGAAGGGCTGTGGGGACGTGTCCAGTCCGATCATCTCCTCATGGCTGTTAGTGAACAACgtttgagagagagaagcaTCACAGAGAACAGAAACCTGGTCAACATtAAAACCGTAACAGAAACATCAGTGGGTGGAAGCAGTGTAACCAGACAGAGGAGCCTGCCTCCACTTTTATCTGCACCGAAACCAATGCTCATCCTCAATATGACGAAGAAAAACATCCCGACTTCCAACACGCTGCAGTGATTCATCATAAACGACAAACTGAACTTACAACATACagcacagtatttttttttaaatgatacagGAAACCATATAGTTTTATTTTCCTTCAGGACAATACATTCACAACAGACA
>XM_039810159.1
ccaaagttacagtgagtaggCCTATGTTTGGCAGCGTATGTTgtgagcagctagctagctcctcGGCTGACAGCCTGACAGTGAACAAAAATAGCTGTTGTCCACCACTACAAACAAAGACAGGAGGAAAAACCAAGGAGCccgtggaggaagaggagggaaacGAAGAGGACAACAGCTGCACGAGTAAAAAGGAACCAGAAACCAGCAGCAAAAATAATGACCCATCTGTCACTAAATCTGTGGAACAAACATTTAATTCTTTCATAGGATTAACTTTGGACACTGACACCGAACAACCAGTAAGTCCTCAGTTTGTGCTGCCACCTATAACTCAATCTAAACCAGCTCCTGAGTGTTGTGACCATCAGAAGAGCCTCATTCCTCGACCTCTAATCAGTTTATCCGAGCAAACAAGGACCATCTCCTCAAACTTCAGTACAAAAGGCTGCGGAGGCGGTGGGTTAGTTACAGGACAAGTAGCAGACAGCAGGCCCTGGATAGCCAATCCCCTGTTCTCTAAAAGTAGATCTTCTGAGTTTCGTCTGCCTGACATCTCCTTGTCCAGTCTGGACGCTCTGCTGCATACGGTCACACAGAAactggggaggaagaggagaggctTTGATGAAGGGCTGTGGGGACGTGTCCAGTCCGATCATCTCCTCATGGCTGTTAGTGAACAACgtttgagagagagaagcaTCACAGAGAACAGAAACCTGGTCAACATtAAAACCGTAACAGAAACATCAGTGGGTGGAAGCAGTGTAACCAGACAGAGGAGCCTGCCTCCACTTTTATCTGCACCGAAACCAATGCTCATCCTCAATATGACGAAGAAAAACATCCCGACTTCCAACACGCTGCAGTGATTCATCATAAACGACAAACTGAACTTACAACATACagcacagtatttttttttaaatgatacagGAAACCATATAGTTTTATTTTCCTTCAGGACAATACATTCACAACAGACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039810158.1 True 1044 mRNA 0.45 3 15890054 15896422
XM_039810159.1 False 989 mRNA 0.46 4 15888576 15896422

Neighbor

gene id symbol gene type direction distance location
gamt gamt,LOC102782137 coding upstream 113015 15771293 ~ 15775561 (+)
LOC120564991 NA coding upstream 165370 15720189 ~ 15723206 (+)
LOC120564879 NA coding upstream 366171 15513151 ~ 15522405 (+)
LOC120565844 NA coding upstream 376301 15506857 ~ 15512275 (+)
mpv17l2 NA coding upstream 383355 15498026 ~ 15505221 (+)
LOC120565334 LOC104959369 coding downstream 94128 15990550 ~ 15994166 (+)
tmem38a tmem38a coding downstream 126155 16022577 ~ 16031978 (+)
LOC120565290 comp coding downstream 138290 16034712 ~ 16047921 (+)
il12rb1 NA coding downstream 192324 16088746 ~ 16101551 (+)
mast3b mast3 coding downstream 234724 16131146 ~ 16165817 (+)
G95830 NA non-coding upstream 67210 15814538 ~ 15821366 (+)
G95814 ndufs7 non-coding upstream 102929 15779865 ~ 15785647 (+)
G95806 NA non-coding upstream 121566 15766763 ~ 15767010 (+)
G95804 NA non-coding upstream 136486 15748410 ~ 15752090 (+)
G95799 LOC103355525,LOC105938313,LOC101465035,LOC103143843,LOC106944932,LOC103463346,LOC106922741,LOC102200744 non-coding upstream 150141 15735952 ~ 15738435 (+)
G95853 apba3,LOC104946396,LOC105938289,LOC107096970,LOC103395862,LOC107392810,LOC103143878 non-coding downstream 34606 15931028 ~ 15934580 (+)
G95873 NA non-coding downstream 76759 15973181 ~ 15974350 (+)
G95876 NA non-coding downstream 83330 15979752 ~ 15980626 (+)
G95877 NA non-coding downstream 84268 15980690 ~ 15981498 (+)
G95929 NA non-coding downstream 173932 16070354 ~ 16127940 (+)
LOC120564959 LOC104946909,LOC103360792,LOC102294988,LOC101486556,LOC102197099 other upstream 255764 15523929 ~ 15632812 (+)
dennd1b NA other upstream 964731 14810368 ~ 14923845 (+)
LOC120565380 NA other upstream 1184223 14689382 ~ 14704353 (+)
G95460 NA other upstream 1267163 14619358 ~ 14621413 (+)
LOC120564965 LOC102299696 other upstream 2488832 13390823 ~ 13399744 (+)
kcnn1b LOC104945110,LOC103355562 other downstream 393401 16289823 ~ 16301000 (+)
kdm4b kdm4b,LOC104945107,LOC108234360,LOC108412081 other downstream 424072 16320494 ~ 16376449 (+)
nppc nppc,LOC104932751,LOC103372810 other downstream 1959209 17855631 ~ 17859411 (+)
nmur1a LOC103368681,LOC104952433 other downstream 2750281 18646703 ~ 18665113 (+)
G96418 tsc22d2 other downstream 2886178 18782600 ~ 18785636 (+)

Expression


Co-expression Network