timm44 (timm44,LOC100710737,LOC102216179,LOC102779393,LOC102311498,LOC101473596)


Basic Information

Item Value
gene id timm44
gene name timm44,LOC100710737,LOC102216179,LOC102779393,LOC102311498,LOC101473596
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 21384522 ~ 21392514 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039810555.1
GATATTCTCTGGTGTCAAATGAGCGCTCCAGACCCCCCCCTAGTGGAAATGGAAGGTCAGTCATTACGTTCAAGATGGCGACCCCCTTGTGTCAGTGTTACCAGATATGTGTAAGAAGAGGCTTGGTGGCATTCCCTTCCTCTTACCTGCTACTTCACAACAGACTCAATGTTTACAGGATACGTGGGGTCCTGACATGCTCTTCACCGGTAAGGCATTTGTCAGGGGAGAGAGGTGGTGGCAGAAAAGGTTTCCTGGGGGAGCTTCTGGAAAACATTAAGCAGGAGCTTAACAAGAACAAAGAAATGAAAGACAACATCAAGAAGTTCCGGGAAGAAGCTAAGAAACTGGAGGAGTCCGATGCATTGAAACAAGCTCGAAGGAAATTTAAAACTATAGAGTCTGAAACAGTGAAGACCTCCGATGTTCTGAGGAAGAAGTTGGGAACCATCTCTGAGACAGTTAAAGAGGGGCTAGAGGAGGTCAGCCGTACAGATATTGGGAAGAAAATCAAGGATGGAATGGAGGAAGCAGCCAAAACAGCGAAGACCTCAGCAGAGTCCGTCTCTAAAAGTGGAGAGATGTTGGGGAAGACTGGTGCGTTCAGAGCAATATCAAAGGGCATGGAGAGTGTAAAGAAAGACATTGGTGAACTGGGTCACACTGGCCCTTACCGGCCTCCTGCCAGACTCAGGAAGAGGAGTGAGTTCTCCTCCAAGGGGGCAGGGGATGGCAGCAAGGTCTTCGAAGCCAACGAGGAAGCAATGGGTGTGGTGCTCCACAAAGACTCAAAATGGTACCAGCAGTGGAAGGACTTCAAAGACAACAATATGGTCTTTAACAGGTTCTTTGAGATGAAGATGAAGTATGATGAGAGTGACAACGCCCTCATCAGAGCAACTCGTGCTGTCACCGACAAGATGACTGACATCATAGGTGGGCTGTTTTCTAAGACCGAGATGTCTGAAGTACTCACTGAGATTTTGAAGGCGGACCCATCCTTTGACAAAGATTCTTTCCTCAAGCAGTGTGAACGAGATATCATCCCCAATATACTGGAGGCGATGATCAGAGGGGAGCTGGAGATACTGAAGGACTGGTGTTATGAAGCGACATACAGCCAGCTGGCACACCCAATTCAGCAAGGCAAGGCCATGGGACTTCAGTTCCACTCTAAGATCCTGGACATTGACAATATTGATTTGGCCATGGGGAAGATGATGGACCAGGGTCCCGTGCTGATTATAACTTTCCAGGCTCAGTTGGTCATGGTGATCCGAAACACCAAAGGAGACCTGGTGGAGGGAGACCCTCAAAAAGTGCTCCGGATGATGTACGTGTGGGCTCTGTGTCGAGACCAGGAGGAGCTCAACCCATATGCTGCCTGGAGACTACTTGACATCTCCGCCTCTAGCACCGAGCAGATCCTCTAAGACTCTTTGATCCGCACAaaagcaacaaacaaacaaaaaaaacaagcactCAGAGAGAGAACAT
>XM_039810556.1
GGTAAATCGCACGGAGAGATATTCTCTGGTGTCAAATGAGCGCTCCAGACCCCCCCCTAGTGGAAATGGAAGGTCAGTCATTACGTTCAAGATGGCGACCCCCTTGTGTCAGTGTTACCAGATATGTGTAAGAAGAGGCTTGGTGGCATTCCCTTCCTCTTACCTGCTACTTCACAACAGACTCAATGTTTACAGGATACGTGGGGTCCTGACATGCTCTTCACCGGTGCCTCGGTCACCTCTTCTGCAGGTAAGGCATTTGTCAGGGGAGAGAGGTGGTGGCAGAAAAGGTTTCCTGGGGGAGCTTCTGGAAAACATTAAGCAGGAGCTTAACAAGAACAAAGAAATGAAAGACAACATCAAGAAGTTCCGGGAAGAAGCTAAGAAACTGGAGGAGTCCGATGCATTGAAACAAGCTCGAAGGAAATTTAAAACTATAGAGTCTGAAACAGTGAAGACCTCCGATGTTCTGAGGAAGAAGTTGGGAACCATCTCTGAGACAGTTAAAGAGGGGCTAGAGGAGGTCAGCCGTACAGATATTGGGAAGAAAATCAAGGATGGAATGGAGGAAGCAGCCAAAACAGCGAAGACCTCAGCAGAGTCCGTCTCTAAAAGTGGAGAGATGTTGGGGAAGACTGGTGCGTTCAGAGCAATATCAAAGGGCATGGAGAGTGTAAAGAAAGACATTGGTGAACTGGGTCACACTGGCCCTTACCGGCCTCCTGCCAGACTCAGGAAGAGGAGTGAGTTCTCCTCCAAGGGGGCAGGGGATGGCAGCAAGGTCTTCGAAGCCAACGAGGAAGCAATGGGTGTGGTGCTCCACAAAGACTCAAAATGGTACCAGCAGTGGAAGGACTTCAAAGACAACAATATGGTCTTTAACAGGTTCTTTGAGATGAAGATGAAGTATGATGAGAGTGACAACGCCCTCATCAGAGCAACTCGTGCTGTCACCGACAAGATGACTGACATCATAGGTGGGCTGTTTTCTAAGACCGAGATGTCTGAAGTACTCACTGAGATTTTGAAGGCGGACCCATCCTTTGACAAAGATTCTTTCCTCAAGCAGTGTGAACGAGATATCATCCCCAATATACTGGAGGCGATGATCAGAGGGGAGCTGGAGATACTGAAGGACTGGTGTTATGAAGCGACATACAGCCAGCTGGCACACCCAATTCAGCAAGGCAAGGCCATGGGACTTCAGTTCCACTCTAAGATCCTGGACATTGACAATATTGATTTGGCCATGGGGAAGATGATGGACCAGGGTCCCGTGCTGATTATAACTTTCCAGGCTCAGTTGGTCATGGTGATCCGAAACACCAAAGGAGACCTGGTGGAGGGAGACCCTCAAAAAGTGCTCCGGATGATGTACGTGTGGGCTCTGTGTCGAGACCAGGAGGAGCTCAACCCATATGCTGCCTGGAGACTACTTGACATCTCCGCCTCTAGCACCGAGCAGATCCTCTAAGACTCTTTGATCCGCACAaaagcaacaaacaaacaaaaaaaacaagcactCAGAGAGAGAACAT

