zgc:153738 (iqca1)


Basic Information

Item Value
gene id zgc:153738
gene name iqca1
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 21242345 ~ 21250161 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039810296.1
AAAAGCTGACCTCATGTTTGATACACTGTATCCTAATGTTAGTTTAGTTTTACCCTTTGTAAGTTGTTGGTTATTTGATAATAAACAGTGAAACCCGTATTTATTTCCCTGGAGGCAGAGCCATGTCGCAAAGGACATACAACCAGCTGTGGACAGATGCTCAGTTAGAGTTGGGCCGTCTGCTAACGGAGGAACTGCCTACTGTGCCCCCTCGCCCAGAAAAGGACAGGGTAGTGTTCTTCCAGCGTCTGGCCATGCTTTATGTGCGCTACATCCAGATCTTCAGACAGCTGGAGAAGGTCTATGACCAGGTGGTCCACCCTCAGAAAAGAAGAGTTATTCGAGCGATTCTTGATGGCGTGATGGGGAGGGTGTTAGAGCTAAAGAATGAAATGGTGGAGAAAGAGTTTTCAGAGTACCACTACATGGATGATGTCCTTCATGATTTGAAGCTTACACCTGTAGACCTTGAGATCCCTATCCCTCGCTATTTCATCAGTGATCGCAGCAAAGAATTTCAAGAACGAAAGACGATGCTGACAGATATTCTTAAATTGGTGGAGGTTACTGAAAGCCCAGAACCTCTAATGACCAAGGGCATGAGTCAAGAGGAGGCCATTAAGATCCTTCAAGTGGTGGAGAGGGCCCGCCAAGGACGTCTGAGGGCCAAGCTGAATGAAGAGAGCAGAAATATGAACAGGATGTATAAGACCAAGGACCCTGGAACAGCTGCCATTGAGTTGGCCACAGTCTGCATTCAGAAGGTGTGGAGGGGCTACATACAGAGGAAGAGGGCAAAGATTGCTCGGGACGAAGAAATGATTTTTCTGGGAATGGCCATGGATCCAAAATACCAGTTGCCATGCCCTGCAGAAATCACTGCCCAGACTAGTGAAGCTTGTACACGGAGTAAGCAGGTGGAGCACAACGAAGACTATCAGAAGTCTGTAGTGGCTGTCACAAACCAACTACGTGATGTAGAGGGTCATGACATGAGCAAAACCATGAAAGACCAAATCCGACAATGGTTTATTGAATGCCGTGATGCTACAGGATCGTTTCCAGACTACCCAGATGAAGAGGACGGAGGCTCAGCCCTCATTTTTGCTGAAAAGAACCCTCAGCAGTTAATGGAAGAAATTGCTgcaaaggaagaggaggattccaacaacaaaccaaaagggaaggaggagaagaaggaaaagGGGAAAAAGGACAAGGGGAAGGATGATGAGGAAGAAGAGGAGGCAGGGTTGAAGATGCTACCTTCGGCTTTTCTGTCAGACTTGGAAGTAGGAAACAAAACCTTTGTAGATTTTTGGCAAACCCGCAATGAGTCTAGAAACTTCAACCAGAGGCACGAGGTGGAGCTGATCAAGGAAGAAAATAGGAAAGTCATTGAGGCAGAGATTCGAGTACAGGTAGATGAGCAGATGAGACAAGAGCTGGCTGAATGGAAGCTAGCTGTGGATAAAGACAAGGGTGGTAAAACCAAGGGAAATGCCAAGaaaaagaaaggatCTAAGAgtgggaagaagaagaaaaaggacaaAGATTTGACAGCCGATAGGACTCTTGAGTCTCTGTGTCAGGAGCTGGTGGAACAGGGCTTGTTGAAACAGGCAAATAATGTTAGGCTGCAGGATTACATGGGTGACTATAGCTACCTTGGGACCACACTGAGGCAAAATGACATTGAGCCCATGCCATCATTGTCAGATGTGCGGCAGGTCTTATCTCTATATGCAATTTTACCATTAGGCTCACAGGTGGTACATGAGAAAGCTCCTCTGATAAAGGCCATCCTGCTGGCAGGGCCGGCTGGTGTAGGTAAGAAGATGTTGGTCCACGCAATCTGCCAGGAGACAGGAGCCAACCTGTTCGATCTGTCTCCTCTGAACACTGCAGGAAAGTACCCAGGCAAGAGTGGCCTCGCCATGATGCTTCACATGGTGTTTAAGGTTGCAAGATTGCTGCAACCTTCGGTAATATGGATTGAGGACGCAGAAAAAATGTTCTACAAGAAAGTTCCCAAGGAAGAAAAAGAGTTAGATCCCAAACGCTTGAAGAAAGACTTGCCCAAGTCTCTCAAGTTGATCAAAGGGGAGGATCGTGTTCTGATCGTAGGAACCACCAAAGACCCACTAAGTGCTGATATCAAGTCACTGTGTAAAATGTACAGCAAAATCATCCTCATCCCAAGACCTGACTACGGCTCAAGATACATCTTGTGGAAGCAACTGATCAGAAAGCATGGTGGTGAAGTAACCAGGGCGCTGGACGTCAGCTCTCTTGCGAAGATTTCTGATGGCTACACGCCAGGTCACGTCGTCCGGGTGATCCAGAGCGTTGTCACCAAGCGTCGCATCCTACAGCAGGCAAACAGACCACTGACTGCTGCCGAGTTTGTTGCTCCATTAGCCAAGATTGACCCCGTGTttcaggaagaagaagaggccCTTAAAAACTGGTATGCGAAGACCCCCCTGGGAAAGAAGAGGATTAAAGCTGCCACaggaaaggaagaagaagaggcacCAGTTAAAGGCAAAGATgcaaagaaagggaaaaaatgaGTTTGTCGTCATGTTTTTATCACAACTGAATGTCGTTAGATATTTATTAAAGCTTGTATGTGAATTGCCTTCTGATGACTGACCCATTTACTTCCTAcaaagtaaattaaaaaaagcagtaattttgtttttgttgtgtgttttcaaaTGGGGCTGCCAAGTACGTATTTGACAGTGGTGGAAGTAAGTAAGTcatgcattcaaaatcttacaGAAGTACATAAGTATtagtataaaaatatattttttggcc

