Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC120565515 |
| gene name | NA |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053120.1 |
| NCBI id | CM020917.1 |
| chromosome length | 41568296 |
| location | 20468553 ~ 20470747 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| id | name | namespace |
|---|---|---|
| GO:0090304 | nucleic acid metabolic process | biological_process |
| id | description |
|---|---|
| ko04110 | Cell cycle |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005640266.1 | True | 733 | lncRNA | 0.55 | 3 | 20468553 | 20470747 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| adgrl2a | adgrl2,LOC106923620 | coding | upstream | 211959 | 20156410 ~ 20256594 (+) |
| cth | cth | coding | upstream | 881908 | 19574855 ~ 19586645 (+) |
| LOC120565772 | srsf11,LOC103363396 | coding | upstream | 939059 | 19520942 ~ 19529494 (+) |
| fam43a | fam43a,LOC102785697 | coding | upstream | 1127497 | 19338866 ~ 19341056 (+) |
| htr2b | htr2b | coding | upstream | 1416585 | 19044010 ~ 19051968 (+) |
| samd13 | samd13,LOC103130842 | coding | downstream | 94228 | 20564975 ~ 20568112 (+) |
| dnase2b | dnase2b,LOC108234386,LOC107392715 | coding | downstream | 105776 | 20576523 ~ 20582264 (+) |
| LOC120565357 | NA | coding | downstream | 111759 | 20582506 ~ 20587615 (+) |
| rpf1 | rpf1 | coding | downstream | 117551 | 20588298 ~ 20595439 (+) |
| spata1 | spata1,LOC102789799 | coding | downstream | 127835 | 20598582 ~ 20605337 (+) |
| LOC120565226 | NA | non-coding | upstream | 179172 | 20266651 ~ 20289381 (+) |
| G96653 | NA | non-coding | upstream | 419336 | 20047879 ~ 20049217 (+) |
| LOC120565691 | NA | non-coding | upstream | 421181 | 20047018 ~ 20047372 (+) |
| G96648 | adgrl4 | non-coding | upstream | 466428 | 20000828 ~ 20002125 (+) |
| G96616 | NA | non-coding | upstream | 717181 | 19751120 ~ 19751372 (+) |
| G96692 | NA | non-coding | downstream | 4060 | 20474807 ~ 20485886 (+) |
| G96742 | NA | non-coding | downstream | 144185 | 20614932 ~ 20615202 (+) |
| G96753 | NA | non-coding | downstream | 200919 | 20671666 ~ 20674195 (+) |
| G96754 | ssx2ip | non-coding | downstream | 203510 | 20674257 ~ 20676737 (+) |
| G96758 | NA | non-coding | downstream | 230692 | 20701439 ~ 20701938 (+) |
| G96513 | NA | other | upstream | 936876 | 19530767 ~ 19531677 (+) |
| G96418 | tsc22d2 | other | upstream | 1682917 | 18782600 ~ 18785636 (+) |
| nmur1a | LOC103368681,LOC104952433 | other | upstream | 1803440 | 18646703 ~ 18665113 (+) |
| nppc | nppc,LOC104932751,LOC103372810 | other | upstream | 2609142 | 17855631 ~ 17859411 (+) |
| kdm4b | kdm4b,LOC104945107,LOC108234360,LOC108412081 | other | upstream | 4092104 | 16320494 ~ 16376449 (+) |
| prkacba | prkacb | other | downstream | 78252 | 20548999 ~ 20564824 (+) |
| LOC120565275 | ctxn1,LOC108166259,LOC106954365,LOC103138526,LOC104947303,LOC105353898 | other | downstream | 940589 | 21411336 ~ 21441558 (+) |
| lsm7 | lsm7,LOC102793261 | other | downstream | 1084147 | 21554894 ~ 21557731 (+) |
| G97093 | NA | other | downstream | 1220150 | 21690897 ~ 21782000 (+) |
| G97321 | NA | other | downstream | 1812899 | 22283646 ~ 22287272 (+) |
