LOC120565815


Basic Information

Item Value
gene id LOC120565815
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 22005775 ~ 22007353 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640290.1
TCTTATGAGGTGGGTGGGGGTGAATAACCAGTGATCAGTAAGGGTGGCCCTGATCTAAACATCTGATCTTTTCTCTGCCCttgtcctcttcttcctcctcctcctcttccaacTCTTTCTCCATGAACTTGTCCTGAGGTACATCCCAtgtcccttatttgatagctcctcgactctgtcctcggctgaaccggaagttgttctgtccctcctcagtgaaggccgtctcaaagctcttatttctgtcCTGAGGGCCGAGGAGCGAGCTTCGAGGAGGGAACACCTCGGAGACATAGCCGGTATCAGCCTTCCCTGAAGTTGTGCAGATCTCTCCCGTGactcctcggtgggagggactaagacgcgaggaagggaggcaagtggaggactcgaggaggcaatttaagcaaCATGAGATGCAGCTCTGGTTGTcgtcccctgcctctccctcctactccccttgctctctgtctattgtcgGCATCCACTGTTCGAagcagGGACTAAGGAACAAACGGAGACGTTCATACGTCTACGTGTAGGCAGCAAGCAGCTGTTTACCAGGGGGAGGGACACCACTGCGAACGGATATCGGCTTATTTTGGAGATGATGGGGATCGGAGGGAGGGTCTCCCACACCCAGGCCAAGAAGAAGTGGGACAACCTAAAAACGAAGTGGGAGATATTGAGATATTGCAGGAGTCCCTGCCTTATTGCCTCGATCCAAGGGGACAAACCAGGGCCAAGCGCCGCACAAGAGGTAGAGGAAGGGattgatgaggaggaggaggaggaggaggaggaggaggacaaggGAGAGAGTGGATCCATTCCTTCAACTCATCAAGGACGACATAAAATATCAGGGAGAGGCAGATGAGAGGAGGGAAGCAGAGGCCGAGGTCAAaa

Function

GO: NA

KEGG:

id description
ko04113 Meiosis - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640290.1 True 909 lncRNA 0.54 3 22005775 22007353

Neighbor

gene id symbol gene type direction distance location
LOC120565766 LOC107080871,LOC107654361 coding upstream 3116 22000197 ~ 22002659 (+)
LOC120565765 NA coding upstream 5678 21997919 ~ 22000097 (+)
LOC120565695 NA coding upstream 26217 21967192 ~ 21979558 (+)
tnfaip8l1 tnfaip8l1,LOC104918070,LOC103363933 coding upstream 43227 21946176 ~ 21962548 (+)
ncln ncln,LOC102776228 coding upstream 96577 21895470 ~ 21909198 (+)
zfr2 zfr2 coding downstream 46004 22053357 ~ 22079019 (+)
matk matk,LOC102798474 coding downstream 71839 22079192 ~ 22090850 (+)
rx1 LOC101073544,LOC104924617,LOC100705124,LOC102200154,LOC101467495,LOC102301254 coding downstream 96616 22103969 ~ 22112923 (+)
LOC120565906 LOC104924615 coding downstream 111641 22118994 ~ 22124092 (+)
haus5 haus5,LOC102794657 coding downstream 117171 22124524 ~ 22134337 (+)
G97181 NA non-coding upstream 8032 21997413 ~ 21997743 (+)
G97170 cope non-coding upstream 61214 21941105 ~ 21944561 (+)
G97096 NA non-coding upstream 261094 21743413 ~ 21744681 (+)
G97064 NA non-coding upstream 329426 21658550 ~ 21676349 (+)
G97009 NA non-coding upstream 548975 21368118 ~ 21456800 (+)
G97190 NA non-coding downstream 26444 22033797 ~ 22035674 (+)
G97263 NA non-coding downstream 84036 22091389 ~ 22093374 (+)
G97295 NA non-coding downstream 148758 22156111 ~ 22157958 (+)
G97297 NA non-coding downstream 150704 22158057 ~ 22174393 (+)
G97335 NA non-coding downstream 306295 22313648 ~ 22316358 (+)
G97093 NA other upstream 223775 21690897 ~ 21782000 (+)
lsm7 lsm7,LOC102793261 other upstream 448044 21554894 ~ 21557731 (+)
LOC120565275 ctxn1,LOC108166259,LOC106954365,LOC103138526,LOC104947303,LOC105353898 other upstream 564217 21411336 ~ 21441558 (+)
prkacba prkacb other upstream 1440951 20548999 ~ 20564824 (+)
G96513 NA other upstream 2474098 19530767 ~ 19531677 (+)
G97321 NA other downstream 276293 22283646 ~ 22287272 (+)
LOC120565764 LOC103367403 other downstream 478158 22485511 ~ 22491235 (+)
soat1 soat1,LOC102796196 other downstream 485604 22492957 ~ 22501015 (+)
LOC120566218 NA other downstream 564401 22571754 ~ 22576548 (+)
LOC120566227 NA other downstream 565116 22572469 ~ 22572551 (+)

Expression


Co-expression Network