LOC120565156


Basic Information

Item Value
gene id LOC120565156
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 18715754 ~ 18733910 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039810616.1
gaagtgacatCATGCAGGAACTCACAGTGCACCTATAATGTTGCTTCAGCAGAACAACTCAATCTCATCGAGCAGACTgctaacatttttgttttgtaatcTGAGGTACATGTCATGAAAAAGGATTAAAAGACTGAAAATGACAGATGTAAAGGCCGCTGAGCTCATCTTCATTTGTTTCATGCTGCTTCAAGGTTTTGTGGCATCATTGAACTGCACCAGCCCAACTCCTGAATCCTTGGTTGATGCCCTTGAGAATAATGTATTCCCTAAAAAACTAGTGCGACCTGTAAAAAGCTTTTCAAGTCCAGTTAACATGACCATTGGTATCACTGTGGTGGGAATTATAGGAGTGGATGAAAAATCCCAAATCCTAACAACATTCTTATGGCAAATTCTGGAGTGGAACATAGAGGGACTGAGCTGGGATGAGGAGGAATGTGGAACTACAAGAGTCTCTGTTCCTCGAGAACAACTTTGGGTCCCAGACATCAACATCGCAGAGTAcatggATGAAGACAAAGCTCCCAAAACTCCCTATGTCTACTTATACAACACAGGTCATGTATTTGATGTTAAGTCACTCAGAGTGGTCAGCTCCTGCCGATTAGTAATCTACACTTTTCCCTTTGATATCCAAAACTGCTCTCTGACATTTGGACCATATCTACACTTTGCTACGGACATAAGGATGATTCAAGGCCTCACGTCTGAAGAGATCCTAAAGGAGTCCCAAGATGTGTTGCAGACCAATGGGGAGTGGGAGCTCGCAGGTATCAGTGTAGCTCCTTCTACCTTGACGTTACATGGGGGAAGCTACTCTGAGATCAAATACTATATCATTCTGAGACGTAGGCCAGTGCTCTATGTGGTGAACCTGCTGATCCCCAGCTGCTTCCTCATCACAGTGGACCTCTTCAGCTTCCTGCTGCCTCCCCAGACTGTGGACCGCTCCTCCTTCAAGATGACCCTCATCCTGGGCTACACCGTCTTCCTGCTCATCATGAACGACCTGCTGCCTGTCACTGAAGAGACAACACCTCTCATCAACGTTTTCTTCTCCATCAGCCTCGCTCTGATGGTGGGCAGCCTGTTGGAGACGGTGTTGATCACTAATATCCAGTGCAGCTCCAGCCAGTACAGTGCGGTGCCTCGCTGGCTCAGTGTCCTCGTGCTACGATATCTGGCTGTTGTCGTTTTTCTCCCTCGAAAGAAAAAGAGCAACCAAATCACTGTCTTCCTCAACCCATCTCTTAGagTAAAGAATTCCAGCAAAACCGACATCTCAGCGATTCATCTTCAGCCCGTCTTTGGTGATACACCTCCAGTGAAACCCCCCCCAGAGCCGGCCCTGGATGAACTGAGGAAGCTGAGCAGAGATCTCCTGGCCATACGCCTCCAGGTAGACAAACACTTCCAGGGGAGTGAAACCTCGCAGGAATGGCAAATGATCGGGATAGTGATCGACCGTCTGCTGTTTGGCTTGTACATTGTCTTCATCGCTGTCAGCTTCATCACCATCATATGTCTCTGGAGCAAACATTATGCAGCATGATTTAACCACAGGGTTATACGCATGATTGACATATCAGCAGATTATATGCTGTATTCTGAGATGTGGCACATGTTGATAACTCTGTTGATAACTCTGTTATCAACATGTGGAATACACAGGATACAATGTAAGTTTCTGGATCTTGAGAGTTGTATTTGTCAAAGATTTGAAGAACATGGATTTTCATATATACAGATGACGTTTTAGATTTACATGCCTTCATTTCTCCTTGCATTGACTACTGTCTGCCACCAACCAAAATTGTGGTGAAAGTTGCTAAACAAATGTTTTAAACCCTTGTGTTGGCTTCCCGTCAATCATGcaaagttttgtttttctgggtcaaaatttgaaataaaaacttttttcccCAA
