LOC120565631 (LOC103364917,LOC104953203)


Basic Information

Item Value
gene id LOC120565631
gene name LOC103364917,LOC104953203
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 17370102 ~ 17467510 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039811535.1
CTCCTCCTCGCTGCAGCTTCTTCTGCATCCTCCCTTCATTCTCTCGACTCAGCTACCGCCAGGGTTCCTTAGCTACTTTACTGACGGACTGATAGATCACAGTGGCGAAGAAAAAAACTCTTTGATTAACTTTAAACTTAGTAGAattatacacacaaaaaaacgtcGCTTTTGTGGTTGAATGCTGCGATCACAGACACGACGCGATTGGAATGAGAAAACGCGCAAAAAAGTTTCAAGACGACTAATTAAGgatGCACTTGTTATTGTTTCCAAAAATAGGCCTGCTGGTTTGTTTCCACAGCTATATATCAGCCTTTACACTGGAAACTAGAAAACTGACATATGATGAGTCCTACTATGAGTATGTGCCTGATCGCCTACGGTGGAACGATGCAGGGAAATTGTGTAACCAGCGCTCTGGGGCCTTAGCCACTGTCTCCAACCCAGTGGAGAAGCAAGAGCTAACCAGCTTTTTAACATCTTTAAACATCACTCAGCCTGTGTGGATTGCCAGGAATGTCACGACAAGTTCCTCCGAGACCCTGATTCTGGAGTTCTCCGGGCGCTCAGACAGAAAGCATGCCCGTCTCCTGCACAAGTTTCCCTCCATGGACTCCGTGACAGTTTGCACCCGGCTCCGCCTCGATCCAAATTGTTTCGGAATTTCCACAATCTTTTCTTACTCCATCCAGTCATATATTAATGAGTTCCAGCTCCGCGTGAATCTGATCCAGGGCAAACGTGTGCAGCTGGCTCTGCTGGTCCATGGCATTCATGGACGTTACCAAGAAGCCTTCGACCACGACGACTCCTGGCATTCGGTGTGCATTTCTTGGAACCAGAATGGTGGACGCTGGGCACTATTTACTGACGGCCTTGTGGTCTCTAGGGGTGATGGCCTAGGTTCTAAGAGCATTGGCGCTGATGGTTTTTTCATCATTGGACAAGAGCAGGACACCTTTGGGGGTTCATTTAAGAAGGATGAGTCATTCTCAGGGAGCATCACAGAGCTGCACATATGGGACCGGGTACTGAACAGCAGCGAAATCTACACCATGGAAAAGGAGTGTTCACCAGTTTCCTCGGGGCTGGTGTTCAAGTGGAGTGGAGCAGCCATGGAAATAGAGTCCTCCCTTACGAAGCTATGGAGAGACATCCCATGTCAAGGAAACGTCACTGCGTTAACAAATTTGTTCTTGGATTCCCTCCTGGATGGAAATTCTTTGCAGAATCAAACATTCTCCTTTGAGTTGTTCAACGGCCCTGAGTCTGATGAGGATTGTGGCATCTTTGACCCTGTTATTGGGAGCTGGAGTCTAACCAAGTGTGTCTCATTCAGTGGGGCTGTTTGCCAGTTTAAGAAAGaAGTGCTGGATGATGTCCATTTACCAAAGACACCATTCTTCAGTAGATTGAGCAAGAATCATCTGACCAAACCTATGATGGTGGAGCTGAGCGTTAATGCCTCCGGGGACAGAGCTCTGGCCTTGCAGCAGCTGACCCAGGCTGTTCTGCATGTGGTGGAGGTTGGTGGCCCTGACCTCCTCACCTCCAGTGACATTCTCTACCTCACCCAGATGATTGAGACGGACCTGACTGCACTGGCTAGTTCTCACTCTGCTGGAGCTGGCGCAGCAGAAGTCATGGTGTCCATTGCTACCAACTACGTAAAGGCGGCAAGTTTGATGCTGGAGCCCCACATGGCTACACAGTGGATGGGCCTGACAGAGGATGGGGTCAGCGTGGGACCATTTACTATTGTCCAGAGCATTGACAGTCTTGCTGAAACTCTTGCAGACATGCTATCTGCTGAGAAAAAAGGCTTTACTCTTTCTACCAAGAACATAGATGTGTACATGAAGTGGCAAAAGCTGTCTCAAGTGAGCTGTAGTCAAGTCTTCAAGCCATCTGCAGTCGGCTCTCACAGCGCGAGCAGCAGTGGTCAGGATGAGTTGCTTATACCTGACACTGAGCTCCAGAGAATACACACATTGgGATACGAGGAAGTGATGTTTATTCATACCCATTACAGCCATCTGAGTGAGATAGTGTCTGGAGCACAGGAGCAGCCACTCAGTCACCAAGAGAAAGTGAAAAGAATTCTCCCAGGTCACCTGGCTTCTGTTGTCATATCAGCCACTGTCCGTGATGCCTTCAAGACCCAAACCATCCCTGTGGCTGTCAAGTACACACTTTCTTCATCACACGTGGTGGAGTATTCTCAGCGAGTTACTGCTGTTTGTGCCTTTTGGAATTTCAGCTTGATGCATAATCATACCAGCAGCTGGTCCAGTGATGGGTGCAGGGTGACCTTGACCGGCTCTGGTGTCACTTCCTGTCTATGTAACCACACCACCAACTTTGCAGTGCTGATGAATTACCTGGAGTCGAAGTGGAGTCCTGAGGAGGAGCTTATTTTGACCAAGCTGACATTCATCGGCTCTGGTGCGTCTCTGTGTGCGCTGGTGGTTACCTTGATGCTGTTCACTGTGCTGGACATCCCCAAATCTGACAGGACGTCCATCCATAAGAACTTGTTCATTGCTCTGATCTGCGCCCAGGTGATTCTGCTCTGCAGCGGCTCAGCCATTCACAACAAGGTGGCGTGTACACTTGTGGCGGCACTGCTCCATCTCTTCTTCATGGCAGCATTTAGCTGGATGCTGGTGGAGGGTCTGCTGCTCTGGAGCAAGGTGGTTGCAGTCAACCTAAGCGAGGAGCGTCACATGAAGTATTACTATCTCATCGGCTGGGgtCTGCCAGTATTGATCGTCACCATCACGCTGGCATCAGCCTCAGGCAAATACTCGGCCGACGGCTACTGTTGGCTCAGTGTCCAGAATGGTGTTATCTGGGGCTTTGCTGGGCCcgtcatcttcatcatcatgGTGAATATCTTGGTACTGACCAGGGTGGTAGTCATCACCATCTCCACAGCCAAGAGAAGGTCCATCATGTTGGCCATGGGAACCAGTCCTGTGGAACAAGCCTATGAGCAAATCAGGGCGGCAGTGAAAGCAGTGTTGGTGTTGCTGCCCATCCTTGGATTGACATGGCTATGTGGTGTTTTGGTGCCTTTCTCCATTGTCATGGCCTACACTTCATTTTACATCATTGGCCTGTTCATCTTCCTGATATATGGGGTGTACAACACAGAGGTTCGGAGCACAGTCAACAGGAtcaaggagaggagaaaagccCTTAATTTTTCAAACTGCGCCAGTTCCCGACCATCCAGCTCAGTTACCAGCTCTCGTCCTGTCAGTTTCCCATTAGGAACTACCCAAAGCCAAGAGGAGGAAGCCACCTACACTTGCAACACTCCCGGCCTggggaaggaggaagagaggaccAGAGgtcagctgtccattccttgtgttacAGAGAGACTTGAAAATCCCTTGAGCCAAACCTCCAAAGACACTGGTCTGCATAGGAAGGAGCCTTCTCCTTCAGAGGTGGATGCCTTGCCGGCTGGTTGTAGTCTCCATGTTCCCATGGAGCTGGAGTTTACGGCTTCCTGTTTCCCTCGCAGCCCTGTACCTCAGAAAAGCTATGGCCTCATCTACGTTGACTGACCTGGCTGGTGATGGTGATTGTAGTTTTGTAATAATTTTTTAATCAAGAGTTGGTGAAATGTTTTCtctgtgctttttttctttactcttttcattttcactcaCCTGTCATCACTGTAGAGACGCACGAGTGTTGCATACCGGTTGTAAGTATTTTTTAGTGATCTAAGACTCATTCTGCCTTAACATTGCCTTTATTTTAAGATGTGGCTACATAGTTTTCACTAAaagtttattgtttttctgcatttatatgtttgtatgttttcatGGTTTATTCTCTTGCTGTACATTTGCTTGTGAAAGTATACCTGTATATTGTGCAGTAAAGTGGGCAATGTGTTACATCAACTAAGTAATGGGGCATGTTTGTGATCCATTAGTGTGAGATtctagctgacacttttatcacATGCCATCCACCTTTTCTCCCCCCTGGTTCCATGTCACTACTGTTAAACTATCATATATAGGCCAAAATGGCATAAAAAATAAGATGGACATTTGAGTAATATTGTACAGCATCTCATTTGATTTCTCATCTGATCTCATTCCTACATGTTGATTTACTAAAATGTTATTCGAAGGGATGTTGGAATAGCTGTTAATTTctcccacaaaaacacatgtaATGGAACCAGACAGCGTTAGTGTGTGCAGGAAGCAAGAATCTGGTGTTATAAgcataataattatttattgaaaTATGAGGAAAAATTCAATTGGCCTCAGAGAGACATCCCCAAGACCGTGGTAGCGATAGGAGCAGTCAGAATGTCAGCAGGAGGGGCAAAAGTCATAGACCAATAGCATTTTGATCCATCCTGTAGCCATGTGTTGACAGCGTACATGAGCATGTGAATGCACAAAGGTAGTCATTGTTAAAGCATTTATCCTGCACACAAGTCTGTCTAGACAGTTACTCTTAAGCAACGGATTGGTTTGTTGGAAAGCAAACGGCTGAATTTCAGACCATTTCCTTTAACTTCTGACAGCTGAAGTGACAGAAAACTGTTTCTCCAAACTCTAACTTCTGCAGTGACTGCATTAATGTGCATGACTGTATTTCCTGCATGTGGTACTGTATAGAGTTCACCTGTATGTTATATAGGAAGTCCAAGGCAGCTGCAGAAACCTAAACACAGAATTTGAGAAAGTGGGTGATAATAGATTGTCTGATCAATAGACACAATTAATGAAGGTGTCAGAAAATTGAGTTCTGGACCTGGAACTGCTTAAAGATGTGGGATTTTAAGTGAATTTTCTGTACAATAAACATGCCATTGAAAGAC

