LOC120565437 (LOC104954941,LOC104939024,LOC103367594,LOC105940182,LOC103463144)


Basic Information

Item Value
gene id LOC120565437
gene name LOC104954941,LOC104939024,LOC103367594,LOC105940182,LOC103463144
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 2845744 ~ 2859118 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039811246.1
gatggtgatggagggaggaggaagaggaggaagacgcGGGGGCTGATGGGtttctgatgatgatgatgctgtgaGTCAGACAGCGGAGGCTTCAGGATGTCCACAGCCGCTCCAGAGTAACAATCCCCGGACACACAGAGACGGACGACCCGCTTGCGGAGACACGCACACAGGTCAGTTATCCAGAGCAGCAGGCGGACTCCAACTCCCAGAATGCCCGAGCAGAGTAACGACTACCGGGTGGTGGTGTTCGGAGCCGGTGGCGTCGGGAAGAGCTCGCTGGTCCTTCGGTTCGTCAAAGGCACCTTCAGAGACACCTACATCCCCACTGTGGAGGACACGTACAGACAGGTGATCAGCTGTGATAAGAGCGTCTGCACGCTGCAGATCACCGACACCACAGGAAGTCACCAGTTTCCCGCCATGCAGCGCCTCTCCATCTCCAAAGGCCACGCCTTCATCCTGGTCTTCTCCATCACCAGCCGCCAATCACTGGAGGAGCTCAAACCCATATACCAACAGGTGCTGGCCATCAAAGGTACCGTGGAGTCCATTCCCATCATGCTTGTGGGCAACAAGAGTGACGAGACGGCCCAGCGCGAGGTGGAGGCGAAGGAGGCCGAGGCTCAGGCAACCGCCTGGAAGTGTGCCTTCATGGAGACGTCGGCCAAGACCAACTCCAACGTGAAGGAACTGTTCCAGGAGCTGCTGTCCCTGGAGAAGAAACGGGACATGAGCCTGAGCATCGACGGCAAGCGCTCGGGAAAACAGAAACGAGCCGACAAGCTGAAGGGGAAGTGCAGCATCATGTAGAGcgagcggcggcggcggcggcggcggcggagTCGCTGTTGAGATGTGGAACAGCAGAGGctggaagggaggggggggtctGCTGATAAACTCCAGTAGAGACTCCCCCTCCCGCAGATGCGTCTTGGGTGGCTCTCCTCCGTCTGTCTGAACACTGAAGCCCAGAGGAACAAAATGACGAGACCGACTGATAATGGATTTATACCAGAGCCTCGGGGCGCCTCCTGGCCCTGAACTGGATTGTGTTTGTGGTCCCAAAATACTtttaataaacacatacaccCCCATTTAACTGCTACCGCCATAAAACTAATATTATGAGAAAGGAATACTCCACTGATTTTATTCTGAATCCTGAGCCAAAGCCATGAATGTAACTTAGATAGATAGAACTTTATTTATCCAAATAGAAAATAGTGTGCCGCAGTTGCAGAATAAAACGTGCTCAAGCTCTGATTTGTTTCAGCAGCTCCTACAATTCCCAGGATTTGTAGCAAACACTGAGATGTAGTTAAAGTTCTGCACGGGTCTGAAGCTGAGACTCAAGCAGAGCTTGAGACCCTGACACGTACCATAAGTTCTAGGtcattttatttaatctgtTACTAAACGTTAGGCTGAAAGACTAACGCAACACATTAGGTACACTATTGTCTGTCACAGTGGGCATTGCCTACTTGCAACCCAACCTTGGCAAAGTCAGAAAAAAGATAAATTAGAAGATACGTGAACCCAGCCAGAGACCTGAGCTTTACCTAAACAAAATGGGCCAAAACCAACTAGTCAGGTTCAGGTTGGACAGAGCTCTACAGACTCCTCGATTTCAGGTTGACAGAAGGGATTGTCGTTAGCAGGTTGCTAACGAGAGTATAAATCCATTCAAGAGAAGTACAGAGTTGCTAACTTTAGCTTAACATCTGATAGCAACAAGGCTTTTTCAATCGTTAACCTGTAACCCCTGAAAAGAATGGAACTAGCTAATGATATACTAACTCTTGGCCTTTGATACATTAATTACCTACATTATAGTAAAGCTAGTTAGCTGGACCTGCTAAGGTAACAGCTTAAATTAAAGCAGAGCATCCAATCCTTAAACTTTTTACTCTTGTGATTTTGGGAAGACTAAAATGAGTCACCATCCTCCAAACTTGCTATGCTAAGACTGGACAATCATGGGGTTTACTGAATTAGCAGCAGTTCGAACATCAACGCAAAGAAAACATTGTTTGAATTACTAAACGTTATGCTAATATACTAGCCACTTAGTCGCCTTGCTACCAAGCATACTTAAGCTTCACAGCCTTCACATGTGACTTGGCTGCCCCCTGGTGGAGGAGGGgagcatttgtttttaataaaggtTTTGCATTTCTGCGACCACAtcttgtgattggctgcctCGTGACTCTCCACCATGTATTGATCATAAAGGCAGCCGTTAAACAGTTTCAGATGAAGCTGAAAAACAGTGGAGTATTCCTTTATCTAAAAAGATGAGTGACATTTCCATTATGATCGGTTCTTGGTGGCTGATCGTAAACAACAGGacgtctacacacacactaccggtCTTTACGTCCACATAACACAGAGCCGACAGACAACGGCAGTAAACGTCAAAAGGCTTTCCAAGATTCTCACACACGCCTTTCCATCGGTCAGACTCACCGGACACAACATCCATTTGCATTGACAAGTAGccgctgagcagcagcagaTGAACGAATAATTTACAGGTATATGAGTTAAAGGAACATTGCAACATTTTCGGGAACCATCTCCAGAGTCAGGGGTTTTCAGTTTCATTGCTGTGTCCAGTGCAGAGAGActtgtttagcctagcttagcataaagactggaagcggggggaaactgctagcctagctcCATCAAATGTTACATGTTGGCATTTAAGCCTGAATTGAAAAGgcagtattaaaaaaaactaaaaacattcaTTTCCAAATTACAGAAGCCTTGAAAGGCATGGCGATATAAAAAATTGATATAAAAAAGTTTATCTTTTAGATAGGGGATAATATCTCCTACGTACGACCTAAACCTTAAAGGGCGAGAAAGTTGTACAGAAGAACGATTAGTGCACGAAACAAAAAGGGAATTTAAAGTTCAGCCAAATGCAGCATTAACAAAAGGTTTTACATTCTTAGTCAACTACAAATATCTTCTATAAAACATGATGGAACTGTGCACCCCCGCCGACGTGGGTTTTACTGCGTTTGGTAGTTAACGCTGTAATCACTTGgaagcgatatttaaaatgtaaatttcacAGTTCTCTGGTGTACCTTAGCACTAAATGCAGTCTAACTGGAATTATGTTGAGCCAAGCCATTACGCAGATCAGCGGGTTAGCTTTTGTGCAAATAGgaattaattattttctcagATTTAGCAAGTTCAAGCATTATTCGTTTGCATTTTGGAAGATGGAATACAGAAATGTCCTTGccacccacacaccccccccccaccccaacgcAAGGAGCTGCGTCGAACAACCAAAGTGCAATACAACATTTGTAACAGGCCAATACTTATAAACCTGTTCAACAGGCATAAACCTGTAGTAAACTTTATTTCAATCTGACCCCTCTCTGCAAATTGCTAAAACGAAAGTGGTCTGTATGTAGTCTTTAGTTTAGCAAAGTCTCAGCTGCTTGCTGAGCCTCTTTCTCTCTACTAGCGGTCCACATGGCTAATTCATATTCACGACAAGTTATCAGACTACACTTTGAGCTTATACTTTCTACTGCTCCCCCCCCAGCTTCAAGTTGTGTTGTATAGTCTCTCTGCACTGACACCTTCCTCTGCAGAATCAAGACAAGGTTTCTAAATGTTGGACTGTTCCTTTAACTGGCAGGAGAGAGCAGCCACTGTATATTTATAATGCCTTTCCTTCCACTGTACTTGACAGTTTGTTATATTCCCTGAACATAAGTGATCTTAAAACTTTACGAAGCACAAACGCAACAAACTAAAGTCGGAGAGCAGCACGTTCATCCTGCAGAACATCTCCTAGATTATTTACACAGCAGTGAGTCCACGCTGATCACATTTTATGCACTTTTGTGAAATGCTCCATGAGTTTCTTTCCACTGTAAAAAGCTTTCCGACATGTTTTTGTGTTAGCACATCCTCCCTGTTACATCACTCTGGCTTTAGCAATATTAAAATAGCTGCACTTTGTATGTAGAAATGAATAACTTTAACCTGAACTTGTTCATGTAGTTTTCATAAGATCTGGGTACAAATATGATTGAATGAAGGGATTGTTTGACTGGAGAAGTTTGGGTactagactgtaaaaaaaataatgtaggTAGCAACCTTTTAATTTATGTAAATGTTATCTCTACATTACAGCCTAAATTgtcttttaaagtttctttGCATCATGTTTGTGTAAACCAAAAGGGACAACACTAAATCATTTTTGTGTATTTGATATTGTCATTAAGTTATTTTTCTAAAGAGTAAACAACATCCGAAACAGCAACGTGTGATCGGATGGTtgttaaaacaaaagaaatctgGCTGAAGGTTGTTTTGGTCTTCTTTACtcctaaaaatgttttttggacATACAGTGCCAGTGACACTCCGTTATGtggcttcacttttgttttGAAGGTAGATGGAAACTTTTCTCATGTGAAGAAAGTGACTGAATAAAAACAGCGCTGTTGTACAGAAAA