>XM_039810617.1
gcttgctctgttttgtttggtatttacttTGAACATCAACAGAAGTGACATCAATCTCATTGAGCAGACTgctaacatttttgttttgtcatctGAGGCACATGTCATGAAAAAGGATTAAACGACTGAAAATGACAGATGTAAAGCCCAATGAGATCATCTTCATTTGTTTCATGCTGCTTCAAGGTTTTGTGGCATCATTGAACTGCACCAGCCCAACTCCTGAATCCTTGGTTGATGCCCTTGAGAATAATGTATTCCCTAAAAAACTAGTGCGACCTGTAAAAAGCTTTTCAAGTCCAGTTAACATGACCATTGGTATCACTGTGGTGGGAATTATAGGAGTGGATGAAAAATCCCAAATCCTAACAACATTCTTATGGCAAATTCTGGAGTGGAACATAGAGGGACTGAGCTGGGATGAGGAGGAATGTGGAACTACAAGAGTCTCTGTTCCTCGAGAACAACTTTGGGTCCCAGACATCAACATCGCAGAGTAcatggATGAAGACAAAGCTCCCAAAACTCCCTATGTCTACTTATACAACACAGGTCATGTATTTGATGTTAAGTCACTCAGAGTGGTCAGCTCCTGCCGATTAGTAATCTACACTTTTCCCTTTGATATCCAAAACTGCTCTCTGACATTTGGACCATATCTACACTTTGCTACGGACATAAGGATGATTCAAGGCCTCACGTCTGAAGAGATCCTAAAGGAGTCCCAAGATGTGTTGCAGACCAATGGGGAGTGGGAGCTCGCAGGTATCAGTGTAGCTCCTTCTACCTTGACGTTACATGGGGGAAGCTACTCTGAGATCAAATACTATATCATTCTGAGACGTAGGCCAGTGCTCTATGTGGTGAACCTGCTGATCCCCAGCTGCTTCCTCATCACAGTGGACCTCTTCAGCTTCCTGCTGCCTCCCCAGACTGTGGACCGCTCCTCCTTCAAGATGACCCTCATCCTGGGCTACACCGTCTTCCTGCTCATCATGAACGACCTGCTGCCTGTCACTGAAGAGACAACACCTCTCATCAACGTTTTCTTCTCCATCAGCCTCGCTCTGATGGTGGGCAGCCTGTTGGAGACGGTGTTGATCACTAATATCCAGTGCAGCTCCAGCCAGTACAGTGCGGTGCCTCGCTGGCTCAGTGTCCTCGTGCTACGATATCTGGCTGTTGTCGTTTTTCTCCCTCGAAAGAAAAAGAGCAACCAAATCACTGTCTTCCTCAACCCATCTCTTAGagTAAAGAATTCCAGCAAAACCGACATCTCAGCGATTCATCTTCAGCCCGTCTTTGGTGATACACCTCCAGTGAAACCCCCCCCAGAGCCGGCCCTGGATGAACTGAGGAAGCTGAGCAGAGATCTCCTGGCCATACGCCTCCAGGTAGACAAACACTTCCAGGGGAGTGAAACCTCGCAGGAATGGCAAATGATCGGGATAGTGATCGACCGTCTGCTGTTTGGCTTGTACATTGTCTTCATCGCTGTCAGCTTCATCACCATCATATGTCTCTGGAGCAAACATTATGCAGCATGATTTAACCACAGGGTTATACGCATGATTGACATATCAGCAGATTATATGCTGTATTCTGAGATGTGGCACATGTTGATAACTCTGTTGATAACTCTGTTATCAACATGTGGAATACACAGGATACAATGTAAGTTTCTGGATCTTGAGAGTTGTATTTGTCAAAGATTTGAAGAACATGGATTTTCATATATACAGATGACGTTTTAGATTTACATGCCTTCATTTCTCCTTGCATTGACTACTGTCTGCCACCAACCAAAATTGTGGTGAAAGTTGCTAAACAAATGTTTTAAACCCTTGTGTTGGCTTCCCGTCAATCATGcaaagttttgtttttctgggtcaaaatttgaaataaaaacttttttcccCAA