Function

symbol description
timm44 Predicted to enable chaperone binding activity. Predicted to be involved in protein import into mitochondrial matrix. Predicted to act upstream of or within protein transport. Predicted to be located in membrane and mitochondrion. Predicted to be active in mitochondrial inner membrane. Orthologous to human TIMM44 (translocase of inner mitochondrial membrane 44).

NR:

description
mitochondrial import inner membrane translocase subunit TIM44

GO:

id name namespace
GO:0006886 intracellular protein transport biological_process
GO:0071806 protein transmembrane transport biological_process
GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity molecular_function

KEGG:

id description
K17804 TIM44; mitochondrial import inner membrane translocase subunit TIM44

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039810555.1 False 1497 mRNA 0.48 13 21384539 21392514
XM_039810556.1 True 1538 mRNA 0.49 13 21384522 21392514

Neighbor

gene id symbol gene type direction distance location
hnrnpm hnrnpm,LOC100701615,LOC102779678 coding upstream 318 21376432 ~ 21384204 (+)
obscna LOC102302552,LOC103364793,LOC102212669,LOC108230617 coding upstream 75953 21260927 ~ 21308569 (+)
zgc:153738 iqca1 coding upstream 134361 21242345 ~ 21250161 (+)
mindy4 NA coding upstream 158156 21217731 ~ 21226366 (+)
nexn nexn coding upstream 169337 21202932 ~ 21215185 (+)
LOC120565175 NA coding downstream 146713 21539227 ~ 21552254 (+)
tmprss9 tmprss9 coding downstream 166689 21559203 ~ 21571799 (+)
enc3 LOC103373679,LOC103393865,LOC104920233,LOC107100952,LOC100702697,LOC102237431 coding downstream 184880 21577394 ~ 21592150 (+)
s1pr4 s1pr4,LOC102777112,LOC100705658,LOC107100766 coding downstream 458528 21851042 ~ 21853412 (+)
ncln ncln,LOC102776228 coding downstream 502956 21895470 ~ 21909198 (+)
G97011 dmap1 non-coding upstream 10989 21372941 ~ 21373533 (+)
G96963 LOC102235645,LOC103464121,LOC107392658,LOC103138531,LOC103371596,LOC106936986,LOC107100776,LOC101155672 non-coding upstream 70002 21310912 ~ 21314520 (+)
G96906 LOC103364786,LOC104920247 non-coding upstream 210215 21127063 ~ 21174307 (+)
G96898 NA non-coding upstream 322218 21061672 ~ 21062304 (+)
G96871 NA non-coding upstream 375212 21005731 ~ 21009310 (+)
G97064 NA non-coding downstream 266036 21658550 ~ 21676349 (+)
G97096 NA non-coding downstream 350899 21743413 ~ 21744681 (+)
G97170 cope non-coding downstream 548591 21941105 ~ 21944561 (+)
G97181 NA non-coding downstream 604899 21997413 ~ 21997743 (+)
LOC120565815 NA non-coding downstream 613261 22005775 ~ 22007353 (+)
prkacba prkacb other upstream 819698 20548999 ~ 20564824 (+)
G96513 NA other upstream 1852845 19530767 ~ 19531677 (+)
G96418 tsc22d2 other upstream 2598886 18782600 ~ 18785636 (+)
nmur1a LOC103368681,LOC104952433 other upstream 2719409 18646703 ~ 18665113 (+)
nppc nppc,LOC104932751,LOC103372810 other upstream 3525111 17855631 ~ 17859411 (+)
LOC120565275 ctxn1,LOC108166259,LOC106954365,LOC103138526,LOC104947303,LOC105353898 other downstream 18822 21411336 ~ 21441558 (+)
lsm7 lsm7,LOC102793261 other downstream 162380 21554894 ~ 21557731 (+)
G97093 NA other downstream 298383 21690897 ~ 21782000 (+)
G97321 NA other downstream 891132 22283646 ~ 22287272 (+)
LOC120565764 LOC103367403 other downstream 1092997 22485511 ~ 22491235 (+)

Expression


Co-expression Network