Function

NR:

description
PREDICTED: GTP-binding protein Di-Ras1

GO:

id name namespace
GO:0007264 small GTPase mediated signal transduction biological_process
GO:0006184 obsolete GTP catabolic process biological_process
GO:0016020 membrane cellular_component
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function

KEGG:

id description
K07841 DIRAS2; DIRAS family, GTP-binding Ras-like 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039811246.1 True 4529 mRNA 0.44 4 2845744 2859118

Neighbor

gene id symbol gene type direction distance location
LOC120565422 NA coding upstream 4885 2821642 ~ 2840859 (+)
LOC120565421 NA coding upstream 251761 2586515 ~ 2593983 (+)
LOC120565432 NA coding upstream 384147 2450531 ~ 2461597 (+)
LOC120565428 NA coding upstream 418617 2423987 ~ 2427127 (+)
LOC120565427 NA coding upstream 425139 2412231 ~ 2420605 (+)
LOC120565438 gadd45b coding downstream 140502 2999620 ~ 3002539 (+)
LOC120565597 sgta coding downstream 358608 3217726 ~ 3574149 (+)
LOC120565455 patj,LOC104952322 coding downstream 478714 3337832 ~ 3348216 (+)
LOC120566051 NA coding downstream 771066 3630184 ~ 3633365 (+)
LOC120565880 LOC104960898 coding downstream 967745 3826863 ~ 3854810 (+)
G92740 NA non-coding upstream 4542 2840968 ~ 2841202 (+)
G92722 NA non-coding upstream 45711 2775493 ~ 2800033 (+)
G92713 NA non-coding upstream 84387 2761132 ~ 2761357 (+)
G92695 NA non-coding upstream 118672 2726733 ~ 2727072 (+)
G92611 NA non-coding upstream 256675 2588616 ~ 2589069 (+)
G92747 NA non-coding downstream 1874 2860992 ~ 2865958 (+)
G92779 NA non-coding downstream 148578 3007696 ~ 3008065 (+)
G92781 NA non-coding downstream 162398 3021516 ~ 3022209 (+)
G92789 NA non-coding downstream 166974 3026092 ~ 3067077 (+)
G92785 NA non-coding downstream 167411 3026529 ~ 3033061 (+)
G92575 NA other upstream 263373 2533744 ~ 2582371 (+)
reep6 reep6 other upstream 465484 2371988 ~ 2380260 (+)
G92333 NA other upstream 476072 2365899 ~ 2369672 (+)
G92293 NA other upstream 769640 2072182 ~ 2076104 (+)
LOC120565575 NA other upstream 819813 1988808 ~ 2025931 (+)
G92770 NA other downstream 123108 2982226 ~ 2983014 (+)
G92773 NA other downstream 151556 3010674 ~ 3094410 (+)
G92782 LOC103461136,LOC106954349 other downstream 266771 3125889 ~ 3132204 (+)
G92826 NA other downstream 492649 3351767 ~ 3464206 (+)
G92838 NA other downstream 566616 3425734 ~ 3490621 (+)

Expression


Co-expression Network