>XM_039810618.1
AAAGCCCAATGAGATCATCTTCATTTGTTTCATGCTGCTTCAAGGTAAGGTTTTGTGGCATCATTGAACTGCACCAGCCCAACTCCTGAATCCTTGGTTGATGCCCTTGAGAATAATGTATTCCCTAAAAAACTAGTGCGACCTGTAAAAAGCTTTTCAAGTCCAGTTAACATGACCATTGGTATCACTGTGGTGGGAATTATAGGAGTGGATGAAAAATCCCAAATCCTAACAACATTCTTATGGCAAATTCTGGAGTGGAACATAGAGGGACTGAGCTGGGATGAGGAGGAATGTGGAACTACAAGAGTCTCTGTTCCTCGAGAACAACTTTGGGTCCCAGACATCAACATCGCAGAGTAcatggATGAAGACAAAGCTCCCAAAACTCCCTATGTCTACTTATACAACACAGGTCATGTATTTGATGTTAAGTCACTCAGAGTGGTCAGCTCCTGCCGATTAGTAATCTACACTTTTCCCTTTGATATCCAAAACTGCTCTCTGACATTTGGACCATATCTACACTTTGCTACGGACATAAGGATGATTCAAGGCCTCACGTCTGAAGAGATCCTAAAGGAGTCCCAAGATGTGTTGCAGACCAATGGGGAGTGGGAGCTCGCAGGTATCAGTGTAGCTCCTTCTACCTTGACGTTACATGGGGGAAGCTACTCTGAGATCAAATACTATATCATTCTGAGACGTAGGCCAGTGCTCTATGTGGTGAACCTGCTGATCCCCAGCTGCTTCCTCATCACAGTGGACCTCTTCAGCTTCCTGCTGCCTCCCCAGACTGTGGACCGCTCCTCCTTCAAGATGACCCTCATCCTGGGCTACACCGTCTTCCTGCTCATCATGAACGACCTGCTGCCTGTCACTGAAGAGACAACACCTCTCATCAACGTTTTCTTCTCCATCAGCCTCGCTCTGATGGTGGGCAGCCTGTTGGAGACGGTGTTGATCACTAATATCCAGTGCAGCTCCAGCCAGTACAGTGCGGTGCCTCGCTGGCTCAGTGTCCTCGTGCTACGATATCTGGCTGTTGTCGTTTTTCTCCCTCGAAAGAAAAAGAGCAACCAAATCACTGTCTTCCTCAACCCATCTCTTAGagTAAAGAATTCCAGCAAAACCGACATCTCAGCGATTCATCTTCAGCCCGTCTTTGGTGATACACCTCCAGTGAAACCCCCCCCAGAGCCGGCCCTGGATGAACTGAGGAAGCTGAGCAGAGATCTCCTGGCCATACGCCTCCAGGTAGACAAACACTTCCAGGGGAGTGAAACCTCGCAGGAATGGCAAATGATCGGGATAGTGATCGACCGTCTGCTGTTTGGCTTGTACATTGTCTTCATCGCTGTCAGCTTCATCACCATCATATGTCTCTGGAGCAAACATTATGCAGCATGATTTAACCACAGGGTTATACGCATGATTGACATATCAGCAGATTATATGCTGTATTCTGAGATGTGGCACATGTTGATAACTCTGTTGATAACTCTGTTATCAACATGTGGAATACACAGGATACAATGTAAGTTTCTGGATCTTGAGAGTTGTATTTGTCAAAGATTTGAAGAACATGGATTTTCATATATACAGATGACGTTTTAGATTTACATGCCTTCATTTCTCCTTGCATTGACTACTGTCTGCCACCAACCAAAATTGTGGTGAAAGTTGCTAAACAAATGTTTTAAACCCTTGTGTTGGCTTCCCGTCAATCATGcaaagttttgtttttctgggtcaaaatttgaaataaaaacttttttcccCAA
