gamt (gamt,LOC102782137)


Basic Information

Item Value
gene id gamt
gene name gamt,LOC102782137
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 15771293 ~ 15775561 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039810903.1
TAGCTAGTGAAACTCCAACGGTGTCAGCACTTCTGAGCCCGATATAAACCGCCGCCTGCTGCCTTTCGCCCCCTCTTCTGTGTGTAGACACAGTCTACCAAACCGTTCACCAGAACTAAACAACCACCACTGCCTTCCTCCATACCAAAACAAAATGAGCACCGCTGCTCAGCCCATATTCAGCAAGGGAGAGAACTGCAAGGCCTCCTGGCACGACGCTAGCGCCGGGTACAATGAGACGGACACACACCTGGAGATCATGGGCAAACCCGTGATGGAACGCTGGGAGACCCCGTACATGCACTCACTGTCGACCGTTGCAGCCTCAAAAGGCGGTCGGGTTCTGGAGATCGGTTTTGGCATGGCCATTGCCGCCACTAAGGTTGAGTCTTTCCCCATCGAGGAGCACTGGATCATTGAGTGCAACGACGGTGTCTTTGCCAGACTGGAGAATTGGGCCAAGTCTCAGCCACATAAGGTCGTCCCTCTGAAGGGCCTTTGGGAGAACGTTGTTCCCACACTTCCAGATAACCACTTTGATGGTATCCTGTATGACACATACCCTTTGTCAGAAGAGACATGGCACACTCACCAGTTCGACTTCATTAAGggTCACGCTCACAGGATGTTGAAGTCTGGCGGGGTCCTCACCTACTGCAACCTGACCTCCTGGGGCGAGCTACTCAAGACCAAATACGACAACATTGAGAAGATGTTTGAGGAGACCCAGGTGCCTCATCTGCTCCAAGCCGGCTTCAAGAGGGAGAAGATTAGCACCACCACCATGGACATTGCACCACCCACCGAATGCAAATACTATTCCTTCAATAAGATGATCACTCCCACCATCGTCAAGGAGTAAAGTTTCAAGATGCTGCTGCAaccttttttcttaatttttttaacgGTAATGTGCCTTTTCATCTGACCATCCTGACCTCCTCACTCTGTTTATTTCAAGGTCTGCAATAATTCAATAAACTCAAGTCCATCCCAACTCAGA

Function

symbol description
gamt Predicted to enable guanidinoacetate N-methyltransferase activity. Predicted to be involved in creatine biosynthetic process. Predicted to act upstream of or within methylation. Predicted to be active in cytoplasm and nucleus. Is expressed in several structures, including digestive system; eye; heart; pleuroperitoneal region; and yolk. Human ortholog(s) of this gene implicated in amino acid metabolic disorder and guanidinoacetate methyltransferase deficiency. Orthologous to human GAMT (guanidinoacetate N-methyltransferase).

NR:

description
guanidinoacetate N-methyltransferase

GO:

id name namespace
GO:0032259 methylation biological_process
GO:0030731 guanidinoacetate N-methyltransferase activity molecular_function

KEGG:

id description
K00542 GAMT; guanidinoacetate N-methyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039810903.1 True 1003 mRNA 0.51 6 15771293 15775561

Neighbor

gene id symbol gene type direction distance location
LOC120564991 NA coding upstream 48087 15720189 ~ 15723206 (+)
LOC120564879 NA coding upstream 248888 15513151 ~ 15522405 (+)
LOC120565844 NA coding upstream 259018 15506857 ~ 15512275 (+)
mpv17l2 NA coding upstream 266072 15498026 ~ 15505221 (+)
LOC120566177 jund,LOC104930914,LOC103360786,LOC101484003 coding upstream 298530 15470647 ~ 15472763 (+)
LOC120564897 NA coding downstream 113015 15888576 ~ 15896422 (+)
LOC120565334 LOC104959369 coding downstream 214989 15990550 ~ 15994166 (+)
tmem38a tmem38a coding downstream 247016 16022577 ~ 16031978 (+)
LOC120565290 comp coding downstream 259151 16034712 ~ 16047921 (+)
il12rb1 NA coding downstream 313185 16088746 ~ 16101551 (+)
G95806 NA non-coding upstream 4283 15766763 ~ 15767010 (+)
G95804 NA non-coding upstream 19203 15748410 ~ 15752090 (+)
G95799 LOC103355525,LOC105938313,LOC101465035,LOC103143843,LOC106944932,LOC103463346,LOC106922741,LOC102200744 non-coding upstream 32858 15735952 ~ 15738435 (+)
LOC120565654 NA non-coding upstream 89532 15676410 ~ 15681761 (+)
G95735 NA non-coding upstream 125249 15639752 ~ 15646044 (+)
G95814 ndufs7 non-coding downstream 4304 15779865 ~ 15785647 (+)
G95830 NA non-coding downstream 38977 15814538 ~ 15821366 (+)
G95844 NA non-coding downstream 120116 15895677 ~ 15896005 (+)
G95853 apba3,LOC104946396,LOC105938289,LOC107096970,LOC103395862,LOC107392810,LOC103143878 non-coding downstream 155467 15931028 ~ 15934580 (+)
G95873 NA non-coding downstream 197620 15973181 ~ 15974350 (+)
LOC120564959 LOC104946909,LOC103360792,LOC102294988,LOC101486556,LOC102197099 other upstream 138481 15523929 ~ 15632812 (+)
dennd1b NA other upstream 847448 14810368 ~ 14923845 (+)
LOC120565380 NA other upstream 1066940 14689382 ~ 14704353 (+)
G95460 NA other upstream 1149880 14619358 ~ 14621413 (+)
LOC120564965 LOC102299696 other upstream 2371549 13390823 ~ 13399744 (+)
kcnn1b LOC104945110,LOC103355562 other downstream 514262 16289823 ~ 16301000 (+)
kdm4b kdm4b,LOC104945107,LOC108234360,LOC108412081 other downstream 544933 16320494 ~ 16376449 (+)
nppc nppc,LOC104932751,LOC103372810 other downstream 2080070 17855631 ~ 17859411 (+)
nmur1a LOC103368681,LOC104952433 other downstream 2871142 18646703 ~ 18665113 (+)
G96418 tsc22d2 other downstream 3007039 18782600 ~ 18785636 (+)

Expression


Co-expression Network