tut4 (zcchc11)


Basic Information

Item Value
gene id tut4
gene name zcchc11
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 6262220 ~ 6290119 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039811499.1
TGGCGCTCCCACAATGCAGCGGGGTAACGTATTAACATGGCGTCAATGGTTGCTGTTTTGACCAGGGCCGTGGGATTTGAAAAATATTTAGTACAGtatcatggagacagctaaacaataatttggaatCAACTTTAGAGCTCGAATaCTTTAGGTGGCCTGCCTCCCTGGTCATCCTCAGCGTGGTGTTGACTCCACCAGGGACAAGAGCGAGAGGGATGGAGGAGTCCAAAAGTCCAGTGAAATCAGTCAAACAGTCTCAACCCAGAGGAGCCAAACCTTTGTCCAGTGAGAAGTTAAGTAAAGGAGGAGAGGGCACCAAGTCTGCAGCCCGCAGCAAAGACAACCTCACTGCTGCAAAGGATGACCATAATATAGGCAGTCAGGGAAGCCGCGGGCCAGGCAAGACTTTCACAGACGTCCCCCAGGACAAGAGGAGAGGACGGTCCTCCAGGCTGACTAGACTGACTGGAAGAACAAGTTCTGGGGAGCGAGGGAAAGGAAAAGCAACAAGCTCACAACAGAAGCCGGTGGCACAGGCTCCTGACTCCAGGGTGTCTATTTCTCCAGACAACAGCCTCTCAGCAAACCGAGGGACCAGCTCTCGTGTAGTGCCCGGTACACCTGCGAAAGGCCCCACAGAGCCAGCCAAGAGCTCCACTGTAGCTCCTGCAAAGGAAAAGTCTCATGGGGTGAAAGCTGCTGCATTGATGCATCAGTCCGTCAAAGAGGTGAGGcccactgtggaggaagggcCCCTGACAGAGCAACAGCTGGGCCTCCGACAGGCAGAGGAGCGCCTCTACAGAGACTACATCCACCGACTGCTGAAACAGTCCCCTGAGTACCCAAACTATCAGTACTTATGCAAGCTGTGTTCTGTGCACATCGAGAACATTCAAGGAGCCCACAAACACATCAAGGAGAAGAGACACAAGAAGAACATAATGgagaaacaggaggagaatGAGCTGCGTGCCCTGCCGCGCGCCTCCGCTGCCCAGCTGAGGGCCGTGGACGCGGCGGTCCTAGAAACAGCCAGGCAGCACGGCATCTCGGAGGAGGACTTTGAGGTTCGGAAGGCCGTGGTCATCAGGATGGAAGAGATCATAAAGAAGCACCTCTCAGCTTGTGCTCTCCGTCTCTATGGCTCATGTCTAACCCGATTTGCCTTCAAGAAGAGTGATATCAACATTGATGTCACCCACCCCTCCTCAATGACACAACCTGAGGTCTTGATTCAAGTCCTGGAAATCCTTAAGAAGAGCCCCGAATATTCTGAGGTTGAGTCCGATTTTCATGCCAAAGTTCCTGCTGTGTTCTGTCGGGACGTTAGCAACGGCCTGTTGTGTAAAGTGAGTGCTGGTAATGACGTTGCTTGTCTCACCACCAATCACCTGGCAGCCCTCTCTAAACTGGAACCCAGATTGGTCCCGCTGGTGCTGGCCTTTCGCTACTGGGCAAGGCTGTGTCACATTGACTGCCAGGCTGAAGGTGGCATCCCCTCGTACTCCTTCGCCCTCATGGTCATCTTCTTCCTGCAGCAGAGGAAAGAGCCCATCCTCCCCGTCTACCTGGGCCGCTGGATCGAAGGCTTTGATGTGAAACGCGTGGACGAGTATCACCTAACTGGAATCGCTTTGGACATGTTTGTCCGGTGGGAGCGCAGACCTCCGACCTCCACGGAGAACCGAAACGAGGCCAGAGGAGAAGGCAGACCCAAACCAGAGCAGAAAAAGCCCGATGATACTCATTACTCAGAAGGCTTGACCCGCCTAACCTTGAACCTGGGTAAAGATGTGTCGCTGGGCCAGTTGTGGTTGGAGCTTTTACGTTTCTACACACTGGAGTTTGCTCTTGAAGACCACATCATCAGCATCCGCCTAAAGGAGCTCCTCTCTAGGGAAGGCAAGAACTGGCCTCGCCGCAGGCTGGCTATTGAAGatCCCTTTGCCCTGAAGCGAAATGTTGCACGCAGCTTGAACAGCCAAATGGTGTTTGAGTACATCCAGGAGCGCTTCCGTACGGCTTACAAATACTTTGCTTGCCCTCAGAGAAGGGGCACTGGGGGGCGCCGGAGAGGCAAGAAGGCAGAAAAGCAACGTGCAAAATTGAAAAAGGTCGACAAGAAGGAAGAAGACGACGGGACAGGTGAAGGAAGTCCGTGCGCTCCGAGGGGGCACCGGGGGTTTAAGGAGGACGAGGAGCCGGACAGCAAAGATGAAGATGGATCAGATTCGTTCAGAAAGAAGGATGAGAAGACTTTAGACGCCAGCCTCATGGACATGGTTCTCAATGAGGGCAACATACCTTCCTTTTCCCCCAACGGCCTGCTGGACAGTGACAAGGagggggaagaagaagaagaagaagaagaagaagaagaggaggaggaggaggaggaggatgatgatgatgatgaagaagaagaggaagaggaaagaagaagaagaagaagaagagaagaagtggAAAGCAGTGTTTCAGATAAGGACGGACCAGTACCATCAGAGGATCTGCACTATGTGTTTGACAAGATGATTTTCACTGGTGGGAAGCCTCCAACGGTTGTGTGCAGCATCTGCAAGCGAGATGGTCACTTGAAGGACGAGTGTCCTGAAGACTTCAAGAAGATTGAGCTGAAGCCTCTGCCTCCGATGAACGACCGCTTCAGAGATATCCTTGATGGGCTCTGCAGATTGTGCTACTTTGAATTGTCACCTACACATGCTGAGCAGCAGAAGAGGGAGCAGATCCTCTGCAGCCTGGAGAGGTTCATAAGGAAGGAGTACAACGATAAAGCTCAGCTCTGCTTGTTTGGCTCTTCCAAGAATGGCTTCGGCTTCCGAGACAGTGACCTTGACATCTGCATGACTCTGGAGGGCCATGAGACTGCAGAGAGGCTGAACTGCAAAGAGATCATTGAAGGCCTTGCAAAAGTGCTAAAGAAGCATACAGGTTTGAGGAACATCTTGCCTATCACAACAGCTAAAGTGCCTATTGTGAAGTTTGAACACAGACAGAGTGGTTTAGAGGGAGATATTAGCCTTTATAACACGCTGGCTCAACACAACACCAGAATGCTGGCTACGTATGCAGCCCTGGATCCACGCGTGCAATTTCTGGGATACACGATGAAGGTCTTTGCTAAGCGCTGCGACATTGGGGATGCGTCCAGAGGAAGCCTCTCATCGTATGCTTACATCCTCATGGTGCTTTACTTCCTGCAGCAGAGGCAGCCGCCAGTCATTCCCGTCCTGCAGGAGATCTTTGATGGGAACACTGTCCCCCAGCGGATGGTAGATGGCTGGAATGCTTTCTTTTGTGATGATCTTGATGATCTGCGTCGGCTTCTCTCAGAGCTGCAGCCGAACACCGAGTCGGTGGGAGAGCTGTGGTTGGGACTCCTGCGCTTCTACACGGAAGAATTTGACTTCAAAGAGCACGTCATCAGCATCCGCCAAAGGAAACGCCTCACCACCTTTGAGAAACAGTGGACCAGTAAATGCATCGCTATTGAAGATCCCTTTGATCTGAATcataatttttatttttttttttttttttttttttttgtaaaaaattttATTATAAAGGCTTTTATAAATGGAAGATTGTTGTTTGATTGGACTCCGTTCTACCCCATCCCAGGCACTGAAGTGGACTACTTCTTTGACTCGAAGGTGTTGACCGACGGCGAGTTGGCGCCCAACGACAGGTGCTGCCGGATCTGCGGGAAGATCGGGCATTACATGAAGGACTGTCCAAAGAGACGCAGGATGAAGAAGAAGGAAAACGACAAAGACGAGGACGTTAAAGAGGAGGATCGGGAGCCGAAGGACAGACGTTGTTTCCAGTGTGGGGACATGGGTCACGTACGGAGGGACTGTCCTGAGTACCGCCACCTCAAACAGAGGACCGCCGGAGCACCAGCTCCTCACATGGTACGAACTATGGTGAGCTCCCAGTCCATCCCCATTCCCCAGACCGCTACAGACTGTCCCGGACGGACCAGACAGCCCTCTGAATGTTCCGACAGTCGGCAGACTCCGCCCTACTCCCCGCAGCCTGCAGCTGTCCCTCAGAGTTCCTCCCAGTCCtccagttcccctcagccctCCCACATTAAGACCAGCTCCGCGGGTCCCCCAAAGCAACCAGTTCACCCCCAGGTCCCCCTGTCTCTCTTCAGCTTCCCTCCAGGCCAGTACCACCCAGGGGCGCTCACCGCACTGGGGCTTCTTCCATCTCACCAGTCCCAGGGGCAGCCTCACCACCCGGTCCACATCCCTTCCACCTCCTGGCCCATACACGGACCAGTCCTCACTACGTCCTCTCCCAACGCCCCCTCCCCGCCCGGCCTGAAATTTGCCCTGCGTTCGGCGTCGGGGAACGGGAGTCCCACAGGCTCAGGGGGCAGCCCCAGCCCCATGAACCTGAACGACCCCAGCATCATCTTCGCCCAGCCGGCGGGGAGACAGATGGGCATCGGGCCGGGTCGGGAAGGACACTGGCACAACCACTTGGCACAACCTGGGTCACTCATGGGCAATGGCACCGTGGTCAAGTCAGAGTCAGGCCACCCGGCCCAGTTTGTAGGCATGAGCCAAGGCTCGCGGTTATGGGAGCACAATAAAACCCCACAGTACGCCCTGTCTCCATCCTGGCCCTACCGGATGCCCCAGAACTTCATCCAGCAAGGCAACGGTCGCTACCAGCCTGGCAAACCCTTCGTGGGCCCAGGGTCTGTGGTGCATCCGAATCCAAACTTCCCACTGGTCCCCCACGTCCGACATCAAGTCAATCTAAATTTCATCCAACAGAAGAAGTGAACCTGCATCTCTTTTAATTAGATCTATGGTCAGTAACCTAACACAGCAAAATTATGTACTCTTTGCATCATTTGATCACAAggattttttaaaaatgaatttgTTTCTCATGTTTGtacagtttttatgtttttatttcctgTCTCATTACATTGATTTGTGATACAAATGTCAAATATTTTAATACCCCCATTTTTGAGGGGgtccaaaaaagtgtttttatttcatgtgtaaAGTAAGGAAAAATATaaacctttatttttattagctGTATTCATACTTTGCTTGCCACAAGATGAAGGCTTTGAATAGACGTTTTAAAAACAATCTAACATGTCACCCTAAGTATGTAGTGCCAAAAAAACAGGGTTAGcaagaaaaaa

