LOC120567386


Basic Information

Item Value
gene id LOC120567386
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 6554852 ~ 6556324 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814343.1
ATGCTGGAGGATGTGGACGGGGGCGAGGAAGAGGATGAGGGCTTCGAGGAAGACCAACCACCTGACCTCACGGTGTCAGGTCTCCTTGATGATCTTAGCGTCTCAACACAGCCTATCTGCTCCTCCCTGACTGCCTCCTCCATGCCTTCTGCCTCCTCCCTGGCTGCTCCCATCCAGCCTGCTGCCTCCACCATGGCTGCTCCCATCCAGCCTGCTGCCTCCTCCCTGGCTGCTCCCATCCAGCCTTCTGCCTCCTCCCTGGCTGCTCCCATCCAGCCTGCTGCCTCCTCACTGGCTGCTCCCATCCAGCCTGCTGCCTCCACCATGGCTGCTCCCATCCAGCCTGCTGCCTCCAACCTGGCTGCTCCCATCCAGCCTGCTGCCTCCACCCTGGCTGCTCCCATCCAGCCTGCTGCCTCCACCCTGGCTGCTCCCATCCAGCCTGCTGCTTCCTCACTGGCTGCTCCCATCCAGCCTGCTGCCTCCAACCTGGCTGCTCCCATCCAGCCTGCTGCCTCCTCACTGGCTGCTCCCATCCAGCCTGCTGCCTCCACCATGGCTGCTCCCATCCAGCCTGCTGCCTCCTCCCTGGCTGCTCCCATCCAGCCTTCTGCCTCCTCACTGGCTGCTCCCATCCAGCCTGCTGCCTCCTCCCTGCCTGCTGCCTCCACCCTGGCTGCGGAAGCATCTTGGGCTGTGGATGAGTCCGGTGTGCCAGGCATGGACAGAGTGGACAGCTTGGCAGAATATCTAGTGGAGCTGCGCAACAAGCCCTCACTAGTCCTCACCAACCAGCAGGTGAGCGATATTGTCATTCTGTGGCAGAACCTGCTAGACTTTGACAAGCAGCAGATTGTCTTTTCTGCCAGACACCAGACCAGGCTGGTCACAGGGAGGTTCAGGACTCAAAAGAACAGGCAGGAGTTCACTCCAGGGGTGAGAGGAGTTCCCAAGAAGAGATCCAGATGGGACCTTATCCTGGAGGACTATAGGCGAATCAGGCAGCGCATTCTGGCCAATGGGGACGTTATGCAGCAGACCACCATGCAGCTGGTGGACGTGAGCCATACCACCCTGGTGAAGTGGCACAATAAGAGGGTGAAGAGGCAGGACATCGCAGTGGTGAAGCAGGGACTGGACCTGCCGCCTGTCTGTGGCGGCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814343.1 True 1164 mRNA 0.61 4 6554852 6556324

Neighbor

gene id symbol gene type direction distance location
LOC120567385 LOC107574244 coding upstream 2245 6547927 ~ 6552607 (+)
trnaf-gaa_32 NA coding upstream 5014 6549766 ~ 6549838 (+)
trnaf-gaa_31 NA coding upstream 5533 6549247 ~ 6549319 (+)
trnaf-gaa_30 NA coding upstream 6051 6548729 ~ 6548801 (+)
LOC120566943 NA coding upstream 386320 6156479 ~ 6168532 (+)
trnaf-gaa_33 NA coding downstream 1555 6557879 ~ 6557951 (+)
trnaf-gaa_34 NA coding downstream 2946 6559270 ~ 6559342 (+)
trnad-guc_1 NA coding downstream 3728 6560052 ~ 6560215 (+)
trnaf-gaa_35 NA coding downstream 4338 6560662 ~ 6560734 (+)
trnaf-gaa_36 NA coding downstream 4857 6561181 ~ 6561253 (+)
LOC120566291 NA non-coding upstream 23 6554161 ~ 6554829 (+)
trnaf-gaa_29 NA non-coding upstream 7268 6547510 ~ 6547584 (+)
trnaf-gaa_28 NA non-coding upstream 8486 6546294 ~ 6546366 (+)
trnaf-gaa_27 NA non-coding upstream 9097 6545683 ~ 6545755 (+)
trnaf-gaa_26 NA non-coding upstream 9616 6545164 ~ 6545236 (+)
G103744 NA non-coding downstream 98648 6654972 ~ 6655228 (+)
G103752 NA non-coding downstream 157629 6713953 ~ 6714209 (+)
G103753 NA non-coding downstream 164926 6721250 ~ 6721597 (+)
G103788 NA non-coding downstream 558957 7115281 ~ 7115562 (+)
G103796 NA non-coding downstream 673151 7229475 ~ 7229888 (+)
irf2 irf2 other upstream 364288 6177996 ~ 6190564 (+)
G103305 NA other upstream 2485238 4068811 ~ 4069614 (+)
smad5 LOC103363483,LOC104920560,LOC103391130,LOC101064562 other upstream 2682019 3860635 ~ 3872833 (+)
G103034 NA other upstream 3039135 3514023 ~ 3515717 (+)
zgc:110843 cisd1 other upstream 3303221 3247545 ~ 3251631 (+)
trnam-cau_9 NA other downstream 299858 6856182 ~ 6856254 (+)
G103836 NA other downstream 1065314 7621638 ~ 7643183 (+)
LOC120567362 NA other downstream 1783092 8339416 ~ 8346534 (+)
LOC120567404 LOC104951845 other downstream 1918292 8474616 ~ 8476449 (+)
G104301 NA other downstream 3361548 9917872 ~ 9918315 (+)

Expression


Co-expression Network