>XM_039810620.1
CATGCTGCTTCAAGGTAAGGTTTTGTGGCATCATTGAACTGCACCAGCCCAACTCCTGAATCCTTGGTTGATGCCCTTGAGAATAATGTATTCCCTAAAAAACTAGTGCGACCTGTAAAAAGCTTTTCAAGTCCAGTTAACATGACCATTGGTATCACTGTGGTGGGAATTATAGGAGTGGATGAAAAATCCCAAATCCTAACAACATTCTTATGGCAAATTCTGGAGTGGAACATAGAGGGACTGAGCTGGGATGAGGAGGAATGTGGAACTACAAGAGTCTCTGTTCCTCGAGAACAACTTTGGGTCCCAGACATCAACATCGCAGAGTAcatggATGAAGACAAAGCTCCCAAAACTCCCTATGTCTACTTATACAACACAGGTCATGTATTTGATGTTAAGTCACTCAGAGTGGTCAGCTCCTGCCGATTAGTAATCTACACTTTTCCCTTTGATATCCAAAACTGCTCTCTGACATTTGGACCATATCTACACTTTGCTACGGACATAAGGATGATTCAAGGCCTCACGTCTGAAGAGATCCTAAAGGAGTCCCAAGATGTGTTGCAGACCAATGGGGAGTGGGAGCTCGCAGGTATCAGTGTAGCTCCTTCTACCTTGACGTTACATGGGGGAAGCTACTCTGAGATCAAATACTATATCATTCTGAGACGTAGGCCAGTGCTCTATGTGGTGAACCTGCTGATCCCCAGCTGCTTCCTCATCACAGTGGACCTCTTCAGCTTCCTGCTGCCTCCCCAGACTGTGGACCGCTCCTCCTTCAAGATGACCCTCATCCTGGGCTACACCGTCTTCCTGCTCATCATGAACGACCTGCTGCCTGTCACTGAAGAGACAACACCTCTCATCAACGTTTTCTTCTCCATCAGCCTCGCTCTGATGGTGGGCAGCCTGTTGGAGACGGTGTTGATCACTAATATCCAGTGCAGCTCCAGCCAGTACAGTGCGGTGCCTCGCTGGCTCAGTGTCCTCGTGCTACGATATCTGGCTGTTGTCGTTTTTCTCCCTCGAAAGAAAAAGAGCAACCAAATCACTGTCTTCCTCAACCCATCTCTTAGagTAAAGAATTCCAGCAAAACCGACATCTCAGCGATTCATCTTCAGCCCGTCTTTGGTGATACACCTCCAGTGAAACCCCCCCCAGAGCCGGCCCTGGATGAACTGAGGAAGCTGAGCAGAGATCTCCTGGCCATACGCCTCCAGGTAGACAAACACTTCCAGGGGAGTGAAACCTCGCAGGAATGGCAAATGATCGGGATAGTGATCGACCGTCTGCTGTTTGGCTTGTACATTGTCTTCATCGCTGTCAGCTTCATCACCATCATATGTCTCTGGAGCAAACATTATGCAGCATGATTTAACCACAGGGTTATACGCATGATTGACATATCAGCAGATTATATGCTGTATTCTGAGATGTGGCACATGTTGATAACTCTGTTGATAACTCTGTTATCAACATGTGGAATACACAGGATACAATGTAAGTTTCTGGATCTTGAGAGTTGTATTTGTCAAAGATTTGAAGAACATGGATTTTCATATATACAGATGACGTTTTAGATTTACATGCCTTCATTTCTCCTTGCATTGACTACTGTCTGCCACCAACCAAAATTGTGGTGAAAGTTGCTAAACAAATGTTTTAAACCCTTGTGTTGGCTTCCCGTCAATCATGcaaagttttgtttttctgggtcaaaatttgaaataaaaacttttttcccCAA

