LOC120565762 (LOC102311032)


Basic Information

Item Value
gene id LOC120565762
gene name LOC102311032
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 6335751 ~ 6345081 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039811775.1
GGAGGAGGCGTCGTGACTCCTGCAGTTTGTTCATGTGTAATTGTCATCATCACTGGATGTGACAGCCGCGGGGACGCCGGGTCTATACAGTCACAGATTCTTGGCTCCTTCATCCAACATTTACGCGTTTTTAAAAACGGAAGGAAATTCCTGACACGTTTTCCGGAACGTTTCTTTCCTTGGATGACATTGCAGGCGGTTGTACTCTGCCgctgtattgtttttatttcacttttggagaaaaaaaagtcaaagagtGGTCGCACAAAATGCTTTCTTTATTCGCGCGTAAATGCCGCGCCGCCCGTCAAATGAATAGCGCGTTGTGCGTGTTTCGTCAGTGAAAGCTGCATGGGTAAGTTTTCAGAGGCACTGATGTGCTCCTGTCAGACGGAGACTTTTGGCATATGAGGGAAACTGttggattataaaaaaaaacaacaacacaatctGTTGCTTTCAAGCACGACAAGTCTGGAGAGTCTGCTGTTTTTCATTCTGGATTGTTTGCGCCTTGGTGACCGTGCAAATTCAAACCTCCCTGAGGTATTCACATGGtagaaacaatgtttttatgcaACACGAGTGCCATAAAGGACTGGAGCTATTTTCTGTCTCAGATTTTGCCTCTGATGAATAAAACTACAGGCTTGGTAAACATCGACAAAGCAGAGGATGTGACGACCACCATGGTGACAGCTCTGCAGCCGGACGGCGCCATGAGCGCAAGTAACCCGCCGCTCAACTCCAACCATACCTCGGGCATGGAGCACGTCTTTCAGTACTCTTATTCAGAGAGTGACCTGCTGTACACGGACTACCGCACACCTGCACGAGACTCCATCCCGCTGCCCAAAGCGGTTCTCTACCTGGTCATGGCTGcgctggtggtggtggcggtGGCGTATGCGATAGTTGGGCACCTGGTCAAAGATGTGGTAAATGAGTTTGTCGGTGGAGGCAGGTCGATGGTTGCTGAAGGGGACGGTGGTGAAAGCAGTGAACCAGAATGGGTGTTTGGCTCTCGTCGAGTTAGCAGCCGCAACAAGACAGAGATCAACTGCATCAGCAGCAACATGAACGAGATGAGCGAGTTGGGCGAGAGGCCCCGTCTGGTGGAGATGGGCTACATATCCCTGAACCACACTAACTGCCTGAGCTCCGTCAGACCGGAGGAGACAGTGGTCACCATAGACGAGACGTTACAGCAGCGACCTCCGGACACTCCCTCTGGGACTTAACCTGGGACCTTCTCACCTTtaccggagggaaaataaagcAGCGCGTCAGCCTGCTTTTGTTGTGCAAGTGGATTTACAAGTCTGTCATGAATCGAAGCTCTATCCACTCTTTTCTCACCTGTAGGTGGGCTGTAATACCTGCAACTTGGGAGCCAGAAGGGACTTTGAATTGTCGGCCATTGCTGGAACATTAGAAGCATCGGATGCTGATGTTTGTATCTGATTGGACTGCTTTCTGCGGAGGTGACGAGAGTGGACAGCCGCAGCTGTTTTTGGACAAGCAGGCAGAAAACaacaagtgtttttttgttgtcatttttgttcTCATCGTGCTGTCCCTTTTTTCAAGTGACCCCCTTGTGAAAATACCACCCTGTGGTACATGCACTTCACTTTAACCACTAACAGTATGTAATCACTCTAAATATAGGATACACGCCGGTCAATGCTTATTGTAATGTTGCCGCTATAGCACGGTTAAAAACTTCGCCTTCATAAAAACAATCACATCagcaactttttttatttccctggTTGCTGTGAGACACTCAAAGATTTTTTCGTAATTATTGTAAAGTTTATATCAAGCACCTCTAATGACACCGGGAAGGCtacaaatgttcttttttttgttctcacAACCcgttgataaaatgaaatgtattttgtagTTTCATGGTATTAGCTTGACGTGAACGAGCGCTAAATCACCTTTAAGAGCTATGattgcaaaaaacaaaacttaaaaGTATCAAAGccattg

Function

NR:

description
PREDICTED: uncharacterized protein LOC102311032

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039811775.1 True 2004 mRNA 0.47 3 6335751 6345081

Neighbor

gene id symbol gene type direction distance location
tut4 zcchc11 coding upstream 45632 6262220 ~ 6290119 (+)
LOC120565748 NA coding upstream 264504 6067683 ~ 6071247 (+)
LOC120565642 tspan1,LOC104930558 coding upstream 306558 6002811 ~ 6029193 (+)
mast2 mast2,LOC102294889,LOC102799744 coding upstream 848866 5211170 ~ 5486885 (+)
LOC120566192 NA coding upstream 1133876 5024510 ~ 5201875 (+)
cyldl NA coding downstream 282561 6627642 ~ 6641120 (+)
ghrhrb LOC100710271,LOC101475240,LOC103357300 coding downstream 326990 6672071 ~ 6723277 (+)
si:ch211-191a24.4 LOC104966872 coding downstream 620466 6965547 ~ 6971300 (+)
si:ch211-191a24.3 LOC103358916 coding downstream 662089 7007170 ~ 7067934 (+)
igfbp3 LOC103358919 coding downstream 763068 7108149 ~ 7127272 (+)
G93644 NA non-coding upstream 93593 6241195 ~ 6242158 (+)
G93640 NA non-coding upstream 120016 6215068 ~ 6215735 (+)
G93609 NA non-coding upstream 370692 5964812 ~ 5965059 (+)
G93541 NA non-coding upstream 674946 5596770 ~ 5660805 (+)
G93437 NA non-coding upstream 843294 5488294 ~ 5492457 (+)
G93700 atpaf1,LOC102780159 non-coding downstream 45075 6390156 ~ 6398997 (+)
G93713 NA non-coding downstream 244122 6589203 ~ 6589653 (+)
G93758 NA non-coding downstream 491510 6836591 ~ 6836818 (+)
G93790 NA non-coding downstream 531070 6876151 ~ 6876493 (+)
G93791 NA non-coding downstream 534722 6879803 ~ 6880081 (+)
G93638 NA other upstream 121734 6202085 ~ 6214017 (+)
G93613 NA other upstream 284231 6035369 ~ 6051520 (+)
trmt1l trmt1l other upstream 1622518 4685224 ~ 4713233 (+)
LOC120565391 NA other upstream 2022236 4284755 ~ 4313515 (+)
G93150 NA other upstream 2117925 4174602 ~ 4217826 (+)
rhpn1 rhpn1 other downstream 9811 6354892 ~ 6381598 (+)
G93938 NA other downstream 1004729 7349810 ~ 7350587 (+)
LOC120565294 pycrl other downstream 1533838 7878919 ~ 7890177 (+)
LOC120565614 NA other downstream 1551064 7896145 ~ 7905247 (+)
G94073 rgs5,LOC107393027,LOC104951458,LOC100708109,LOC105932873 other downstream 1892289 8237370 ~ 8286436 (+)

Expression


Co-expression Network