G103959


Basic Information

Item Value
gene id G103959
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 8180945 ~ 8181255 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU139748
cagataacgtccataataataggattttgggttagattttttgacagttttccgtggttatgaggggtaatatgagagagaaatttggtgatgattgatcattgtttaggtacattcaaccacgttaagctttttccataggctctaatgaagcagaaacgcttaatgtcagataatgtccataataattggactttgggttcgagtttttgacagttttcagtggttatgaggagcaatatgagagagaaatttggtaatcattgatcattgtttaggtacattaaaccacgttaagctttttcctcgcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU139748 True 311 lncRNA 0.36 1 8180945 8181255

Neighbor

gene id symbol gene type direction distance location
LOC120567357 NA coding upstream 42282 8135324 ~ 8138663 (+)
LOC120567399 NA coding upstream 58294 8121570 ~ 8122651 (+)
trnam-cau_24 NA coding upstream 969231 7211642 ~ 7211714 (+)
trnam-cau_23 NA coding upstream 970396 7210474 ~ 7210549 (+)
trnam-cau_22 NA coding upstream 972803 7208070 ~ 7208142 (+)
LOC120567367 NA coding downstream 326690 8507945 ~ 8519409 (+)
tmem129 tmem129 coding downstream 1084607 9265862 ~ 9272872 (+)
LOC120567422 NA coding downstream 1751880 9933135 ~ 9934238 (+)
LOC120566687 NA coding downstream 3375374 11556629 ~ 11557525 (+)
LOC120566361 NA coding downstream 3422272 11603527 ~ 11605073 (+)
G103907 NA non-coding upstream 145727 8035011 ~ 8035218 (+)
G103902 NA non-coding upstream 156509 8024223 ~ 8024436 (+)
G103897 LOC104947167 non-coding upstream 161983 8018081 ~ 8018962 (+)
LOC120566970 NA non-coding upstream 183796 7995546 ~ 7997149 (+)
G103887 NA non-coding upstream 207097 7973384 ~ 7973848 (+)
G103966 NA non-coding downstream 114650 8295905 ~ 8296109 (+)
G103967 NA non-coding downstream 144987 8326242 ~ 8327130 (+)
G103977 NA non-coding downstream 180378 8361633 ~ 8362364 (+)
G103980 NA non-coding downstream 208716 8389971 ~ 8390476 (+)
LOC120567375 NA non-coding downstream 233675 8414930 ~ 8417931 (+)
G103836 NA other upstream 537762 7621638 ~ 7643183 (+)
trnam-cau_9 NA other upstream 1324691 6856182 ~ 6856254 (+)
irf2 irf2 other upstream 1990381 6177996 ~ 6190564 (+)
G103305 NA other upstream 4111331 4068811 ~ 4069614 (+)
smad5 LOC103363483,LOC104920560,LOC103391130,LOC101064562 other upstream 4308112 3860635 ~ 3872833 (+)
LOC120567362 NA other downstream 158161 8339416 ~ 8346534 (+)
LOC120567404 LOC104951845 other downstream 293361 8474616 ~ 8476449 (+)
G104301 NA other downstream 1736617 9917872 ~ 9918315 (+)
fbxo38 fbxo38,LOC104946725 other downstream 3469262 11650517 ~ 11686377 (+)
LOC120567273 stox2,LOC102298495,LOC100710800,LOC103356674 other downstream 3596760 11778015 ~ 11850403 (+)

Expression


Co-expression Network