LOC120566178 (LOC103355552)


Basic Information

Item Value
gene id LOC120566178
gene name LOC103355552
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 16209374 ~ 16213553 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039812467.1
AAATCCTTTGCTGCCCGCCCTTGGATCTCCTAGTCTAGTTGATCAAATGCTAATGTGTTGTCTGTACAGTAACAGTTGCAGAGGGGAATCTCATCATGTCTCCCTGACTCTCTGGACTACAATCTCAGCCACAACTGAGCCAGAAACAAACAGGAAGAGCTGGTATTCACTGGGATATCAGTTCCTGCAGGACCTTTTCTTGGATTTTCTTGGAGTGTTTCCTGTTacgcttttttctctttttcctgtTTCATTGGCTTCCTGCCTTAAACGACAGTCGCAATGACTCCAGAGAATCCTAAACTGCAGAGATGTTTGCAAAACCGTCGCTCGACTATCAACTGTCTGTCAAAGGGTGTAGAGGACAACAAAACATTCCCATTTTCTCAGGAGAAAACAGTGAAAGCATGGACATCTCTGGAGTATCTGGAAAGTCCTGACATCAAAGCAGAGGAAAGATCCAAAGAGCCACAGAGAATCAGTGTTAATATTGGTGGGAAAGTGTTTCATATCCCCAATCAGTGTGCCATTAAATATCCTCACACCCGGATAGGTTCATTGGCCCTCTGCAGGGACCGAGCAAAACTCCTCACGCTGTGCGACGATTACTCTGTACGCAAGAAAGAGTTCTTCTTTGACCGTGACCCTGCCTTCTTCCACCACATCTGCCATTTCTACACAAGCGGAGTGCTGTGGGTCACACTGGAAATGTGCCCCATCAACTTCGAGGAGGAGATCAAATACTGGGGCCTGAGCCTGAAGGACACCCAGCGCTGCTGCTGCATAATGTTCGAGGAGAAGGTGGACGAGGTCAAGGACTACCTGAAGGTGGAGAGGGAGCTGTTGGCTGAGATAGAGGTGGAGTATGACGACGAGTTTTTCAAGGACATGGTTTTTGGGAATATGCGTAAGACTCTGTGGGACATTGTGGAAAATCCGTACTCTTCAACTCTAGCGAAGGCTTTCACTGTGCTCTCCAACCTTTTTCTGTTCTTCTCCATCGTCGCAATGAGTCTCAACACTGTTGAGGAACTTGAAGATTATAAAATCAACGGAAAGACATACATGGAATGGGTGGAGATCATCACCATTGTGTTCTTTACCTTTGAATATTTCATTCGCCTTGTAACCACTCCTAACATCACAATGTTTTTGAAGAGTGGACTCAACTTTGTGGACATGGTGGCGGTCATGCCTTATTTCGTCCAGATTATCTTTGAAACCTTTACTGACACTGAGAACTTAAATGCACAGGAAGATCTCAGGACCATGGCGCGGGTCAGCAAGCTCAGCCACGTACTTAAAGTCATCAAACTGCTGCGAATCTTTCGGATTTTGAAGCTGGCTCGACAGTCCACCGGCATGAGAGCGTTTGGGTTTACGCTGCGGCAGTGTTACCAGCAGGCCTCTTGCATTTTACTCTTCATTGTCATGGGAATCTTTACTTTCTCTGCCCTCCTTCATTCGGCCGAGAGGGAAACTGAAGGATCTCCTATCAGCAGTATCCCAGATGCCTGGTGGTGGGCTGCAGTCAGCATCTCCACTGTGGGCTACGGGGATGTGGTTCCTGTAACTGTTGTGGGCCGCATTGTGGCCTTTGGCTGCATCTCATTTGGCATCATCCTCAACGGCATGCCAATCTCTTTCCTCTTTAACAAGTTCTCTGATTACTATGCCAAGCTAAAAGCAGGGGAGTACAACATTAACTCAGTGCAGCGGCGCTTTCAGCTCAAGAAGCGCCTCCGACACAGAATAAGCATGTGTTTACATCACTCAGAGGAAGACAATAGTACAGACAGCCGCTTCGAGTGCCCACACTGAgtaaaacttaaaaacaaaaaaaaagatgggaGTGGTGGTGTTGCTTAGTAAACATAAAAGTTCTCAAGTTTAACACGCGTGACATGTGTTAGATACAGATAAAAAATAATCTGACAGCAAGTGCAAAGAATGTGggtgagaaagagaagaggaagtCAAAGTcatgtttggttgtttttttttgcacagaTGCAGTTTTACTTTCATTTATGACCACCACACTGGTAACGACCCACTCCATCAAACAGATAGTTGAGAACCACAGAAGAAAGATTTGGAGGAACTGATGTTGACTTTAAGCCATTTTATTTGCATGTCAAAAAGTTTCTATTCAAATAACTTAtggtttttaaaaaagaaaaaagaaaaaaggatgaGTGTGAGGAATAGGGCCCCAAATTTGTAATACACACTGACTCTTAACTCAACTTGGCCCTAAAACTTGCAAATTGTAAACGTTGAGTGCCTGTAAATGATAGAAACACTTCACCGAAGTTAATGTTTCAAGTGTTCAGGTGTTAAAACTGTAAACATCTGTATGGTGTACACTCATGTTTCCTATCAATGTCATATATGTTAAGTGATCACTCTTTGTCATATGAATAATTAAAGCATGTCACAAGTTGCAGGGAAtggaggacccaaatgcagagagaaggaggaagttTGTTGCTTGAGGATTTATTTCACCAAAAAAAATGAAGTGCATACCAAAAGAGTCGAGAAAGTAATAGGCAAAAACTAAGTCCAGAACAACAGAACAGGATCTCAAAACTGGAACTCAGAGACAAAAGGTAGACTCCATGCAAAAACACAGCAACAGAATACACAGCAACAGAATACAAAGAACcaacaagagacaaagacagaacagAGACTAAATAGACCAGGTAACAAGgactaacaagggacaggtgacactaggcttgacaacaggtgaaacacataagACAATCACAAGGGTGGGAAactaaagacaggaagtaaaactagacaagacaagggagaaaacagatttccaaataaaacaggaaacagaacataacagAAACTCACAATCATGACAAAGCAGACTGATGAATTGCAATAAATCACTGGTGGGTATGTAACTGTAAACAACTGTCAGTGTGTAAAGACTCTTCATTATTACAGTTCAATACAGATACCAACAGACAAATGTGGAGATGAAACATGACATTTTATGTCAATTTAATATGTATTCCTAATTGTACtactacagtaaataaatactgtgaaagtggctata