Function

NR:

description
PREDICTED: terminal uridylyltransferase 4 isoform X2

GO: NA

KEGG:

id description
K13291 TUT; terminal uridylyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039811499.1 True 5215 mRNA 0.52 32 6262220 6290119

Neighbor

gene id symbol gene type direction distance location
LOC120565748 NA coding upstream 190973 6067683 ~ 6071247 (+)
LOC120565642 tspan1,LOC104930558 coding upstream 233027 6002811 ~ 6029193 (+)
mast2 mast2,LOC102294889,LOC102799744 coding upstream 775335 5211170 ~ 5486885 (+)
LOC120566192 NA coding upstream 1060345 5024510 ~ 5201875 (+)
prrx1b prrx1 coding upstream 1261780 4966559 ~ 5000440 (+)
LOC120565762 LOC102311032 coding downstream 45632 6335751 ~ 6345081 (+)
cyldl NA coding downstream 337523 6627642 ~ 6641120 (+)
ghrhrb LOC100710271,LOC101475240,LOC103357300 coding downstream 381952 6672071 ~ 6723277 (+)
si:ch211-191a24.4 LOC104966872 coding downstream 675428 6965547 ~ 6971300 (+)
si:ch211-191a24.3 LOC103358916 coding downstream 717051 7007170 ~ 7067934 (+)
G93644 NA non-coding upstream 20062 6241195 ~ 6242158 (+)
G93640 NA non-coding upstream 46485 6215068 ~ 6215735 (+)
G93609 NA non-coding upstream 297161 5964812 ~ 5965059 (+)
G93541 NA non-coding upstream 601415 5596770 ~ 5660805 (+)
G93437 NA non-coding upstream 769763 5488294 ~ 5492457 (+)
G93700 atpaf1,LOC102780159 non-coding downstream 100037 6390156 ~ 6398997 (+)
G93713 NA non-coding downstream 299084 6589203 ~ 6589653 (+)
G93758 NA non-coding downstream 546472 6836591 ~ 6836818 (+)
G93790 NA non-coding downstream 586032 6876151 ~ 6876493 (+)
G93791 NA non-coding downstream 589684 6879803 ~ 6880081 (+)
G93638 NA other upstream 48203 6202085 ~ 6214017 (+)
G93613 NA other upstream 210700 6035369 ~ 6051520 (+)
trmt1l trmt1l other upstream 1548987 4685224 ~ 4713233 (+)
LOC120565391 NA other upstream 1948705 4284755 ~ 4313515 (+)
G93150 NA other upstream 2044394 4174602 ~ 4217826 (+)
rhpn1 rhpn1 other downstream 64773 6354892 ~ 6381598 (+)
G93938 NA other downstream 1059691 7349810 ~ 7350587 (+)
LOC120565294 pycrl other downstream 1588800 7878919 ~ 7890177 (+)
LOC120565614 NA other downstream 1606026 7896145 ~ 7905247 (+)
G94073 rgs5,LOC107393027,LOC104951458,LOC100708109,LOC105932873 other downstream 1947251 8237370 ~ 8286436 (+)

Expression


Co-expression Network