LOC120564964 (LOC102797871,LOC101481459,LOC102301033,LOC106675533,LOC102797273,LOC102300313,LOC102200286)


Basic Information

Item Value
gene id LOC120564964
gene name LOC102797871,LOC101481459,LOC102301033,LOC106675533,LOC102797273,LOC102300313,LOC102200286
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 13379398 ~ 13382747 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039810237.1
GTATGCGGACAACTCCGTCATAGTGAGCCTGCTCCATAAAAATGACAGAGGCCATGGACCAATAATTGAAGACTTTGTCCAGTGGTGTGAGGAGTCACACCTTCAATTGAACATATCAAAAACAAAGGATATGTATATTGATTTCGGTAAAACTCTAGGATATGAGGCCATACCTATAAATGGTCAACTAGTGGATCAAGTAGAATCCTATAGATATCTAGGGACAATTATTGACTCTAAATTAAATTTCCAGGAGAATTGTGAAGCTGTCTGCAAAAAAGTACAACAGCGTCTATACTGCTTGAGAAAATTGTACCATTTTCATATAGACTGTTGTGGTTAGGACAGAATGGACCCAAACGCAGAGCTCAGCACAAGATACTTTATTGGGAAAATGGGAAAGAGGATGGGGAAGTGGGAAGGTGGATGCCAGGGAGGAGAGCACGGGCACGGGGGCTGGAGCTGggaacagagacacagagagactggGGCTGAGAGATCGACAGGGGAAGCACTAAAGCGCGGAATGGCGAGAGCTGGGGAAGGCTGGTGCAGGAACCGTGAGGGAGGGACTGGATGGAGGGGCCAGCTGACTGGAGGCTGGGTGACGGGAAAGGTAGCAACTGAAACAAGAAGACAAAAAACAGGTTACAAAAGCACAggcaggaacacacacaggctaGTATCTAGGAGCTTGAGGTATATGTCACCAATGAGACAGGAGCAACGATTAAGCGAAGATGGTGAGTCAAACCGGGGTTGATATACTGGGCTTGATTGAAGTTGATGACCGGCAGGTGTGTACGGCGGGAGGAGTGGTAGTGAGGAGGCGAGCAGGTGTGTGCAATCAGCTGGCTGGCACAggcaggaggggaggggggaaacagagagagacagagaggcagagccaACACAAACTGACAGCAAAATATATAAGagggaaaaaattaaaaacagacacTCACAGCCAGCCGGACTCCAACCATCACATAGACAAGACCACGATGACATTATTTTATCATGCGTTTATCGAATCCATCATATCTTTTTCCTTAGCGTCATGGTTTGGGTGTGTTTCAGTTAAGCACAAGAATCGCCTAAATCAAATTGTAAGATGGTCAAGTAAGCTGACTGGTTGCTATGGTTTCTGGTGCTGCCCTTGCCTTGCCTGCACAGTTTCAGAAAGATTTGGAGAGAACCGTTGTCTCCCATTATGTGACATATGCAGCCCTGCCATATTATCAGCCTTGGGGATACCTCTGTGTGTGGCGCCTCCTGCAGGCCTGTCCCTAAGGGCTGCCATGCGAAATAGATATGGTATCAAGGGTTCTCTCTGTAAGGACATCGCAGTTTCCTGTTTCTGCGGGTGGTGCAACTGGTGTCAGATGCATCGTGAGTTAAGACATCGTGAAAAAACTCCCACTGTCGTCAATGTTACAAACGTGAACGTGCAGCAGCCTGCTCCAATGATGATGACTCCTGTATACCAATATCAGTGAAAACCAAAGCTTGAGAGTATGATGATGAATAACTTTCAGTTTCTTATTTAGAGTCTAATAATTGTTGACTATCGCGTCAAATTATTTTCTGAAGTttctgtttaacccttgtgttgtctttttgtcgaccatgcaactttctgtttttctgggtcaaaatgaaaaaataaattcaactttttcattgtcttttttgacacttttgtcgctttcCCCGATGTATTTGAAGATGTTTCCGAtgtgttgtcactttttttatgtttttgtcac
>XR_005640172.1