Function

NR:

description
PREDICTED: potassium voltage-gated channel subfamily V member 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039812467.1 True 3088 mRNA 0.43 2 16209374 16213553

Neighbor

gene id symbol gene type direction distance location
LOC120565120 NA coding upstream 4629 16174908 ~ 16204745 (+)
ndufa7 ndufa7 coding upstream 35805 16170463 ~ 16173569 (+)
mast3b mast3 coding upstream 43557 16131146 ~ 16165817 (+)
il12rb1 NA coding upstream 107823 16088746 ~ 16101551 (+)
LOC120565290 comp coding upstream 161453 16034712 ~ 16047921 (+)
LOC120565304 b3gnt3 coding downstream 2743 16216296 ~ 16225462 (+)
slc5a5 slc5a5,LOC104958014 coding downstream 43305 16256858 ~ 16275695 (+)
cluap1 cluap1 coding downstream 64492 16278045 ~ 16284985 (+)
ccdc124 ccdc124 coding downstream 72145 16285698 ~ 16288901 (+)
uhrf1 uhrf1,LOC102797162 coding downstream 88370 16301923 ~ 16317498 (+)
G95952 NA non-coding upstream 39530 16166202 ~ 16169844 (+)
G95929 NA non-coding upstream 81434 16070354 ~ 16127940 (+)
G95877 NA non-coding upstream 227876 15980690 ~ 15981498 (+)
G95876 NA non-coding upstream 228748 15979752 ~ 15980626 (+)
G95873 NA non-coding upstream 235024 15973181 ~ 15974350 (+)
G96070 NA non-coding downstream 289592 16503145 ~ 16503811 (+)
G96075 NA non-coding downstream 379323 16592876 ~ 16593182 (+)
G96076 NA non-coding downstream 462654 16676207 ~ 16676577 (+)
G96086 NA non-coding downstream 558416 16771969 ~ 16772170 (+)
G96088 NA non-coding downstream 664323 16877876 ~ 16878081 (+)
LOC120564959 LOC104946909,LOC103360792,LOC102294988,LOC101486556,LOC102197099 other upstream 576562 15523929 ~ 15632812 (+)
dennd1b NA other upstream 1285529 14810368 ~ 14923845 (+)
LOC120565380 NA other upstream 1505021 14689382 ~ 14704353 (+)
G95460 NA other upstream 1587961 14619358 ~ 14621413 (+)
LOC120564965 LOC102299696 other upstream 2809630 13390823 ~ 13399744 (+)
kcnn1b LOC104945110,LOC103355562 other downstream 76270 16289823 ~ 16301000 (+)
kdm4b kdm4b,LOC104945107,LOC108234360,LOC108412081 other downstream 106941 16320494 ~ 16376449 (+)
nppc nppc,LOC104932751,LOC103372810 other downstream 1642078 17855631 ~ 17859411 (+)
nmur1a LOC103368681,LOC104952433 other downstream 2433150 18646703 ~ 18665113 (+)
G96418 tsc22d2 other downstream 2569047 18782600 ~ 18785636 (+)

Expression


Co-expression Network