LOC120565805


Basic Information

Item Value
gene id LOC120565805
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 13704367 ~ 13747072 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640289.1
ATATGCACTGGCTTACTCTGTGTTAAATTCTGCTGGAGCTATTTCCACAGTGTCTCTCTCCCCATCTACACACTACAAAAAAAGAAAGGCACGTCTGCATCAATCTGCTGTCACTTGTAAACAGCACGGGCACCATGATACTATGATAGAAGTGTTGTTGGAGGAGGGGATGATGAGGAAGATTAAGATGTCCATCTGTTGCCGACCAGTCAGCTTGGATCAGCGTGCAGAGCGACTGATTTGTGGTAACATCTGATTGCAGCGTCCAGGTGAATTGGAACCCCTCCACAGCTGCTGGGTCCAGTGCATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640289.1 True 311 lncRNA 0.48 3 13704367 13747072

Neighbor

gene id symbol gene type direction distance location
insl5a LOC104957723,LOC104925860,LOC103372744 coding upstream 288368 13413361 ~ 13415999 (+)
LOC120565922 NA coding upstream 335360 13367294 ~ 13369007 (+)
LOC120565910 NA coding upstream 345242 13356372 ~ 13359125 (+)
LOC120565057 NA coding upstream 369269 13328617 ~ 13335098 (+)
LOC120565891 NA coding upstream 383670 13317776 ~ 13320697 (+)
swt1 LOC102799620 coding downstream 49022 13796094 ~ 13820008 (+)
hmcn1 hmcn1 coding downstream 109962 13857034 ~ 13947979 (+)
ptgs2b ptgs2 coding downstream 248423 13995495 ~ 13999954 (+)
pdcb pdc,LOC104921827,LOC102780712 coding downstream 277683 14024755 ~ 14028859 (+)
tprb tpr coding downstream 287185 14034257 ~ 14065550 (+)
G95148 NA non-coding upstream 190302 13510193 ~ 13514065 (+)
G95139 NA non-coding upstream 217001 13487036 ~ 13487366 (+)
G95114 NA non-coding upstream 303435 13399830 ~ 13400932 (+)
LOC120564967 NA non-coding upstream 328699 13372444 ~ 13375668 (+)
G95040 NA non-coding upstream 557572 13146305 ~ 13146795 (+)
G95173 ivns1abp non-coding downstream 75781 13822853 ~ 13825269 (+)
G95177 ivns1abp non-coding downstream 78385 13825457 ~ 13828481 (+)
G95179 NA non-coding downstream 83778 13830850 ~ 13835258 (+)
G95236 arpc5,LOC104921830,LOC103367487,LOC103137250 non-coding downstream 206077 13953149 ~ 13954884 (+)
G95239 NA non-coding downstream 221859 13968931 ~ 13971139 (+)
LOC120564965 LOC102299696 other upstream 304623 13390823 ~ 13399744 (+)
LOC120564964 LOC102797871,LOC101481459,LOC102301033,LOC106675533,LOC102797273,LOC102300313,LOC102200286 other upstream 321620 13379398 ~ 13382747 (+)
LOC120565776 NA other upstream 362269 13335734 ~ 13342098 (+)
G95046 NA other upstream 483995 13173025 ~ 13220372 (+)
raver2 raver2 other upstream 603922 13005568 ~ 13100445 (+)
G95460 NA other downstream 872286 14619358 ~ 14621413 (+)
LOC120565380 NA other downstream 942310 14689382 ~ 14704353 (+)
dennd1b NA other downstream 1063296 14810368 ~ 14923845 (+)
LOC120564959 LOC104946909,LOC103360792,LOC102294988,LOC101486556,LOC102197099 other downstream 1776857 15523929 ~ 15632812 (+)
kcnn1b LOC104945110,LOC103355562 other downstream 2542751 16289823 ~ 16301000 (+)

Expression


Co-expression Network