LOC120565891


Basic Information

Item Value
gene id LOC120565891
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 13317776 ~ 13320697 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039811998.1
TGTCAATTCGCCCATGCTTGTGGAGAACGGCTGTTAAGTTTTAGCCTCTAACATTAAGTGAAGTTTCAGTTGGTGTTCTTGTGTGTCTGTAACTACAATCCAACATCCGATGGCAGAACAACCCTTGATAGAGTGGAGCAGTGGTCTCTTTGACTGTTTTGAAGATGTGGCGACTTGTTGCTATGGTTTCTGGTGCTGCCCTTGCCTTGCCCTCACAGTTTCAGAAAGATTGGGAGAGAGCCGTTGTCTCCCATTATGTGATATATGCCCTGCCATTTCTGCATATAGTGGGTTACCTCTGTGCGTGCCTCCTGCCGTCCTGTCTCTAAGGGCTGCCATGCGAAACAGATATGGTATCAAGGGTTCTCTCTGTAAGGACATTGCAGCTGCCTGTTTCTGTGGGACGTGCGCCTGGTGTCAGATGCATCGTGAGTTAAAACATCGCAAAAAAACTCCCACCGTCATCGTCATGCAAAATCAAGTCAATGTCCAGCCTGCTCCTGTGATGATGATTCCCGGATACCCGCCCCAAGCTGGTTTTGTGAACCAACCAGGAGTCTTTGAGATGTCATCCTGAGCTCTGtggcttctttttttgtgttgttgtcttCTGAAGGAAATATTATGCAGCTTAGATCCTGctagtgtttgttttgttacacCAAAGACAAAATGTAAGTGTATGTCTATGAGTGAAAACCAAAGTAGTAATCACAGTGATTTGTGTCCCCTTGGCATCAGAGTATGCTGAATCAGTTTCAGtctattaatataaattacatttattgttCCAAATCCCTTAATTTTAAGGATTGTCAAGGATGAAGGAGATAATTGTAGTCCtttaaaatctttatttataattaaagaaataataaagaTGTATTAGGATAGGAACTACAGTACTACTCAGCAACATCACAGTGCAGTTTATCCTAAAGCCCAGCAGAGGGCACTAACGTTATATGAACACAAATTAAGTTGTCCATCCATTGCAATCCTCCTCTTTGGTAAAATAAAACGCTTTGACAACTTATGCTAGTAAAGAACTACTACTAAAGATTTCGGCACTAAAATAgacacaaaatatataaaaagccTCACAAATAggctacatacatacacttatTCTAAGTGATGGATGTGGTAATAAGCATAAACAGCTAGCATCTTAACTATGTACTTAACTTAGCTATGTAGATTTTTACAGTGCAATCTAAAAATGAAGTATATACAGTttctacataaataaatataacagCTACAGTAACTTACTTTGATGGAGTCACACACTGCACAAAAGCAGCAACTCGAAGGAACATCACATCACACTACACACAGAACAAGAACACTGAACATCCCTCAAAGGTGATGGCTTAGATGGttcagacagaaacacaatgtGACAATCAGAGATCATATAGGCCTACCCAGAagcgtaactatcggtaagcagggtacgcGGTTGCTGACGGGCCGGACCAGTCAGGGGCCCGCCAACCTGTGCATTTTCACATtgatgtacgctgtaacgatttttcactataaagtcgc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039811998.1 True 1554 mRNA 0.41 4 13317776 13320697

Neighbor

gene id symbol gene type direction distance location
ttc22 ttc22 coding upstream 12542 13293866 ~ 13305234 (+)
lepr NA coding upstream 59215 13211481 ~ 13258561 (+)
dnajc6 dnajc6,LOC102786137 coding upstream 113407 13163705 ~ 13204369 (+)
ak4 ak4,LOC102785469 coding upstream 159135 13149850 ~ 13158641 (+)
cachd1 cachd1 coding upstream 323012 12896287 ~ 12994764 (+)
LOC120565057 NA coding downstream 7920 13328617 ~ 13335098 (+)
LOC120565910 NA coding downstream 35675 13356372 ~ 13359125 (+)
LOC120565922 NA coding downstream 46597 13367294 ~ 13369007 (+)
insl5a LOC104957723,LOC104925860,LOC103372744 coding downstream 92664 13413361 ~ 13415999 (+)
swt1 LOC102799620 coding downstream 475397 13796094 ~ 13820008 (+)
G95040 NA non-coding upstream 170981 13146305 ~ 13146795 (+)
G95027 jak1,LOC102785183 non-coding upstream 205456 13107689 ~ 13112320 (+)
G95002 NA non-coding upstream 322122 12995235 ~ 12995654 (+)
G94997 NA non-coding upstream 451525 12865912 ~ 12866251 (+)
G94813 NA non-coding upstream 1397739 11916631 ~ 11920037 (+)
LOC120564967 NA non-coding downstream 51747 13372444 ~ 13375668 (+)
G95114 NA non-coding downstream 79133 13399830 ~ 13400932 (+)
G95139 NA non-coding downstream 166339 13487036 ~ 13487366 (+)
G95148 NA non-coding downstream 189496 13510193 ~ 13514065 (+)
LOC120565805 NA non-coding downstream 383670 13704367 ~ 13747072 (+)
G95046 NA other upstream 97404 13173025 ~ 13220372 (+)
raver2 raver2 other upstream 217331 13005568 ~ 13100445 (+)
ror1 ror1 other upstream 451934 12742805 ~ 12865842 (+)
lrp8 LOC103355569 other upstream 874696 12161638 ~ 12443080 (+)
znhit6 znhit6,LOC102790327 other upstream 1495894 11789135 ~ 11821882 (+)
LOC120565776 NA other downstream 15037 13335734 ~ 13342098 (+)
LOC120564964 LOC102797871,LOC101481459,LOC102301033,LOC106675533,LOC102797273,LOC102300313,LOC102200286 other downstream 58701 13379398 ~ 13382747 (+)
LOC120564965 LOC102299696 other downstream 70126 13390823 ~ 13399744 (+)
G95460 NA other downstream 1298661 14619358 ~ 14621413 (+)
LOC120565380 NA other downstream 1368685 14689382 ~ 14704353 (+)

Expression


Co-expression Network