GTATGCGGACAACTCCGTCATAGTGAGCCTGCTCCATAAAAATGACAGAGGCCATGGACCAATAATTGAAGACTTTGTCCAGTGGTGTGAGGAGTCACACCTTCAATTGAACATATCAAAAACAAAGGATATGTATATTGATTTCGGTAAAACTCTAGGATATGAGGCCATACCTATAAATGGTCAACTAGTGGATCAAGTAGAATCCTATAGATATCTAGGGACAATTATTGACTCTAAATTAAATTTCCAGGAGAATTGTGAAGCTGTCTGCAAAAAAGTACAACAGCGTCTATACTGCTTGAGAAAATTGTACCATTTTCATATAGACTGTTGTGGTTAGGACAGAATGGACCCAAACGCAGAGCTCAGCACAAGATACTTTATTGGGAAAATGGGAAAGAGGATGGGGAAGTGGGAAGGTGGATGCCAGGGAGGAGAGCACGGGCACGGGGGCTGGAGCTGggaacagagacacagagagactggGGCTGAGAGATCGACAGGGGAAGCACTAAAGCGCGGAATGGCGAGAGCTGGGGAAGGCTGGTGCAGGAACCGTGAGGGAGGGACTGGATGGAGGGGCCAGCTGACTGGAGGCTGGGTGACGGGAAAGGTAGCAACTGAAACAAGAAGACAAAAAACAGGTTACAAAAGCACAggcaggaacacacacaggctaGTATCTAGGAGCTTGAGGTATATGTCACCAATGAGACAGGAGCAACGATTAAGCGAAGATGGTGAGTCAAACCGGGGTTGATATACTGGGCTTGATTGAAGTTGATGACCGGCAGGTGTGTACGGCGGGAGGAGTGGTAGTGAGGAGGCGAGCAGGTGTGTGCAATCAGCTGGCTGGCACAggcaggaggggaggggggaaacagagagagacagagaggcagagccaACACAAACTGACAGCAAAATATATAAGagggaaaaaattaaaaacagacacTCACAGCCAGCCGGACTCCAACCATCACATAGACAAGACCACGATGACATTATTTTATCATGCGTTTATCGAATCCATCATATCTTTTTCCTTAGCGTCATGGTTTGGGTGTGTTTCAGTTAAGCACAAGAATCGCCTAAATCAAATTGTAAGATGGTCAAGTAAGCTGACTGGTGAGTCCCAGCGGCACCCCGCAGTCCCGTATGCTAAACAACTACAGCGGATAGCTATGGCCATCTTAGAAGATACACCCTTTGAATCTGGAATTCCAGTATCTCCCCTCTGGACGGAGGCTAATAGTCCCTGGTTGTAGAACTACAAGatttaaaaactgttttgtcCCAGCAGCAATCACTCTGTTAAACAAACTGTAGAATTACTTGCACACAACGCACAAGCACCTTGGTCATAGCTGTAGAATTTCTGCATATAACTGCACAAGTCAATGTGGTCATGTACTGTTTTTTATCCATGTTCTACTGtctgttttatatgttttaatgttttgtatgttgcaTGTTATGTGGTGGTTCAATGTTTTAAGGATGTCCTGCCTCTTAGACTGTAAACCTAGTTTACCTACGGGTACCAATAAagtaacctgaacctgaacctgctTTGTTCCATTACAATCTGACATTAGCCTACTGCTAACTAATAAGTAGCTGCATGTTAACGGCTGATAGCTGTATAATTTCTCCCCAATGTTGGGTGAcattactgctgggacatgtccggttgtgtaatggttggtttagaagcctttatttgtggtacaaagtcctgctatatactccgtTACAGTAGCTCCAGCTGCAACTAGTAAAACAAAAGCGGAGCGGAGATTCCAGGAAACACAGTGGGcgatcagagcagactgggctttctCGGGatgggggcttaaagagacaggcgctccaacAGTGCATCTCAGACAGAGGGGAATACAGGAGCCGCAGTCATGGGCAGTATGAGTTGCTATGGTTTCTGGTGCTGCCCTTGCCTTGCCTGCACAGTTTCAGAAAGATTTGGAGAGAACCGTTGTCTCCCATTATGTGACATATGCAGCCCTGCCATATTATCAGCCTTGGGGATACCTCTGTGTGTGGCGCCTCCTGCAGGCCTGTCCCTAAGGGCTGCCATGCGAAATAGATATGGTATCAAGGGTTCTCTCTGTAAGGACATCGCAGTTTCCTGTTTCTGCGGGTGGTGCAACTGGTGTCAGATGCATCGTGAGTTAAGACATCGTGAAAAAACTCCCACTGTCGTCAATGTTACAAACGTGAACGTGCAGCAGCCTGCTCCAATGATGATGACTCCTGTATACCAATATCAGTGAAAACCAAAGCTTGAGAGTATGATGATGAATAACTTTCAGTTTCTTATTTAGAGTCTAATAATTGTTGACTATCGCGTCAAATTATTTTCTGAAGTttctgtttaacccttgtgttgtctttttgtcgaccatgcaactttctgtttttctgggtcaaaatgaaaaaataaattcaactttttcattgtcttttttgacacttttgtcgctttcCCCGATGTATTTGAAGATGTTTCCGAtgtgttgtcactttttttatgtttttgt