Function

GO: NA

KEGG:

id description
ko04610 Complement and coagulation cascades
ko05150 Staphylococcus aureus infection

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039810616.1 True 1929 mRNA 0.45 9 18715754 18733910
XM_039810617.1 False 1921 mRNA 0.45 9 18717299 18733910
XM_039810618.1 False 1784 mRNA 0.45 9 18717441 18733910
XM_039810620.1 False 1754 mRNA 0.45 9 18715934 18733910

Neighbor

gene id symbol gene type direction distance location
LOC120565635 LOC103364550,LOC102304031,LOC101475589 coding upstream 3289 18701894 ~ 18712465 (+)
LOC120565634 NA coding upstream 14387 18689219 ~ 18701367 (+)
LOC120565951 NA coding upstream 30006 18684198 ~ 18685748 (+)
LOC120565952 NA coding upstream 32357 18682070 ~ 18683397 (+)
mfsd8l1 mfsd8 coding upstream 774019 17928603 ~ 17941735 (+)
LOC120566166 pfn2,LOC102788235,LOC101065608 coding downstream 114327 18848237 ~ 18857894 (+)
LOC120565637 ankub1 coding downstream 177977 18911887 ~ 18917474 (+)
ppp1r2 ppp1r2 coding downstream 186228 18920138 ~ 18945814 (+)
LOC120565155 acap2 coding downstream 216290 18950200 ~ 19004281 (+)
htr2b htr2b coding downstream 310100 19044010 ~ 19051968 (+)
G96372 NA non-coding upstream 55873 18659642 ~ 18659881 (+)
G96361 NA non-coding upstream 94412 18619558 ~ 18621342 (+)
G96353 NA non-coding upstream 102494 18613029 ~ 18613260 (+)
G96341 NA non-coding upstream 128789 18586628 ~ 18586965 (+)
G96273 NA non-coding upstream 823356 17891652 ~ 17892398 (+)
G96398 NA non-coding downstream 10606 18744516 ~ 18744857 (+)
G96399 NA non-coding downstream 15210 18749120 ~ 18751861 (+)
G96417 NA non-coding downstream 48284 18782194 ~ 18859921 (+)
G96438 psmd1,LOC107550672,LOC106613492 non-coding downstream 290373 19024283 ~ 19029464 (+)
G96445 psmd1 non-coding downstream 322431 19056341 ~ 19057812 (+)
nmur1a LOC103368681,LOC104952433 other upstream 50641 18646703 ~ 18665113 (+)
nppc nppc,LOC104932751,LOC103372810 other upstream 856343 17855631 ~ 17859411 (+)
kdm4b kdm4b,LOC104945107,LOC108234360,LOC108412081 other upstream 2339305 16320494 ~ 16376449 (+)
kcnn1b LOC104945110,LOC103355562 other upstream 2414754 16289823 ~ 16301000 (+)
LOC120564959 LOC104946909,LOC103360792,LOC102294988,LOC101486556,LOC102197099 other upstream 3082942 15523929 ~ 15632812 (+)
G96418 tsc22d2 other downstream 48690 18782600 ~ 18785636 (+)
G96513 NA other downstream 796857 19530767 ~ 19531677 (+)
prkacba prkacb other downstream 1815089 20548999 ~ 20564824 (+)
LOC120565275 ctxn1,LOC108166259,LOC106954365,LOC103138526,LOC104947303,LOC105353898 other downstream 2677426 21411336 ~ 21441558 (+)
lsm7 lsm7,LOC102793261 other downstream 2820984 21554894 ~ 21557731 (+)

Expression


Co-expression Network