Function

NR:

description
PREDICTED: probable G-protein coupled receptor 144

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039811535.1 True 4873 mRNA 0.47 25 17370102 17467510

Neighbor

gene id symbol gene type direction distance location
kif14 kif14 coding upstream 1012 17344165 ~ 17369090 (+)
ddx59 ddx59 coding upstream 26553 17337825 ~ 17343549 (+)
si:zfos-943e10.1 LOC103364910,LOC104945262,LOC104928005 coding upstream 114554 17236374 ~ 17255548 (+)
tbxa2r NA coding upstream 152312 17206770 ~ 17217790 (+)
ptprsa LOC103355422,LOC108234298 coding upstream 192217 16926619 ~ 17177885 (+)
srek1ip1 srek1ip1 coding downstream 281922 17749432 ~ 17753834 (+)
ncl ncl coding downstream 396827 17864337 ~ 17875307 (+)
LOC120566215 NA coding downstream 399038 17866548 ~ 17866681 (+)
LOC120566228 NA coding downstream 401156 17868666 ~ 17868802 (+)
LOC120566229 NA coding downstream 404200 17871710 ~ 17871847 (+)
G96160 LOC100701835,LOC102794991,LOC101468118,LOC101061816 non-coding upstream 109072 17257393 ~ 17261030 (+)
G96088 NA non-coding upstream 492021 16877876 ~ 16878081 (+)
G96086 NA non-coding upstream 597932 16771969 ~ 16772170 (+)
G96076 NA non-coding upstream 693525 16676207 ~ 16676577 (+)
G96075 NA non-coding upstream 776920 16592876 ~ 16593182 (+)
LOC120564955 NA non-coding downstream 153288 17620798 ~ 17636720 (+)
LOC120565502 NA non-coding downstream 203170 17670680 ~ 17699048 (+)
G96273 NA non-coding downstream 424142 17891652 ~ 17892398 (+)
G96341 NA non-coding downstream 1119118 18586628 ~ 18586965 (+)
G96353 NA non-coding downstream 1145519 18613029 ~ 18613260 (+)
kdm4b kdm4b,LOC104945107,LOC108234360,LOC108412081 other upstream 993653 16320494 ~ 16376449 (+)
kcnn1b LOC104945110,LOC103355562 other upstream 1069102 16289823 ~ 16301000 (+)
LOC120564959 LOC104946909,LOC103360792,LOC102294988,LOC101486556,LOC102197099 other upstream 1737290 15523929 ~ 15632812 (+)
dennd1b NA other upstream 2446257 14810368 ~ 14923845 (+)
LOC120565380 NA other upstream 2665749 14689382 ~ 14704353 (+)
nppc nppc,LOC104932751,LOC103372810 other downstream 388121 17855631 ~ 17859411 (+)
nmur1a LOC103368681,LOC104952433 other downstream 1179193 18646703 ~ 18665113 (+)
G96418 tsc22d2 other downstream 1315090 18782600 ~ 18785636 (+)
G96513 NA other downstream 2063257 19530767 ~ 19531677 (+)
prkacba prkacb other downstream 3081489 20548999 ~ 20564824 (+)

Expression


Co-expression Network