Function

symbol description
iqca1 Predicted to enable ATP binding activity. Orthologous to human IQCA1 (IQ motif containing with AAA domain 1).

NR:

description
IQ and AAA domain-containing protein 1

GO: NA

KEGG:

id description
K24837 IQCA, DRC11; IQ and AAA domain-containing protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039810296.1 True 2829 mRNA 0.46 19 21242345 21250161

Neighbor

gene id symbol gene type direction distance location
mindy4 NA coding upstream 15979 21217731 ~ 21226366 (+)
nexn nexn coding upstream 27160 21202932 ~ 21215185 (+)
tmem47 tmem47,LOC102234870,LOC103464126 coding upstream 53271 21182803 ~ 21189074 (+)
cpox cpox,LOC102782768 coding upstream 85263 21152578 ~ 21157082 (+)
p3h2 p3h2 coding upstream 95935 21079634 ~ 21146410 (+)
obscna LOC102302552,LOC103364793,LOC102212669,LOC108230617 coding downstream 10766 21260927 ~ 21308569 (+)
hnrnpm hnrnpm,LOC100701615,LOC102779678 coding downstream 126271 21376432 ~ 21384204 (+)
timm44 timm44,LOC100710737,LOC102216179,LOC102779393,LOC102311498,LOC101473596 coding downstream 134361 21384522 ~ 21392514 (+)
LOC120565175 NA coding downstream 289066 21539227 ~ 21552254 (+)
tmprss9 tmprss9 coding downstream 309042 21559203 ~ 21571799 (+)
G96906 LOC103364786,LOC104920247 non-coding upstream 68038 21127063 ~ 21174307 (+)
G96898 NA non-coding upstream 180041 21061672 ~ 21062304 (+)
G96871 NA non-coding upstream 233035 21005731 ~ 21009310 (+)
G96782 NA non-coding upstream 461427 20776558 ~ 20780918 (+)
G96777 NA non-coding upstream 492449 20749212 ~ 20749896 (+)
G96963 LOC102235645,LOC103464121,LOC107392658,LOC103138531,LOC103371596,LOC106936986,LOC107100776,LOC101155672 non-coding downstream 60751 21310912 ~ 21314520 (+)
G97009 NA non-coding downstream 117957 21368118 ~ 21456800 (+)
G97011 dmap1 non-coding downstream 122780 21372941 ~ 21373533 (+)
G97064 NA non-coding downstream 408389 21658550 ~ 21676349 (+)
G97096 NA non-coding downstream 493252 21743413 ~ 21744681 (+)
prkacba prkacb other upstream 677521 20548999 ~ 20564824 (+)
G96513 NA other upstream 1710668 19530767 ~ 19531677 (+)
G96418 tsc22d2 other upstream 2456709 18782600 ~ 18785636 (+)
nmur1a LOC103368681,LOC104952433 other upstream 2577232 18646703 ~ 18665113 (+)
nppc nppc,LOC104932751,LOC103372810 other upstream 3382934 17855631 ~ 17859411 (+)
LOC120565275 ctxn1,LOC108166259,LOC106954365,LOC103138526,LOC104947303,LOC105353898 other downstream 161175 21411336 ~ 21441558 (+)
lsm7 lsm7,LOC102793261 other downstream 304733 21554894 ~ 21557731 (+)
G97093 NA other downstream 440736 21690897 ~ 21782000 (+)
G97321 NA other downstream 1033485 22283646 ~ 22287272 (+)
LOC120565764 LOC103367403 other downstream 1235350 22485511 ~ 22491235 (+)

Expression


Co-expression Network