Function

NR:

description
PREDICTED: cornifelin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039810237.1 False 1769 mRNA 0.45 3 13379398 13382747
XR_005640172.1 True 2567 transcript 0.45 3 13379398 13382744

Neighbor

gene id symbol gene type direction distance location
LOC120565922 NA coding upstream 10391 13367294 ~ 13369007 (+)
LOC120565910 NA coding upstream 20273 13356372 ~ 13359125 (+)
LOC120565057 NA coding upstream 44300 13328617 ~ 13335098 (+)
LOC120565891 NA coding upstream 58701 13317776 ~ 13320697 (+)
ttc22 ttc22 coding upstream 74164 13293866 ~ 13305234 (+)
insl5a LOC104957723,LOC104925860,LOC103372744 coding downstream 30614 13413361 ~ 13415999 (+)
swt1 LOC102799620 coding downstream 413347 13796094 ~ 13820008 (+)
hmcn1 hmcn1 coding downstream 474287 13857034 ~ 13947979 (+)
ptgs2b ptgs2 coding downstream 612748 13995495 ~ 13999954 (+)
pdcb pdc,LOC104921827,LOC102780712 coding downstream 642008 14024755 ~ 14028859 (+)
LOC120564967 NA non-coding upstream 3730 13372444 ~ 13375668 (+)
G95040 NA non-coding upstream 232603 13146305 ~ 13146795 (+)
G95027 jak1,LOC102785183 non-coding upstream 267078 13107689 ~ 13112320 (+)
G95002 NA non-coding upstream 383744 12995235 ~ 12995654 (+)
G94997 NA non-coding upstream 513147 12865912 ~ 12866251 (+)
G95114 NA non-coding downstream 17083 13399830 ~ 13400932 (+)
G95139 NA non-coding downstream 104289 13487036 ~ 13487366 (+)
G95148 NA non-coding downstream 127446 13510193 ~ 13514065 (+)
LOC120565805 NA non-coding downstream 321620 13704367 ~ 13747072 (+)
G95173 ivns1abp non-coding downstream 440106 13822853 ~ 13825269 (+)
LOC120565776 NA other upstream 37300 13335734 ~ 13342098 (+)
G95046 NA other upstream 159026 13173025 ~ 13220372 (+)
raver2 raver2 other upstream 278953 13005568 ~ 13100445 (+)
ror1 ror1 other upstream 513556 12742805 ~ 12865842 (+)
lrp8 LOC103355569 other upstream 936318 12161638 ~ 12443080 (+)
LOC120564965 LOC102299696 other downstream 8076 13390823 ~ 13399744 (+)
G95460 NA other downstream 1236611 14619358 ~ 14621413 (+)
LOC120565380 NA other downstream 1306635 14689382 ~ 14704353 (+)
dennd1b NA other downstream 1427621 14810368 ~ 14923845 (+)
LOC120564959 LOC104946909,LOC103360792,LOC102294988,LOC101486556,LOC102197099 other downstream 2141182 15523929 ~ 15632812 (+)

Expression


Co-expression Network